Protein–RNA interactions for Protein: A6NM62

LRRC53, Leucine-rich repeat-containing protein 53, humanhuman

Predictions only

Length 1,247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC53A6NM62 RNU6-1156P-201ENST00000410365 100 ntBASIC2.23□□□□□ -2.05
LRRC53A6NM62 RNU4-53P-201ENST00000410828 140 ntBASIC2.23□□□□□ -2.05
LRRC53A6NM62 AL139156.1-201ENST00000412785 841 ntBASIC2.23□□□□□ -2.05
LRRC53A6NM62 AC007098.1-201ENST00000420122 367 ntBASIC2.23□□□□□ -2.05
LRRC53A6NM62 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC2.23□□□□□ -2.05
LRRC53A6NM62 USP9YP16-201ENST00000430287 407 ntBASIC2.23□□□□□ -2.05
LRRC53A6NM62 AC009237.7-201ENST00000447357 229 ntBASIC2.23□□□□□ -2.05
LRRC53A6NM62 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC2.23□□□□□ -2.05
LRRC53A6NM62 USP9YP23-201ENST00000455085 407 ntBASIC2.23□□□□□ -2.05
LRRC53A6NM62 MIR2053-201ENST00000459295 91 ntBASIC2.23□□□□□ -2.05
LRRC53A6NM62 AC079804.2-201ENST00000490376 200 ntBASIC2.23□□□□□ -2.05
LRRC53A6NM62 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC2.23□□□□□ -2.05
LRRC53A6NM62 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC2.23□□□□□ -2.05
LRRC53A6NM62 SCARNA15.3-201ENST00000626315 122 ntBASIC2.23□□□□□ -2.05
LRRC53A6NM62 SCARNA4.1-201ENST00000628597 123 ntBASIC2.23□□□□□ -2.05
LRRC53A6NM62 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC2.23□□□□□ -2.05
LRRC53A6NM62 MTND5P10-201ENST00000603719 1809 ntBASIC2.22□□□□□ -2.05
LRRC53A6NM62 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.22□□□□□ -2.05
LRRC53A6NM62 Y_RNA.61-201ENST00000362835 102 ntBASIC2.22□□□□□ -2.05
LRRC53A6NM62 Y_RNA.332-201ENST00000365271 113 ntBASIC2.22□□□□□ -2.05
LRRC53A6NM62 Y_RNA.364-201ENST00000365532 101 ntBASIC2.22□□□□□ -2.05
LRRC53A6NM62 RNU6-1040P-201ENST00000383974 107 ntBASIC2.22□□□□□ -2.05
LRRC53A6NM62 RNU6-245P-201ENST00000384020 107 ntBASIC2.22□□□□□ -2.05
LRRC53A6NM62 Y_RNA.419-201ENST00000384041 102 ntBASIC2.22□□□□□ -2.05
LRRC53A6NM62 SNORD14D-201ENST00000384390 87 ntBASIC2.22□□□□□ -2.05
LRRC53A6NM62 RNU6-1026P-201ENST00000384465 108 ntBASIC2.22□□□□□ -2.05
LRRC53A6NM62 Y_RNA.577-201ENST00000384794 101 ntBASIC2.22□□□□□ -2.05
LRRC53A6NM62 HMGN2P39-201ENST00000398005 273 ntBASIC2.22□□□□□ -2.05
LRRC53A6NM62 MIR320B2-201ENST00000408479 138 ntBASIC2.22□□□□□ -2.05
LRRC53A6NM62 SNORA11.4-201ENST00000408823 129 ntBASIC2.22□□□□□ -2.05
LRRC53A6NM62 MRPS18CP6-201ENST00000423587 223 ntBASIC2.22□□□□□ -2.05
LRRC53A6NM62 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC2.22□□□□□ -2.05
LRRC53A6NM62 U8.22-201ENST00000459141 133 ntBASIC2.22□□□□□ -2.05
LRRC53A6NM62 APOA2-205ENST00000468465 421 ntTSL 2 BASIC2.22□□□□□ -2.05
LRRC53A6NM62 AC105758.1-201ENST00000506038 399 ntBASIC2.22□□□□□ -2.05
LRRC53A6NM62 RNU4ATAC17P-201ENST00000517272 120 ntBASIC2.22□□□□□ -2.05
LRRC53A6NM62 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC2.22□□□□□ -2.05
LRRC53A6NM62 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC2.22□□□□□ -2.05
LRRC53A6NM62 MIR5695-201ENST00000579717 85 ntBASIC2.22□□□□□ -2.05
LRRC53A6NM62 AL359314.1-201ENST00000616913 261 ntBASIC2.22□□□□□ -2.05
LRRC53A6NM62 AC012640.5-201ENST00000623897 319 ntBASIC2.22□□□□□ -2.05
LRRC53A6NM62 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC2.22□□□□□ -2.05
LRRC53A6NM62 Y_RNA.146-201ENST00000363549 102 ntBASIC2.21□□□□□ -2.06
LRRC53A6NM62 Y_RNA.358-201ENST00000365491 99 ntBASIC2.21□□□□□ -2.06
LRRC53A6NM62 SNORA6-201ENST00000384033 151 ntBASIC2.21□□□□□ -2.06
LRRC53A6NM62 RNU6-301P-201ENST00000384277 107 ntBASIC2.21□□□□□ -2.06
LRRC53A6NM62 Y_RNA.557-201ENST00000384680 107 ntBASIC2.21□□□□□ -2.06
LRRC53A6NM62 Y_RNA.579-201ENST00000390939 94 ntBASIC2.21□□□□□ -2.06
LRRC53A6NM62 RNA5SP213-201ENST00000391031 106 ntBASIC2.21□□□□□ -2.06
LRRC53A6NM62 RNU1-139P-201ENST00000391307 165 ntBASIC2.21□□□□□ -2.06
LRRC53A6NM62 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.21□□□□□ -2.06
LRRC53A6NM62 AC016925.1-201ENST00000458303 298 ntBASIC2.21□□□□□ -2.06
LRRC53A6NM62 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC2.21□□□□□ -2.06
LRRC53A6NM62 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC2.21□□□□□ -2.06
LRRC53A6NM62 RNU6-1114P-201ENST00000516022 107 ntBASIC2.21□□□□□ -2.06
LRRC53A6NM62 RNU6-699P-201ENST00000517081 110 ntBASIC2.21□□□□□ -2.06
LRRC53A6NM62 SNORA31.25-201ENST00000517242 134 ntBASIC2.21□□□□□ -2.06
LRRC53A6NM62 RRN3P3-201ENST00000549207 578 ntBASIC2.21□□□□□ -2.06
LRRC53A6NM62 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC2.21□□□□□ -2.06
LRRC53A6NM62 AL133255.1-201ENST00000606374 441 ntBASIC2.21□□□□□ -2.06
LRRC53A6NM62 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC2.21□□□□□ -2.06
LRRC53A6NM62 MTND4P1-201ENST00000457501 1466 ntBASIC2.2□□□□□ -2.06
LRRC53A6NM62 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
LRRC53A6NM62 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC2.2□□□□□ -2.06
LRRC53A6NM62 MIR340-201ENST00000362125 95 ntBASIC2.2□□□□□ -2.06
LRRC53A6NM62 RNU6-490P-201ENST00000362985 107 ntBASIC2.2□□□□□ -2.06
LRRC53A6NM62 Y_RNA.99-201ENST00000363138 105 ntBASIC2.2□□□□□ -2.06
LRRC53A6NM62 RNU6-280P-201ENST00000364145 104 ntBASIC2.2□□□□□ -2.06
LRRC53A6NM62 RNU6-1164P-201ENST00000364428 107 ntBASIC2.2□□□□□ -2.06
LRRC53A6NM62 Y_RNA.315-201ENST00000365117 102 ntBASIC2.2□□□□□ -2.06
LRRC53A6NM62 RNU6-281P-201ENST00000384212 103 ntBASIC2.2□□□□□ -2.06
LRRC53A6NM62 AL023284.1-201ENST00000403956 276 ntBASIC2.2□□□□□ -2.06
LRRC53A6NM62 SNORD23.1-201ENST00000408212 104 ntBASIC2.2□□□□□ -2.06
LRRC53A6NM62 AC123900.1-201ENST00000420390 96 ntBASIC2.2□□□□□ -2.06
LRRC53A6NM62 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC2.2□□□□□ -2.06
LRRC53A6NM62 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC2.2□□□□□ -2.06
LRRC53A6NM62 AC090617.3-201ENST00000573670 475 ntBASIC2.2□□□□□ -2.06
LRRC53A6NM62 SNORD53-201ENST00000579969 78 ntBASIC2.2□□□□□ -2.06
LRRC53A6NM62 MIR4672-201ENST00000583126 81 ntBASIC2.2□□□□□ -2.06
LRRC53A6NM62 AC080078.3-201ENST00000605407 463 ntBASIC2.2□□□□□ -2.06
LRRC53A6NM62 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2.2□□□□□ -2.06
LRRC53A6NM62 AC005296.1-201ENST00000616145 209 ntBASIC2.2□□□□□ -2.06
LRRC53A6NM62 AC087588.2-201ENST00000617667 426 ntBASIC2.2□□□□□ -2.06
LRRC53A6NM62 MIR6873-201ENST00000622788 63 ntBASIC2.2□□□□□ -2.06
LRRC53A6NM62 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.19□□□□□ -2.06
LRRC53A6NM62 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC2.19□□□□□ -2.06
LRRC53A6NM62 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
LRRC53A6NM62 RNU6-727P-201ENST00000363592 107 ntBASIC2.19□□□□□ -2.06
LRRC53A6NM62 SNORD114-6-201ENST00000364393 72 ntBASIC2.19□□□□□ -2.06
LRRC53A6NM62 Y_RNA.463-201ENST00000384271 102 ntBASIC2.19□□□□□ -2.06
LRRC53A6NM62 SNORA67.2-201ENST00000384300 149 ntBASIC2.19□□□□□ -2.06
LRRC53A6NM62 MIR518A2-201ENST00000384966 87 ntBASIC2.19□□□□□ -2.06
LRRC53A6NM62 MIR1283-1-201ENST00000408494 87 ntBASIC2.19□□□□□ -2.06
LRRC53A6NM62 RN7SKP284-201ENST00000411002 343 ntBASIC2.19□□□□□ -2.06
LRRC53A6NM62 EIF1P2-201ENST00000428233 350 ntBASIC2.19□□□□□ -2.06
LRRC53A6NM62 IPO7P1-201ENST00000442031 636 ntBASIC2.19□□□□□ -2.06
LRRC53A6NM62 AC096638.1-201ENST00000444678 216 ntBASIC2.19□□□□□ -2.06
LRRC53A6NM62 AC027575.1-201ENST00000481064 460 ntBASIC2.19□□□□□ -2.06
LRRC53A6NM62 RNU6-344P-201ENST00000516635 111 ntBASIC2.19□□□□□ -2.06
LRRC53A6NM62 RNU1-117P-201ENST00000517041 158 ntBASIC2.19□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 170.8 ms