Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 snoU18.1-201ENST00000629629 71 ntBASIC3.96□□□□□ -1.78
TMEM88BA6NKF7 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC3.96□□□□□ -1.78
TMEM88BA6NKF7 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC3.96□□□□□ -1.78
TMEM88BA6NKF7 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
TMEM88BA6NKF7 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC3.96□□□□□ -1.78
TMEM88BA6NKF7 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC3.95□□□□□ -1.78
TMEM88BA6NKF7 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC3.95□□□□□ -1.78
TMEM88BA6NKF7 SNORD31B-201ENST00000364977 69 ntBASIC3.95□□□□□ -1.78
TMEM88BA6NKF7 RNU2-63P-201ENST00000410792 194 ntBASIC3.95□□□□□ -1.78
TMEM88BA6NKF7 RNA5SP104-201ENST00000410989 118 ntBASIC3.95□□□□□ -1.78
TMEM88BA6NKF7 SUMO1P3-201ENST00000439961 304 ntBASIC3.95□□□□□ -1.78
TMEM88BA6NKF7 AC146507.2-201ENST00000460608 476 ntBASIC3.95□□□□□ -1.78
TMEM88BA6NKF7 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC3.95□□□□□ -1.78
TMEM88BA6NKF7 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC3.95□□□□□ -1.78
TMEM88BA6NKF7 AC012603.1-201ENST00000606424 528 ntBASIC3.95□□□□□ -1.78
TMEM88BA6NKF7 AL078604.3-201ENST00000615580 211 ntBASIC3.95□□□□□ -1.78
TMEM88BA6NKF7 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
TMEM88BA6NKF7 U6.115-201ENST00000636045 103 ntBASIC3.95□□□□□ -1.78
TMEM88BA6NKF7 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC3.94□□□□□ -1.78
TMEM88BA6NKF7 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
TMEM88BA6NKF7 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC3.94□□□□□ -1.78
TMEM88BA6NKF7 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
TMEM88BA6NKF7 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC3.94□□□□□ -1.78
TMEM88BA6NKF7 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC3.94□□□□□ -1.78
TMEM88BA6NKF7 SNORD114-7-201ENST00000362520 77 ntBASIC3.94□□□□□ -1.78
TMEM88BA6NKF7 RNU6-545P-201ENST00000362681 104 ntBASIC3.94□□□□□ -1.78
TMEM88BA6NKF7 RNU6-944P-201ENST00000364023 107 ntBASIC3.94□□□□□ -1.78
TMEM88BA6NKF7 AP002088.1-201ENST00000382740 395 ntBASIC3.94□□□□□ -1.78
TMEM88BA6NKF7 Y_RNA.464-201ENST00000384282 110 ntBASIC3.94□□□□□ -1.78
TMEM88BA6NKF7 AL357139.1-201ENST00000407792 426 ntBASIC3.94□□□□□ -1.78
TMEM88BA6NKF7 RNA5SP306-201ENST00000411087 107 ntBASIC3.94□□□□□ -1.78
TMEM88BA6NKF7 TRBV25OR9-2-201ENST00000438417 374 ntBASIC3.94□□□□□ -1.78
TMEM88BA6NKF7 AL161788.1-201ENST00000441805 169 ntBASIC3.94□□□□□ -1.78
TMEM88BA6NKF7 RNU7-57P-201ENST00000459540 60 ntBASIC3.94□□□□□ -1.78
TMEM88BA6NKF7 RN7SL594P-201ENST00000470590 287 ntBASIC3.94□□□□□ -1.78
TMEM88BA6NKF7 AC023141.11-201ENST00000508864 202 ntBASIC3.94□□□□□ -1.78
TMEM88BA6NKF7 AC091826.1-201ENST00000514065 313 ntBASIC3.94□□□□□ -1.78
TMEM88BA6NKF7 MIR449C-201ENST00000516047 92 ntBASIC3.94□□□□□ -1.78
TMEM88BA6NKF7 MIR3616-201ENST00000584070 92 ntBASIC3.94□□□□□ -1.78
TMEM88BA6NKF7 AC010620.2-201ENST00000600135 313 ntBASIC3.94□□□□□ -1.78
TMEM88BA6NKF7 AL365434.2-201ENST00000607979 234 ntBASIC3.94□□□□□ -1.78
TMEM88BA6NKF7 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC3.94□□□□□ -1.78
TMEM88BA6NKF7 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
TMEM88BA6NKF7 AC000403.1-201ENST00000613696 3585 ntBASIC3.93□□□□□ -1.78
TMEM88BA6NKF7 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
TMEM88BA6NKF7 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
TMEM88BA6NKF7 RNU6-271P-201ENST00000363858 105 ntBASIC3.93□□□□□ -1.78
TMEM88BA6NKF7 Y_RNA.308-201ENST00000365043 101 ntBASIC3.93□□□□□ -1.78
TMEM88BA6NKF7 RNU6-546P-201ENST00000383991 107 ntBASIC3.93□□□□□ -1.78
TMEM88BA6NKF7 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC3.93□□□□□ -1.78
TMEM88BA6NKF7 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC3.93□□□□□ -1.78
TMEM88BA6NKF7 UBL5P3-201ENST00000475112 231 ntBASIC3.93□□□□□ -1.78
TMEM88BA6NKF7 AC107393.1-201ENST00000512403 346 ntBASIC3.93□□□□□ -1.78
TMEM88BA6NKF7 AC008885.1-201ENST00000514930 301 ntBASIC3.93□□□□□ -1.78
TMEM88BA6NKF7 Y_RNA.662-201ENST00000516028 97 ntBASIC3.93□□□□□ -1.78
TMEM88BA6NKF7 RNU6-948P-201ENST00000516374 107 ntBASIC3.93□□□□□ -1.78
TMEM88BA6NKF7 AC136628.3-201ENST00000521868 290 ntBASIC3.93□□□□□ -1.78
TMEM88BA6NKF7 MIR5692C2-201ENST00000577959 77 ntBASIC3.93□□□□□ -1.78
TMEM88BA6NKF7 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC3.93□□□□□ -1.78
TMEM88BA6NKF7 AC011921.3-201ENST00000605540 361 ntBASIC3.93□□□□□ -1.78
TMEM88BA6NKF7 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC3.93□□□□□ -1.78
TMEM88BA6NKF7 snoZ196.1-201ENST00000625269 89 ntBASIC3.93□□□□□ -1.78
TMEM88BA6NKF7 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC3.93□□□□□ -1.78
TMEM88BA6NKF7 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.92□□□□□ -1.78
TMEM88BA6NKF7 AC080128.1-201ENST00000474389 1917 ntBASIC3.92□□□□□ -1.78
TMEM88BA6NKF7 Y_RNA.287-201ENST00000364853 94 ntBASIC3.92□□□□□ -1.78
TMEM88BA6NKF7 SNORD21-201ENST00000383953 95 ntBASIC3.92□□□□□ -1.78
TMEM88BA6NKF7 U3.39-201ENST00000408569 239 ntBASIC3.92□□□□□ -1.78
TMEM88BA6NKF7 COX6CP10-201ENST00000416832 224 ntBASIC3.92□□□□□ -1.78
TMEM88BA6NKF7 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC3.92□□□□□ -1.78
TMEM88BA6NKF7 AC006539.3-201ENST00000454258 129 ntBASIC3.92□□□□□ -1.78
TMEM88BA6NKF7 TRBV12-1-201ENST00000479785 344 ntBASIC3.92□□□□□ -1.78
TMEM88BA6NKF7 AC087441.2-201ENST00000529141 262 ntBASIC3.92□□□□□ -1.78
TMEM88BA6NKF7 AL365265.1-201ENST00000621045 234 ntBASIC3.92□□□□□ -1.78
TMEM88BA6NKF7 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.92□□□□□ -1.78
TMEM88BA6NKF7 ANKRD20A9P-201ENST00000457997 2978 ntBASIC3.91□□□□□ -1.78
TMEM88BA6NKF7 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC3.91□□□□□ -1.78
TMEM88BA6NKF7 RNU1-72P-201ENST00000362976 153 ntBASIC3.91□□□□□ -1.78
TMEM88BA6NKF7 Y_RNA.456-201ENST00000384232 111 ntBASIC3.91□□□□□ -1.78
TMEM88BA6NKF7 RNU6-855P-201ENST00000410395 104 ntBASIC3.91□□□□□ -1.78
TMEM88BA6NKF7 RNU6-1328P-201ENST00000410938 106 ntBASIC3.91□□□□□ -1.78
TMEM88BA6NKF7 AC004552.1-201ENST00000419089 348 ntBASIC3.91□□□□□ -1.78
TMEM88BA6NKF7 AC010154.1-201ENST00000425857 269 ntBASIC3.91□□□□□ -1.78
TMEM88BA6NKF7 AL353705.1-201ENST00000433468 480 ntBASIC3.91□□□□□ -1.78
TMEM88BA6NKF7 AC009969.1-201ENST00000438726 172 ntBASIC3.91□□□□□ -1.78
TMEM88BA6NKF7 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC3.91□□□□□ -1.78
TMEM88BA6NKF7 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
TMEM88BA6NKF7 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC3.91□□□□□ -1.78
TMEM88BA6NKF7 AC091544.4-201ENST00000555268 342 ntBASIC3.91□□□□□ -1.78
TMEM88BA6NKF7 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC3.91□□□□□ -1.78
TMEM88BA6NKF7 MIR4769-201ENST00000584126 77 ntBASIC3.91□□□□□ -1.78
TMEM88BA6NKF7 ELOCP29-201ENST00000588193 334 ntBASIC3.91□□□□□ -1.78
TMEM88BA6NKF7 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC3.91□□□□□ -1.78
TMEM88BA6NKF7 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC3.91□□□□□ -1.78
TMEM88BA6NKF7 MIR7843-201ENST00000622274 79 ntBASIC3.91□□□□□ -1.78
TMEM88BA6NKF7 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
TMEM88BA6NKF7 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC3.91□□□□□ -1.78
TMEM88BA6NKF7 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC3.91□□□□□ -1.78
TMEM88BA6NKF7 MAPK10-362ENST00000641864 4484 ntBASIC3.91□□□□□ -1.78
TMEM88BA6NKF7 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.91□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 212.8 ms