Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.9□□□□□ -1.78
TMEM88BA6NKF7 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
TMEM88BA6NKF7 AL159152.1-201ENST00000635019 2587 ntBASIC3.9□□□□□ -1.78
TMEM88BA6NKF7 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC3.9□□□□□ -1.78
TMEM88BA6NKF7 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
TMEM88BA6NKF7 Y_RNA.233-201ENST00000364407 101 ntBASIC3.9□□□□□ -1.79
TMEM88BA6NKF7 Y_RNA.341-201ENST00000365341 102 ntBASIC3.9□□□□□ -1.79
TMEM88BA6NKF7 Y_RNA.435-201ENST00000384095 112 ntBASIC3.9□□□□□ -1.79
TMEM88BA6NKF7 RNU6-975P-201ENST00000384296 105 ntBASIC3.9□□□□□ -1.79
TMEM88BA6NKF7 RNA5SP508-201ENST00000411327 119 ntBASIC3.9□□□□□ -1.79
TMEM88BA6NKF7 AC008134.1-201ENST00000420943 193 ntBASIC3.9□□□□□ -1.79
TMEM88BA6NKF7 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC3.9□□□□□ -1.79
TMEM88BA6NKF7 RNU2-34P-201ENST00000516534 121 ntBASIC3.9□□□□□ -1.79
TMEM88BA6NKF7 AC022616.8-201ENST00000533569 253 ntBASIC3.9□□□□□ -1.79
TMEM88BA6NKF7 AL133393.1-201ENST00000603277 287 ntBASIC3.9□□□□□ -1.79
TMEM88BA6NKF7 AL449363.1-201ENST00000617815 186 ntBASIC3.9□□□□□ -1.79
TMEM88BA6NKF7 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.79
TMEM88BA6NKF7 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC3.9□□□□□ -1.79
TMEM88BA6NKF7 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.9□□□□□ -1.79
TMEM88BA6NKF7 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC3.9□□□□□ -1.79
TMEM88BA6NKF7 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.79
TMEM88BA6NKF7 MAPK10-253ENST00000641010 4072 ntBASIC3.9□□□□□ -1.79
TMEM88BA6NKF7 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
TMEM88BA6NKF7 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC3.89□□□□□ -1.79
TMEM88BA6NKF7 RNU2-32P-201ENST00000411193 191 ntBASIC3.89□□□□□ -1.79
TMEM88BA6NKF7 AL159169.1-201ENST00000421119 127 ntBASIC3.89□□□□□ -1.79
TMEM88BA6NKF7 RNU7-170P-201ENST00000459303 61 ntBASIC3.89□□□□□ -1.79
TMEM88BA6NKF7 RNU6-861P-201ENST00000516745 106 ntBASIC3.89□□□□□ -1.79
TMEM88BA6NKF7 RN7SKP209-201ENST00000516888 304 ntBASIC3.89□□□□□ -1.79
TMEM88BA6NKF7 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.89□□□□□ -1.79
TMEM88BA6NKF7 AL356280.1-201ENST00000603614 379 ntBASIC3.89□□□□□ -1.79
TMEM88BA6NKF7 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.89□□□□□ -1.79
TMEM88BA6NKF7 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
TMEM88BA6NKF7 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC3.88□□□□□ -1.79
TMEM88BA6NKF7 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC3.88□□□□□ -1.79
TMEM88BA6NKF7 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
TMEM88BA6NKF7 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
TMEM88BA6NKF7 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC3.88□□□□□ -1.79
TMEM88BA6NKF7 RNU6-923P-201ENST00000364753 107 ntBASIC3.88□□□□□ -1.79
TMEM88BA6NKF7 Y_RNA.368-201ENST00000365547 113 ntBASIC3.88□□□□□ -1.79
TMEM88BA6NKF7 RNU6ATAC15P-201ENST00000408279 121 ntBASIC3.88□□□□□ -1.79
TMEM88BA6NKF7 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC3.88□□□□□ -1.79
TMEM88BA6NKF7 RNU6-221P-201ENST00000459541 99 ntBASIC3.88□□□□□ -1.79
TMEM88BA6NKF7 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC3.88□□□□□ -1.79
TMEM88BA6NKF7 SNORA48.11-201ENST00000517015 89 ntBASIC3.88□□□□□ -1.79
TMEM88BA6NKF7 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.88□□□□□ -1.79
TMEM88BA6NKF7 AL008718.3-201ENST00000610217 321 ntBASIC3.88□□□□□ -1.79
TMEM88BA6NKF7 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC3.88□□□□□ -1.79
TMEM88BA6NKF7 U6.106-201ENST00000636360 105 ntBASIC3.88□□□□□ -1.79
TMEM88BA6NKF7 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.88□□□□□ -1.79
TMEM88BA6NKF7 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
TMEM88BA6NKF7 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC3.88□□□□□ -1.79
TMEM88BA6NKF7 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC3.87□□□□□ -1.79
TMEM88BA6NKF7 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
TMEM88BA6NKF7 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC3.87□□□□□ -1.79
TMEM88BA6NKF7 RNU6-899P-201ENST00000363947 107 ntBASIC3.87□□□□□ -1.79
TMEM88BA6NKF7 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC3.87□□□□□ -1.79
TMEM88BA6NKF7 RNU6-47P-201ENST00000383866 107 ntBASIC3.87□□□□□ -1.79
TMEM88BA6NKF7 MIR873-201ENST00000401120 77 ntBASIC3.87□□□□□ -1.79
TMEM88BA6NKF7 RNA5SP184-201ENST00000411071 108 ntBASIC3.87□□□□□ -1.79
TMEM88BA6NKF7 AC016925.1-201ENST00000458303 298 ntBASIC3.87□□□□□ -1.79
TMEM88BA6NKF7 RNA5SP490-201ENST00000517141 136 ntBASIC3.87□□□□□ -1.79
TMEM88BA6NKF7 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC3.87□□□□□ -1.79
TMEM88BA6NKF7 MIR4319-201ENST00000577285 85 ntBASIC3.87□□□□□ -1.79
TMEM88BA6NKF7 MIR4524B-201ENST00000581569 115 ntBASIC3.87□□□□□ -1.79
TMEM88BA6NKF7 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
TMEM88BA6NKF7 AC023043.3-201ENST00000593113 385 ntBASIC3.87□□□□□ -1.79
TMEM88BA6NKF7 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
TMEM88BA6NKF7 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC3.87□□□□□ -1.79
TMEM88BA6NKF7 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC3.87□□□□□ -1.79
TMEM88BA6NKF7 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.86□□□□□ -1.79
TMEM88BA6NKF7 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC3.86□□□□□ -1.79
TMEM88BA6NKF7 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC3.86□□□□□ -1.79
TMEM88BA6NKF7 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
TMEM88BA6NKF7 RNU6-682P-201ENST00000363843 106 ntBASIC3.86□□□□□ -1.79
TMEM88BA6NKF7 Y_RNA.361-201ENST00000365515 120 ntBASIC3.86□□□□□ -1.79
TMEM88BA6NKF7 RNU4-17P-201ENST00000365598 141 ntBASIC3.86□□□□□ -1.79
TMEM88BA6NKF7 RNU6-1235P-201ENST00000384559 107 ntBASIC3.86□□□□□ -1.79
TMEM88BA6NKF7 MIR95-201ENST00000385072 81 ntBASIC3.86□□□□□ -1.79
TMEM88BA6NKF7 RNU6-763P-201ENST00000390865 106 ntBASIC3.86□□□□□ -1.79
TMEM88BA6NKF7 RNU6-918P-201ENST00000391219 106 ntBASIC3.86□□□□□ -1.79
TMEM88BA6NKF7 RNU6-493P-201ENST00000391321 108 ntBASIC3.86□□□□□ -1.79
TMEM88BA6NKF7 RNU4-61P-201ENST00000411243 107 ntBASIC3.86□□□□□ -1.79
TMEM88BA6NKF7 RNU6-57P-201ENST00000411348 103 ntBASIC3.86□□□□□ -1.79
TMEM88BA6NKF7 EEF1A1P41-201ENST00000414667 207 ntBASIC3.86□□□□□ -1.79
TMEM88BA6NKF7 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC3.86□□□□□ -1.79
TMEM88BA6NKF7 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC3.86□□□□□ -1.79
TMEM88BA6NKF7 EEF1B2P7-201ENST00000451177 676 ntBASIC3.86□□□□□ -1.79
TMEM88BA6NKF7 RNU6-498P-201ENST00000459468 107 ntBASIC3.86□□□□□ -1.79
TMEM88BA6NKF7 AC090515.1-201ENST00000465295 476 ntBASIC3.86□□□□□ -1.79
TMEM88BA6NKF7 AC010598.1-201ENST00000510378 103 ntBASIC3.86□□□□□ -1.79
TMEM88BA6NKF7 RNA5SP367-201ENST00000516557 118 ntBASIC3.86□□□□□ -1.79
TMEM88BA6NKF7 NDUFB9P3-201ENST00000521269 501 ntBASIC3.86□□□□□ -1.79
TMEM88BA6NKF7 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC3.86□□□□□ -1.79
TMEM88BA6NKF7 AL355297.2-201ENST00000604792 129 ntBASIC3.86□□□□□ -1.79
TMEM88BA6NKF7 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
TMEM88BA6NKF7 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.86□□□□□ -1.79
TMEM88BA6NKF7 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.86□□□□□ -1.79
TMEM88BA6NKF7 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
TMEM88BA6NKF7 AC092435.3-201ENST00000565538 3654 ntBASIC3.85□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 168.2 ms