Protein–RNA interactions for Protein: O15379

HDAC3, Histone deacetylase 3, humanhuman

Predictions only

Length 428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3O15379 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC1.75□□□□□ -2.13
HDAC3O15379 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC1.75□□□□□ -2.13
HDAC3O15379 AC007742.2-201ENST00000618226 398 ntBASIC1.75□□□□□ -2.13
HDAC3O15379 AC090971.5-201ENST00000621102 293 ntBASIC1.75□□□□□ -2.13
HDAC3O15379 uc_338.22-201ENST00000622722 187 ntBASIC1.75□□□□□ -2.13
HDAC3O15379 SNORD98-201ENST00000636377 67 ntBASIC1.75□□□□□ -2.13
HDAC3O15379 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
HDAC3O15379 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC1.74□□□□□ -2.13
HDAC3O15379 RNU6-1210P-201ENST00000363775 107 ntBASIC1.74□□□□□ -2.13
HDAC3O15379 Y_RNA.197-201ENST00000364004 102 ntBASIC1.74□□□□□ -2.13
HDAC3O15379 Y_RNA.395-201ENST00000383945 109 ntBASIC1.74□□□□□ -2.13
HDAC3O15379 Y_RNA.463-201ENST00000384271 102 ntBASIC1.74□□□□□ -2.13
HDAC3O15379 RNU6-1011P-201ENST00000384668 107 ntBASIC1.74□□□□□ -2.13
HDAC3O15379 MIR487A-201ENST00000385009 80 ntBASIC1.74□□□□□ -2.13
HDAC3O15379 BTF3L4P2-201ENST00000392798 346 ntBASIC1.74□□□□□ -2.13
HDAC3O15379 HMGN2P39-201ENST00000398005 273 ntBASIC1.74□□□□□ -2.13
HDAC3O15379 AL590135.1-201ENST00000422215 156 ntBASIC1.74□□□□□ -2.13
HDAC3O15379 PMCHL1-202ENST00000423102 261 ntBASIC1.74□□□□□ -2.13
HDAC3O15379 AC096920.1-201ENST00000423991 241 ntBASIC1.74□□□□□ -2.13
HDAC3O15379 AC019205.3-201ENST00000424573 156 ntBASIC1.74□□□□□ -2.13
HDAC3O15379 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC1.74□□□□□ -2.13
HDAC3O15379 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC1.74□□□□□ -2.13
HDAC3O15379 Z82188.1-201ENST00000436709 154 ntBASIC1.74□□□□□ -2.13
HDAC3O15379 AC244670.1-201ENST00000436879 112 ntBASIC1.74□□□□□ -2.13
HDAC3O15379 AC016700.2-201ENST00000446011 156 ntBASIC1.74□□□□□ -2.13
HDAC3O15379 snoU13.6-201ENST00000458785 104 ntBASIC1.74□□□□□ -2.13
HDAC3O15379 AC015911.1-201ENST00000495111 156 ntBASIC1.74□□□□□ -2.13
HDAC3O15379 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC1.74□□□□□ -2.13
HDAC3O15379 RNU6-699P-201ENST00000517081 110 ntBASIC1.74□□□□□ -2.13
HDAC3O15379 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC1.74□□□□□ -2.13
HDAC3O15379 MIR4273-201ENST00000582824 84 ntBASIC1.74□□□□□ -2.13
HDAC3O15379 MIR3171-201ENST00000584270 74 ntBASIC1.74□□□□□ -2.13
HDAC3O15379 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC1.74□□□□□ -2.13
HDAC3O15379 AC007792.1-201ENST00000623023 402 ntBASIC1.74□□□□□ -2.13
HDAC3O15379 MTND5P10-201ENST00000603719 1809 ntBASIC1.74□□□□□ -2.13
HDAC3O15379 MTND5P9-201ENST00000503854 1755 ntBASIC1.74□□□□□ -2.13
HDAC3O15379 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC1.73□□□□□ -2.13
HDAC3O15379 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
HDAC3O15379 snoU2_19.1-201ENST00000362361 80 ntBASIC1.73□□□□□ -2.13
HDAC3O15379 RNU6-874P-201ENST00000362390 105 ntBASIC1.73□□□□□ -2.13
HDAC3O15379 RNA5SP276-201ENST00000362580 94 ntBASIC1.73□□□□□ -2.13
HDAC3O15379 RNU4-15P-201ENST00000362613 141 ntBASIC1.73□□□□□ -2.13
HDAC3O15379 RNU6-655P-201ENST00000362858 107 ntBASIC1.73□□□□□ -2.13
HDAC3O15379 RNY3P11-201ENST00000364153 102 ntBASIC1.73□□□□□ -2.13
HDAC3O15379 RNU6-99P-201ENST00000364721 107 ntBASIC1.73□□□□□ -2.13
HDAC3O15379 RNU6-1227P-201ENST00000383981 107 ntBASIC1.73□□□□□ -2.13
HDAC3O15379 SNORA29-201ENST00000384183 140 ntBASIC1.73□□□□□ -2.13
HDAC3O15379 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.73□□□□□ -2.13
HDAC3O15379 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC1.73□□□□□ -2.13
HDAC3O15379 AL358453.1-201ENST00000422522 250 ntBASIC1.73□□□□□ -2.13
HDAC3O15379 MTCO3P29-201ENST00000432119 779 ntBASIC1.73□□□□□ -2.13
HDAC3O15379 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
HDAC3O15379 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC1.73□□□□□ -2.13
HDAC3O15379 AL137792.2-201ENST00000443484 235 ntBASIC1.73□□□□□ -2.13
HDAC3O15379 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC1.73□□□□□ -2.13
HDAC3O15379 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC1.73□□□□□ -2.13
HDAC3O15379 HMGB1P35-201ENST00000503360 598 ntBASIC1.73□□□□□ -2.13
HDAC3O15379 AC021146.2-201ENST00000504736 556 ntBASIC1.73□□□□□ -2.13
HDAC3O15379 AC105758.1-201ENST00000506038 399 ntBASIC1.73□□□□□ -2.13
HDAC3O15379 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC1.73□□□□□ -2.13
HDAC3O15379 RNU6-1170P-201ENST00000515974 106 ntBASIC1.73□□□□□ -2.13
HDAC3O15379 AC109329.1-201ENST00000518744 317 ntBASIC1.73□□□□□ -2.13
HDAC3O15379 IGHVII-53-1-201ENST00000519538 255 ntBASIC1.73□□□□□ -2.13
HDAC3O15379 AP003072.1-201ENST00000531740 145 ntBASIC1.73□□□□□ -2.13
HDAC3O15379 RPL30P11-203ENST00000598995 310 ntBASIC1.73□□□□□ -2.13
HDAC3O15379 SNRPGP17-201ENST00000603780 214 ntBASIC1.73□□□□□ -2.13
HDAC3O15379 Z98751.3-201ENST00000604447 521 ntBASIC1.73□□□□□ -2.13
HDAC3O15379 AL034555.1-201ENST00000604816 211 ntBASIC1.73□□□□□ -2.13
HDAC3O15379 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC1.73□□□□□ -2.13
HDAC3O15379 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC1.73□□□□□ -2.13
HDAC3O15379 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC1.72□□□□□ -2.13
HDAC3O15379 RNU5B-2P-201ENST00000363036 113 ntBASIC1.72□□□□□ -2.13
HDAC3O15379 RNY1P16-201ENST00000363063 111 ntBASIC1.72□□□□□ -2.13
HDAC3O15379 RNU6-595P-201ENST00000363944 107 ntBASIC1.72□□□□□ -2.13
HDAC3O15379 RNU6-1286P-201ENST00000383871 107 ntBASIC1.72□□□□□ -2.13
HDAC3O15379 RNU6-968P-201ENST00000384076 107 ntBASIC1.72□□□□□ -2.13
HDAC3O15379 Y_RNA.445-201ENST00000384168 102 ntBASIC1.72□□□□□ -2.13
HDAC3O15379 RNU6-1274P-201ENST00000384557 107 ntBASIC1.72□□□□□ -2.13
HDAC3O15379 EIF4EP2-201ENST00000422816 654 ntBASIC1.72□□□□□ -2.13
HDAC3O15379 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC1.72□□□□□ -2.13
HDAC3O15379 RPL23AP50-201ENST00000434149 455 ntBASIC1.72□□□□□ -2.13
HDAC3O15379 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC1.72□□□□□ -2.13
HDAC3O15379 RPL22P13-201ENST00000493291 347 ntBASIC1.72□□□□□ -2.13
HDAC3O15379 AC114801.2-201ENST00000503825 781 ntBASIC1.72□□□□□ -2.13
HDAC3O15379 AC016632.1-201ENST00000503994 196 ntBASIC1.72□□□□□ -2.13
HDAC3O15379 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC1.72□□□□□ -2.13
HDAC3O15379 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC1.72□□□□□ -2.13
HDAC3O15379 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC1.72□□□□□ -2.13
HDAC3O15379 MIR5701-3-201ENST00000578890 82 ntBASIC1.72□□□□□ -2.13
HDAC3O15379 MIR5701-1-201ENST00000585138 82 ntBASIC1.72□□□□□ -2.13
HDAC3O15379 AC022432.1-201ENST00000595739 310 ntBASIC1.72□□□□□ -2.13
HDAC3O15379 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC1.72□□□□□ -2.13
HDAC3O15379 MIR5701-2-201ENST00000615634 82 ntBASIC1.72□□□□□ -2.13
HDAC3O15379 AC134503.1-201ENST00000633048 54 ntBASIC1.72□□□□□ -2.13
HDAC3O15379 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
HDAC3O15379 AC092881.1-201ENST00000638218 2733 ntBASIC1.72□□□□□ -2.13
HDAC3O15379 AP000560.1-201ENST00000624150 1937 ntBASIC1.72□□□□□ -2.13
HDAC3O15379 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC1.71□□□□□ -2.14
HDAC3O15379 ZNF299P-201ENST00000406845 1804 ntBASIC1.71□□□□□ -2.14
HDAC3O15379 AC092268.1-201ENST00000342691 405 ntBASIC1.71□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 167 ms