Protein–RNA interactions for Protein: P31276

HOXC13, Homeobox protein Hox-C13, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC13P31276 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
HOXC13P31276 MIR3941-201ENST00000582572 103 ntBASIC2.39□□□□□ -2.03
HOXC13P31276 AC016727.2-201ENST00000603988 621 ntBASIC2.39□□□□□ -2.03
HOXC13P31276 RNU6-6P-201ENST00000606623 107 ntBASIC2.39□□□□□ -2.03
HOXC13P31276 AC103705.1-201ENST00000619013 241 ntBASIC2.39□□□□□ -2.03
HOXC13P31276 U4.7-201ENST00000638126 106 ntBASIC2.39□□□□□ -2.03
HOXC13P31276 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
HOXC13P31276 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC2.39□□□□□ -2.03
HOXC13P31276 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC2.38□□□□□ -2.03
HOXC13P31276 AL356292.1-201ENST00000283110 373 ntBASIC2.38□□□□□ -2.03
HOXC13P31276 RNU6-490P-201ENST00000362985 107 ntBASIC2.38□□□□□ -2.03
HOXC13P31276 Y_RNA.210-201ENST00000364161 110 ntBASIC2.38□□□□□ -2.03
HOXC13P31276 RNU6-593P-201ENST00000364716 112 ntBASIC2.38□□□□□ -2.03
HOXC13P31276 RNU6-1127P-201ENST00000384580 107 ntBASIC2.38□□□□□ -2.03
HOXC13P31276 Y_RNA.552-201ENST00000384665 112 ntBASIC2.38□□□□□ -2.03
HOXC13P31276 RNU6ATAC3P-201ENST00000387974 126 ntBASIC2.38□□□□□ -2.03
HOXC13P31276 RNA5SP213-201ENST00000391031 106 ntBASIC2.38□□□□□ -2.03
HOXC13P31276 RNU6-823P-201ENST00000391042 103 ntBASIC2.38□□□□□ -2.03
HOXC13P31276 RNU6-1245P-201ENST00000411130 106 ntBASIC2.38□□□□□ -2.03
HOXC13P31276 RPL23AP50-201ENST00000434149 455 ntBASIC2.38□□□□□ -2.03
HOXC13P31276 RPL30P12-201ENST00000474666 353 ntBASIC2.38□□□□□ -2.03
HOXC13P31276 RNU2-69P-201ENST00000516061 100 ntBASIC2.38□□□□□ -2.03
HOXC13P31276 Y_RNA.680-201ENST00000516441 93 ntBASIC2.38□□□□□ -2.03
HOXC13P31276 SCARNA16.2-201ENST00000516520 172 ntBASIC2.38□□□□□ -2.03
HOXC13P31276 RNA5SP384-201ENST00000516615 116 ntBASIC2.38□□□□□ -2.03
HOXC13P31276 RNU6-1332P-201ENST00000516666 104 ntBASIC2.38□□□□□ -2.03
HOXC13P31276 AC034114.1-201ENST00000520293 285 ntBASIC2.38□□□□□ -2.03
HOXC13P31276 AC007375.1-201ENST00000554513 578 ntBASIC2.38□□□□□ -2.03
HOXC13P31276 MIR5692C1-201ENST00000585309 91 ntBASIC2.38□□□□□ -2.03
HOXC13P31276 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC2.38□□□□□ -2.03
HOXC13P31276 AL670379.2-201ENST00000604983 252 ntBASIC2.38□□□□□ -2.03
HOXC13P31276 AC018462.2-201ENST00000605375 395 ntBASIC2.38□□□□□ -2.03
HOXC13P31276 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC2.38□□□□□ -2.03
HOXC13P31276 MPP6-209ENST00000625307 126 ntTSL 5 BASIC2.38□□□□□ -2.03
HOXC13P31276 U2.22-201ENST00000636441 106 ntBASIC2.38□□□□□ -2.03
HOXC13P31276 Clostridiales-1.2-201ENST00000636724 160 ntBASIC2.38□□□□□ -2.03
HOXC13P31276 Y_RNA.2-201ENST00000362330 96 ntBASIC2.37□□□□□ -2.03
HOXC13P31276 RNU6-874P-201ENST00000362390 105 ntBASIC2.37□□□□□ -2.03
HOXC13P31276 RNU6-212P-201ENST00000362642 104 ntBASIC2.37□□□□□ -2.03
HOXC13P31276 RNU6-1303P-201ENST00000364841 107 ntBASIC2.37□□□□□ -2.03
HOXC13P31276 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
HOXC13P31276 HMGN2P39-201ENST00000398005 273 ntBASIC2.37□□□□□ -2.03
HOXC13P31276 RNA5SP181-201ENST00000410246 98 ntBASIC2.37□□□□□ -2.03
HOXC13P31276 AL356379.1-201ENST00000414105 126 ntBASIC2.37□□□□□ -2.03
HOXC13P31276 CEP57L1P1-201ENST00000430943 1201 ntBASIC2.37□□□□□ -2.03
HOXC13P31276 RPS15AP28-201ENST00000435088 386 ntBASIC2.37□□□□□ -2.03
HOXC13P31276 TRBV25OR9-2-201ENST00000438417 374 ntBASIC2.37□□□□□ -2.03
HOXC13P31276 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC2.37□□□□□ -2.03
HOXC13P31276 AC245102.2-201ENST00000448956 180 ntBASIC2.37□□□□□ -2.03
HOXC13P31276 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC2.37□□□□□ -2.03
HOXC13P31276 AC079804.2-201ENST00000490376 200 ntBASIC2.37□□□□□ -2.03
HOXC13P31276 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC2.37□□□□□ -2.03
HOXC13P31276 AC114801.2-201ENST00000503825 781 ntBASIC2.37□□□□□ -2.03
HOXC13P31276 AC109479.2-201ENST00000517842 174 ntBASIC2.37□□□□□ -2.03
HOXC13P31276 AC131281.1-201ENST00000522984 164 ntBASIC2.37□□□□□ -2.03
HOXC13P31276 AL627230.6-201ENST00000611129 280 ntBASIC2.37□□□□□ -2.03
HOXC13P31276 MIR6766-201ENST00000622641 72 ntBASIC2.37□□□□□ -2.03
HOXC13P31276 AC080100.1-201ENST00000624239 5356 ntBASIC2.36□□□□□ -2.03
HOXC13P31276 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
HOXC13P31276 RNU6-1059P-201ENST00000363752 98 ntBASIC2.36□□□□□ -2.03
HOXC13P31276 RNU6-1210P-201ENST00000363775 107 ntBASIC2.36□□□□□ -2.03
HOXC13P31276 RNU6-266P-201ENST00000364225 107 ntBASIC2.36□□□□□ -2.03
HOXC13P31276 Y_RNA.222-201ENST00000364264 102 ntBASIC2.36□□□□□ -2.03
HOXC13P31276 Y_RNA.238-201ENST00000364441 102 ntBASIC2.36□□□□□ -2.03
HOXC13P31276 Y_RNA.288-201ENST00000364854 92 ntBASIC2.36□□□□□ -2.03
HOXC13P31276 Y_RNA.424-201ENST00000384063 103 ntBASIC2.36□□□□□ -2.03
HOXC13P31276 Y_RNA.477-201ENST00000384352 108 ntBASIC2.36□□□□□ -2.03
HOXC13P31276 SNORA16.2-201ENST00000390991 127 ntBASIC2.36□□□□□ -2.03
HOXC13P31276 AC243428.1-201ENST00000421099 264 ntBASIC2.36□□□□□ -2.03
HOXC13P31276 MRPS18CP6-201ENST00000423587 223 ntBASIC2.36□□□□□ -2.03
HOXC13P31276 USP9YP30-201ENST00000430729 455 ntBASIC2.36□□□□□ -2.03
HOXC13P31276 RPS15AP10-201ENST00000432472 382 ntBASIC2.36□□□□□ -2.03
HOXC13P31276 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC2.36□□□□□ -2.03
HOXC13P31276 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC2.36□□□□□ -2.03
HOXC13P31276 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC2.36□□□□□ -2.03
HOXC13P31276 RPL39P29-201ENST00000447779 157 ntBASIC2.36□□□□□ -2.03
HOXC13P31276 AL353752.1-201ENST00000454946 260 ntBASIC2.36□□□□□ -2.03
HOXC13P31276 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC2.36□□□□□ -2.03
HOXC13P31276 AL121594.1-201ENST00000475906 575 ntBASIC2.36□□□□□ -2.03
HOXC13P31276 AC022447.4-201ENST00000504053 364 ntBASIC2.36□□□□□ -2.03
HOXC13P31276 RNU6-408P-201ENST00000515910 100 ntBASIC2.36□□□□□ -2.03
HOXC13P31276 SNORA4.4-201ENST00000515921 135 ntBASIC2.36□□□□□ -2.03
HOXC13P31276 GNAI2P1-201ENST00000541815 315 ntBASIC2.36□□□□□ -2.03
HOXC13P31276 NDUFA5P6-201ENST00000542110 379 ntBASIC2.36□□□□□ -2.03
HOXC13P31276 HSBP1P1-201ENST00000555205 166 ntBASIC2.36□□□□□ -2.03
HOXC13P31276 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC2.36□□□□□ -2.03
HOXC13P31276 SNORD58B-201ENST00000607313 66 ntBASIC2.36□□□□□ -2.03
HOXC13P31276 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.36□□□□□ -2.03
HOXC13P31276 AC009318.2-201ENST00000610917 651 ntBASIC2.36□□□□□ -2.03
HOXC13P31276 U2.17-201ENST00000611454 95 ntBASIC2.36□□□□□ -2.03
HOXC13P31276 AC005296.1-201ENST00000616145 209 ntBASIC2.36□□□□□ -2.03
HOXC13P31276 MIR8062-201ENST00000621515 85 ntBASIC2.36□□□□□ -2.03
HOXC13P31276 AC090517.3-201ENST00000625170 141 ntBASIC2.36□□□□□ -2.03
HOXC13P31276 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.36□□□□□ -2.03
HOXC13P31276 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC2.36□□□□□ -2.03
HOXC13P31276 AC092881.1-201ENST00000638218 2733 ntBASIC2.35□□□□□ -2.03
HOXC13P31276 ZNF72P-201ENST00000425869 1908 ntBASIC2.35□□□□□ -2.03
HOXC13P31276 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
HOXC13P31276 SNORA16B-201ENST00000364674 135 ntBASIC2.35□□□□□ -2.03
HOXC13P31276 RNU1-115P-201ENST00000365329 160 ntBASIC2.35□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 233.4 ms