Protein–RNA interactions for Protein: Q15915

ZIC1, Zinc finger protein ZIC 1, humanhuman

Predictions only

Length 447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC1Q15915 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
ZIC1Q15915 MTND5P9-201ENST00000503854 1755 ntBASIC1.62□□□□□ -2.15
ZIC1Q15915 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC1.62□□□□□ -2.15
ZIC1Q15915 Y_RNA.248-201ENST00000364501 109 ntBASIC1.62□□□□□ -2.15
ZIC1Q15915 RNU4-9P-201ENST00000364951 139 ntBASIC1.62□□□□□ -2.15
ZIC1Q15915 RNU6-482P-201ENST00000391068 107 ntBASIC1.62□□□□□ -2.15
ZIC1Q15915 RNA5SP501-201ENST00000410990 112 ntBASIC1.62□□□□□ -2.15
ZIC1Q15915 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC1.62□□□□□ -2.15
ZIC1Q15915 AL158823.1-201ENST00000418441 478 ntBASIC1.62□□□□□ -2.15
ZIC1Q15915 AC139712.2-201ENST00000424302 339 ntBASIC1.62□□□□□ -2.15
ZIC1Q15915 MTCO3P46-201ENST00000425787 232 ntBASIC1.62□□□□□ -2.15
ZIC1Q15915 Z82188.1-201ENST00000436709 154 ntBASIC1.62□□□□□ -2.15
ZIC1Q15915 AC004386.2-201ENST00000441858 148 ntBASIC1.62□□□□□ -2.15
ZIC1Q15915 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC1.62□□□□□ -2.15
ZIC1Q15915 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC1.62□□□□□ -2.15
ZIC1Q15915 PPP1R2P5-201ENST00000457256 603 ntBASIC1.62□□□□□ -2.15
ZIC1Q15915 RNU1-131P-201ENST00000458943 161 ntBASIC1.62□□□□□ -2.15
ZIC1Q15915 FO393415.2-201ENST00000480085 343 ntBASIC1.62□□□□□ -2.15
ZIC1Q15915 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC1.62□□□□□ -2.15
ZIC1Q15915 Y_RNA.682-201ENST00000516457 100 ntBASIC1.62□□□□□ -2.15
ZIC1Q15915 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.62□□□□□ -2.15
ZIC1Q15915 AP003033.1-201ENST00000527244 415 ntBASIC1.62□□□□□ -2.15
ZIC1Q15915 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC1.62□□□□□ -2.15
ZIC1Q15915 AC024614.2-201ENST00000577584 372 ntBASIC1.62□□□□□ -2.15
ZIC1Q15915 CYP2C61P-201ENST00000604072 290 ntBASIC1.62□□□□□ -2.15
ZIC1Q15915 AC012493.3-201ENST00000604494 112 ntBASIC1.62□□□□□ -2.15
ZIC1Q15915 TEX41-243ENST00000614173 190 ntTSL 5 BASIC1.62□□□□□ -2.15
ZIC1Q15915 TCL6_2.1-201ENST00000615162 119 ntBASIC1.62□□□□□ -2.15
ZIC1Q15915 MIR6128-201ENST00000615528 109 ntBASIC1.62□□□□□ -2.15
ZIC1Q15915 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC1.62□□□□□ -2.15
ZIC1Q15915 AL133216.2-202ENST00000634512 349 ntBASIC1.62□□□□□ -2.15
ZIC1Q15915 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC1.61□□□□□ -2.15
ZIC1Q15915 RNU6-545P-201ENST00000362681 104 ntBASIC1.61□□□□□ -2.15
ZIC1Q15915 Y_RNA.72-201ENST00000362894 103 ntBASIC1.61□□□□□ -2.15
ZIC1Q15915 RNU6-1059P-201ENST00000363752 98 ntBASIC1.61□□□□□ -2.15
ZIC1Q15915 SNORA8-201ENST00000384574 139 ntBASIC1.61□□□□□ -2.15
ZIC1Q15915 AC004866.1-201ENST00000411748 78 ntBASIC1.61□□□□□ -2.15
ZIC1Q15915 MTND3P8-201ENST00000412909 339 ntBASIC1.61□□□□□ -2.15
ZIC1Q15915 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC1.61□□□□□ -2.15
ZIC1Q15915 MTCO3P8-201ENST00000453691 755 ntBASIC1.61□□□□□ -2.15
ZIC1Q15915 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC1.61□□□□□ -2.15
ZIC1Q15915 MTND5P5-201ENST00000503764 376 ntBASIC1.61□□□□□ -2.15
ZIC1Q15915 MIR4273-201ENST00000582824 84 ntBASIC1.61□□□□□ -2.15
ZIC1Q15915 MIR5006-201ENST00000583027 110 ntBASIC1.61□□□□□ -2.15
ZIC1Q15915 RMST_6.1-201ENST00000611980 203 ntBASIC1.61□□□□□ -2.15
ZIC1Q15915 AL773524.1-201ENST00000614065 229 ntBASIC1.61□□□□□ -2.15
ZIC1Q15915 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC1.61□□□□□ -2.15
ZIC1Q15915 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.61□□□□□ -2.15
ZIC1Q15915 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC1.61□□□□□ -2.15
ZIC1Q15915 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC1.61□□□□□ -2.15
ZIC1Q15915 MTND4P5-201ENST00000435821 1374 ntBASIC1.6□□□□□ -2.15
ZIC1Q15915 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC1.6□□□□□ -2.15
ZIC1Q15915 RNU6-596P-201ENST00000365395 98 ntBASIC1.6□□□□□ -2.15
ZIC1Q15915 MIR32-201ENST00000384965 70 ntBASIC1.6□□□□□ -2.15
ZIC1Q15915 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC1.6□□□□□ -2.15
ZIC1Q15915 MIR320B2-201ENST00000408479 138 ntBASIC1.6□□□□□ -2.15
ZIC1Q15915 RNU6-174P-201ENST00000410406 106 ntBASIC1.6□□□□□ -2.15
ZIC1Q15915 USP9YP30-201ENST00000430729 455 ntBASIC1.6□□□□□ -2.15
ZIC1Q15915 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC1.6□□□□□ -2.15
ZIC1Q15915 MTCO1P44-201ENST00000441935 243 ntBASIC1.6□□□□□ -2.15
ZIC1Q15915 AC010531.2-201ENST00000465012 153 ntBASIC1.6□□□□□ -2.15
ZIC1Q15915 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC1.6□□□□□ -2.15
ZIC1Q15915 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC1.6□□□□□ -2.15
ZIC1Q15915 CBX3P4-201ENST00000538909 354 ntBASIC1.6□□□□□ -2.15
ZIC1Q15915 MIR4299-201ENST00000577899 72 ntBASIC1.6□□□□□ -2.15
ZIC1Q15915 MIR5696-201ENST00000578474 85 ntBASIC1.6□□□□□ -2.15
ZIC1Q15915 AC022513.1-201ENST00000624512 117 ntBASIC1.6□□□□□ -2.15
ZIC1Q15915 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC1.6□□□□□ -2.15
ZIC1Q15915 CASC19-280ENST00000642102 1351 ntBASIC1.59□□□□□ -2.15
ZIC1Q15915 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.59□□□□□ -2.15
ZIC1Q15915 BX322639.1-202ENST00000423987 2213 ntBASIC1.59□□□□□ -2.15
ZIC1Q15915 CBX3P1-201ENST00000325243 554 ntBASIC1.59□□□□□ -2.15
ZIC1Q15915 SNORD115-32-201ENST00000364079 82 ntBASIC1.59□□□□□ -2.15
ZIC1Q15915 RNU6-842P-201ENST00000384269 107 ntBASIC1.59□□□□□ -2.15
ZIC1Q15915 SNORA48.1-201ENST00000390879 135 ntBASIC1.59□□□□□ -2.15
ZIC1Q15915 MIR300-201ENST00000401138 83 ntBASIC1.59□□□□□ -2.15
ZIC1Q15915 AC244636.1-201ENST00000421152 228 ntBASIC1.59□□□□□ -2.15
ZIC1Q15915 MTND1P2-201ENST00000430604 821 ntBASIC1.59□□□□□ -2.15
ZIC1Q15915 AC009237.7-201ENST00000447357 229 ntBASIC1.59□□□□□ -2.15
ZIC1Q15915 AC007395.1-201ENST00000451333 677 ntBASIC1.59□□□□□ -2.15
ZIC1Q15915 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC1.59□□□□□ -2.15
ZIC1Q15915 snoU13.30-201ENST00000458951 104 ntBASIC1.59□□□□□ -2.15
ZIC1Q15915 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC1.59□□□□□ -2.15
ZIC1Q15915 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.59□□□□□ -2.15
ZIC1Q15915 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC1.59□□□□□ -2.15
ZIC1Q15915 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC1.59□□□□□ -2.15
ZIC1Q15915 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.59□□□□□ -2.15
ZIC1Q15915 7SK.7-201ENST00000603504 247 ntBASIC1.59□□□□□ -2.15
ZIC1Q15915 SNRPGP20-201ENST00000604477 205 ntBASIC1.59□□□□□ -2.15
ZIC1Q15915 MIR502-201ENST00000606349 86 ntBASIC1.59□□□□□ -2.15
ZIC1Q15915 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.59□□□□□ -2.15
ZIC1Q15915 U1.36-201ENST00000620684 176 ntBASIC1.59□□□□□ -2.15
ZIC1Q15915 ZNF204P-201ENST00000416749 2397 ntBASIC1.59□□□□□ -2.16
ZIC1Q15915 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC1.59□□□□□ -2.16
ZIC1Q15915 ZNF72P-201ENST00000425869 1908 ntBASIC1.58□□□□□ -2.16
ZIC1Q15915 RNU6-457P-201ENST00000363999 107 ntBASIC1.58□□□□□ -2.16
ZIC1Q15915 RNU6-767P-201ENST00000384132 107 ntBASIC1.58□□□□□ -2.16
ZIC1Q15915 Y_RNA.533-201ENST00000384596 114 ntBASIC1.58□□□□□ -2.16
ZIC1Q15915 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
ZIC1Q15915 MIR548K-201ENST00000408406 116 ntBASIC1.58□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 181.4 ms