Protein–RNA interactions for Protein: Q9Y4C0

NRXN3, Neurexin-3, humanhuman

Predictions only

Length 1,643 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NRXN3Q9Y4C0 AC007327.1-201ENST00000447461 264 ntBASIC-1.33□□□□□ -2.62
NRXN3Q9Y4C0 AC016903.2-201ENST00000456384 326 ntTSL 3 BASIC-1.33□□□□□ -2.62
NRXN3Q9Y4C0 SCARNA18B-201ENST00000458806 135 ntBASIC-1.33□□□□□ -2.62
NRXN3Q9Y4C0 AC099520.1-205ENST00000524083 316 ntTSL 3 BASIC-1.33□□□□□ -2.62
NRXN3Q9Y4C0 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC-1.33□□□□□ -2.62
NRXN3Q9Y4C0 UBE2Q2P8-201ENST00000560644 102 ntBASIC-1.33□□□□□ -2.62
NRXN3Q9Y4C0 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC-1.33□□□□□ -2.62
NRXN3Q9Y4C0 Z99289.3-201ENST00000605586 594 ntBASIC-1.33□□□□□ -2.62
NRXN3Q9Y4C0 AC007014.2-201ENST00000615581 479 ntBASIC-1.33□□□□□ -2.62
NRXN3Q9Y4C0 MIR1246-201ENST00000636535 73 ntBASIC-1.33□□□□□ -2.62
NRXN3Q9Y4C0 RNY4P27-201ENST00000363341 96 ntBASIC-1.33□□□□□ -2.62
NRXN3Q9Y4C0 SNORD115-42-201ENST00000364273 82 ntBASIC-1.33□□□□□ -2.62
NRXN3Q9Y4C0 RNU6-1104P-201ENST00000384723 104 ntBASIC-1.33□□□□□ -2.62
NRXN3Q9Y4C0 SNORD41-201ENST00000386967 70 ntBASIC-1.33□□□□□ -2.62
NRXN3Q9Y4C0 AC010385.1-201ENST00000412374 256 ntBASIC-1.33□□□□□ -2.62
NRXN3Q9Y4C0 USP9YP22-201ENST00000438971 294 ntBASIC-1.33□□□□□ -2.62
NRXN3Q9Y4C0 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC-1.33□□□□□ -2.62
NRXN3Q9Y4C0 RNU2-46P-201ENST00000517038 113 ntBASIC-1.33□□□□□ -2.62
NRXN3Q9Y4C0 RNU4-76P-201ENST00000364509 141 ntBASIC-1.34□□□□□ -2.62
NRXN3Q9Y4C0 DEFB130D-201ENST00000426866 237 ntBASIC-1.34□□□□□ -2.62
NRXN3Q9Y4C0 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC-1.34□□□□□ -2.62
NRXN3Q9Y4C0 RNU6-1232P-201ENST00000516299 86 ntBASIC-1.34□□□□□ -2.62
NRXN3Q9Y4C0 MIR4742-201ENST00000581069 85 ntBASIC-1.34□□□□□ -2.62
NRXN3Q9Y4C0 MIR6514-201ENST00000622549 70 ntBASIC-1.34□□□□□ -2.62
NRXN3Q9Y4C0 TTK-211ENST00000627129 240 ntTSL 5 BASIC-1.34□□□□□ -2.62
NRXN3Q9Y4C0 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC-1.34□□□□□ -2.62
NRXN3Q9Y4C0 AC017104.5-201ENST00000637647 639 ntBASIC-1.34□□□□□ -2.62
NRXN3Q9Y4C0 RNU6-1097P-201ENST00000363586 107 ntBASIC-1.35□□□□□ -2.63
NRXN3Q9Y4C0 Y_RNA.562-201ENST00000384695 113 ntBASIC-1.35□□□□□ -2.63
NRXN3Q9Y4C0 DNAJA1P2-201ENST00000421360 1197 ntBASIC-1.35□□□□□ -2.63
NRXN3Q9Y4C0 SRRM1P2-201ENST00000464531 1192 ntBASIC-1.35□□□□□ -2.63
NRXN3Q9Y4C0 RNU6-1183P-201ENST00000517054 60 ntBASIC-1.35□□□□□ -2.63
NRXN3Q9Y4C0 RNA5SP66-201ENST00000517178 101 ntBASIC-1.35□□□□□ -2.63
NRXN3Q9Y4C0 HIGD1AP6-201ENST00000521833 279 ntBASIC-1.35□□□□□ -2.63
NRXN3Q9Y4C0 BCRP9-201ENST00000605312 388 ntBASIC-1.35□□□□□ -2.63
NRXN3Q9Y4C0 AC063943.3-201ENST00000615562 356 ntBASIC-1.35□□□□□ -2.63
NRXN3Q9Y4C0 FER-210ENST00000628534 558 ntTSL 5 BASIC-1.35□□□□□ -2.63
NRXN3Q9Y4C0 SCARNA4-201ENST00000629045 128 ntBASIC-1.35□□□□□ -2.63
NRXN3Q9Y4C0 U6.107-201ENST00000637108 79 ntBASIC-1.35□□□□□ -2.63
NRXN3Q9Y4C0 snoU2_19.1-201ENST00000362361 80 ntBASIC-1.36□□□□□ -2.63
NRXN3Q9Y4C0 MIR204-201ENST00000385200 110 ntBASIC-1.36□□□□□ -2.63
NRXN3Q9Y4C0 MIR873-201ENST00000401120 77 ntBASIC-1.36□□□□□ -2.63
NRXN3Q9Y4C0 RPS20P2-201ENST00000402520 389 ntBASIC-1.36□□□□□ -2.63
NRXN3Q9Y4C0 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC-1.36□□□□□ -2.63
NRXN3Q9Y4C0 AC244250.2-201ENST00000418731 148 ntBASIC-1.36□□□□□ -2.63
NRXN3Q9Y4C0 AL451054.2-201ENST00000420896 202 ntBASIC-1.36□□□□□ -2.63
NRXN3Q9Y4C0 AL365184.2-201ENST00000431139 435 ntBASIC-1.36□□□□□ -2.63
NRXN3Q9Y4C0 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC-1.36□□□□□ -2.63
NRXN3Q9Y4C0 RNU6-1007P-201ENST00000516586 107 ntBASIC-1.36□□□□□ -2.63
NRXN3Q9Y4C0 AC140658.3-201ENST00000567603 271 ntBASIC-1.36□□□□□ -2.63
NRXN3Q9Y4C0 AC090186.1-201ENST00000605991 572 ntBASIC-1.36□□□□□ -2.63
NRXN3Q9Y4C0 RNU6-438P-201ENST00000365561 103 ntBASIC-1.37□□□□□ -2.63
NRXN3Q9Y4C0 PSMA6P3-201ENST00000428242 164 ntBASIC-1.37□□□□□ -2.63
NRXN3Q9Y4C0 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC-1.37□□□□□ -2.63
NRXN3Q9Y4C0 OR6C5P-201ENST00000452388 923 ntBASIC-1.37□□□□□ -2.63
NRXN3Q9Y4C0 AL353752.1-201ENST00000454946 260 ntBASIC-1.37□□□□□ -2.63
NRXN3Q9Y4C0 MTCO3P28-201ENST00000513351 515 ntBASIC-1.37□□□□□ -2.63
NRXN3Q9Y4C0 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC-1.37□□□□□ -2.63
NRXN3Q9Y4C0 Y_RNA.484-201ENST00000384389 103 ntBASIC-1.37□□□□□ -2.63
NRXN3Q9Y4C0 DEFB133-201ENST00000398721 186 ntAPPRIS P1 TSL 1 (best) BASIC-1.37□□□□□ -2.63
NRXN3Q9Y4C0 FCF1P9-201ENST00000412546 282 ntBASIC-1.37□□□□□ -2.63
NRXN3Q9Y4C0 MTCO1P5-201ENST00000433573 344 ntBASIC-1.37□□□□□ -2.63
NRXN3Q9Y4C0 AC107401.1-201ENST00000503426 685 ntBASIC-1.37□□□□□ -2.63
NRXN3Q9Y4C0 RNU6-840P-201ENST00000517275 65 ntBASIC-1.37□□□□□ -2.63
NRXN3Q9Y4C0 SNORD39.3-201ENST00000584451 71 ntBASIC-1.37□□□□□ -2.63
NRXN3Q9Y4C0 AL929325.1-201ENST00000603096 117 ntBASIC-1.37□□□□□ -2.63
NRXN3Q9Y4C0 AP000942.4-201ENST00000604811 241 ntBASIC-1.37□□□□□ -2.63
NRXN3Q9Y4C0 Y_RNA.86-201ENST00000363020 111 ntBASIC-1.38□□□□□ -2.63
NRXN3Q9Y4C0 RNU6-57P-201ENST00000411348 103 ntBASIC-1.38□□□□□ -2.63
NRXN3Q9Y4C0 AL133217.1-201ENST00000450980 425 ntBASIC-1.38□□□□□ -2.63
NRXN3Q9Y4C0 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC-1.38□□□□□ -2.63
NRXN3Q9Y4C0 MIR5591-201ENST00000578248 65 ntBASIC-1.38□□□□□ -2.63
NRXN3Q9Y4C0 MIR4770-201ENST00000579149 58 ntBASIC-1.38□□□□□ -2.63
NRXN3Q9Y4C0 AC100830.2-201ENST00000581636 240 ntBASIC-1.38□□□□□ -2.63
NRXN3Q9Y4C0 MIR6507-201ENST00000613630 70 ntBASIC-1.38□□□□□ -2.63
NRXN3Q9Y4C0 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC-1.39□□□□□ -2.63
NRXN3Q9Y4C0 MTCO3P1-205ENST00000422088 832 ntBASIC-1.39□□□□□ -2.63
NRXN3Q9Y4C0 AL590135.1-201ENST00000422215 156 ntBASIC-1.39□□□□□ -2.63
NRXN3Q9Y4C0 AC019205.3-201ENST00000424573 156 ntBASIC-1.39□□□□□ -2.63
NRXN3Q9Y4C0 AC016700.2-201ENST00000446011 156 ntBASIC-1.39□□□□□ -2.63
NRXN3Q9Y4C0 AC015911.1-201ENST00000495111 156 ntBASIC-1.39□□□□□ -2.63
NRXN3Q9Y4C0 AC234772.3-201ENST00000602277 528 ntBASIC-1.39□□□□□ -2.63
NRXN3Q9Y4C0 U6.99-201ENST00000637524 83 ntBASIC-1.39□□□□□ -2.63
NRXN3Q9Y4C0 Y_RNA.55-201ENST00000362797 102 ntBASIC-1.4□□□□□ -2.63
NRXN3Q9Y4C0 RNU6-187P-201ENST00000384139 106 ntBASIC-1.4□□□□□ -2.63
NRXN3Q9Y4C0 AC009468.1-201ENST00000412800 437 ntTSL 3 BASIC-1.4□□□□□ -2.63
NRXN3Q9Y4C0 MTCO3P41-201ENST00000414801 328 ntBASIC-1.4□□□□□ -2.63
NRXN3Q9Y4C0 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC-1.4□□□□□ -2.63
NRXN3Q9Y4C0 AL356583.2-201ENST00000426536 280 ntBASIC-1.4□□□□□ -2.63
NRXN3Q9Y4C0 AC015724.1-201ENST00000478577 156 ntBASIC-1.4□□□□□ -2.63
NRXN3Q9Y4C0 MTND2P33-201ENST00000506452 1031 ntBASIC-1.4□□□□□ -2.63
NRXN3Q9Y4C0 AC107027.2-201ENST00000512197 115 ntBASIC-1.4□□□□□ -2.63
NRXN3Q9Y4C0 LINC02358-201ENST00000514413 465 ntTSL 5 BASIC-1.4□□□□□ -2.63
NRXN3Q9Y4C0 SCARNA11.2-201ENST00000517183 154 ntBASIC-1.4□□□□□ -2.63
NRXN3Q9Y4C0 DEFB130C-202ENST00000530001 230 ntBASIC-1.4□□□□□ -2.63
NRXN3Q9Y4C0 MTND5P17-201ENST00000418405 1603 ntBASIC-1.4□□□□□ -2.63
NRXN3Q9Y4C0 RNA5SP482-201ENST00000391269 118 ntBASIC-1.4□□□□□ -2.63
NRXN3Q9Y4C0 LARP1BP3-201ENST00000437229 869 ntBASIC-1.4□□□□□ -2.63
NRXN3Q9Y4C0 MTND2P7-201ENST00000521337 640 ntBASIC-1.4□□□□□ -2.63
NRXN3Q9Y4C0 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC-1.4□□□□□ -2.63
Retrieved 100 of 98,524 protein–RNA pairs in 929 ms