Protein–RNA interactions for Protein: Q9Y4P1

ATG4B, Cysteine protease ATG4B, humanhuman

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4BQ9Y4P1 AC009248.2-201ENST00000619826 254 ntBASIC1.74□□□□□ -2.13
ATG4BQ9Y4P1 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
ATG4BQ9Y4P1 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
ATG4BQ9Y4P1 ANKRD20A9P-201ENST00000457997 2978 ntBASIC1.74□□□□□ -2.13
ATG4BQ9Y4P1 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC1.73□□□□□ -2.13
ATG4BQ9Y4P1 SNORD50.1-201ENST00000362987 71 ntBASIC1.73□□□□□ -2.13
ATG4BQ9Y4P1 RNU6-23P-201ENST00000363283 107 ntBASIC1.73□□□□□ -2.13
ATG4BQ9Y4P1 RNA5SP493-201ENST00000364115 91 ntBASIC1.73□□□□□ -2.13
ATG4BQ9Y4P1 Y_RNA.505-201ENST00000384489 102 ntBASIC1.73□□□□□ -2.13
ATG4BQ9Y4P1 SNORA26.9-201ENST00000391322 122 ntBASIC1.73□□□□□ -2.13
ATG4BQ9Y4P1 Y_RNA.599-201ENST00000410489 109 ntBASIC1.73□□□□□ -2.13
ATG4BQ9Y4P1 DAP3P1-201ENST00000441522 278 ntBASIC1.73□□□□□ -2.13
ATG4BQ9Y4P1 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC1.73□□□□□ -2.13
ATG4BQ9Y4P1 PPP1R2P5-201ENST00000457256 603 ntBASIC1.73□□□□□ -2.13
ATG4BQ9Y4P1 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC1.73□□□□□ -2.13
ATG4BQ9Y4P1 RPS29P11-201ENST00000496507 171 ntBASIC1.73□□□□□ -2.13
ATG4BQ9Y4P1 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC1.73□□□□□ -2.13
ATG4BQ9Y4P1 RNU6-566P-201ENST00000516790 107 ntBASIC1.73□□□□□ -2.13
ATG4BQ9Y4P1 AF235103.2-201ENST00000525753 346 ntBASIC1.73□□□□□ -2.13
ATG4BQ9Y4P1 SNORA59B-202ENST00000578183 701 ntBASIC1.73□□□□□ -2.13
ATG4BQ9Y4P1 MIR4524B-201ENST00000581569 115 ntBASIC1.73□□□□□ -2.13
ATG4BQ9Y4P1 AC011494.1-201ENST00000596454 237 ntBASIC1.73□□□□□ -2.13
ATG4BQ9Y4P1 B3GNTL1P2-201ENST00000603673 288 ntBASIC1.73□□□□□ -2.13
ATG4BQ9Y4P1 AC092794.1-201ENST00000612734 582 ntBASIC1.73□□□□□ -2.13
ATG4BQ9Y4P1 AL590240.4-201ENST00000616908 390 ntBASIC1.73□□□□□ -2.13
ATG4BQ9Y4P1 MESTIT1_1.1-201ENST00000618871 140 ntBASIC1.73□□□□□ -2.13
ATG4BQ9Y4P1 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC1.73□□□□□ -2.13
ATG4BQ9Y4P1 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.72□□□□□ -2.13
ATG4BQ9Y4P1 SNORD31B-201ENST00000364977 69 ntBASIC1.72□□□□□ -2.13
ATG4BQ9Y4P1 MIR487A-201ENST00000385009 80 ntBASIC1.72□□□□□ -2.13
ATG4BQ9Y4P1 SNORA12.2-201ENST00000391040 156 ntBASIC1.72□□□□□ -2.13
ATG4BQ9Y4P1 SNORA40.18-201ENST00000391200 128 ntBASIC1.72□□□□□ -2.13
ATG4BQ9Y4P1 RNA5SP501-201ENST00000410990 112 ntBASIC1.72□□□□□ -2.13
ATG4BQ9Y4P1 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC1.72□□□□□ -2.13
ATG4BQ9Y4P1 RPL30P16-201ENST00000419341 429 ntBASIC1.72□□□□□ -2.13
ATG4BQ9Y4P1 AC007677.1-201ENST00000445757 515 ntBASIC1.72□□□□□ -2.13
ATG4BQ9Y4P1 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC1.72□□□□□ -2.13
ATG4BQ9Y4P1 AC112492.4-201ENST00000456549 352 ntBASIC1.72□□□□□ -2.13
ATG4BQ9Y4P1 FO393415.2-201ENST00000480085 343 ntBASIC1.72□□□□□ -2.13
ATG4BQ9Y4P1 RPL23AP75-201ENST00000491601 451 ntBASIC1.72□□□□□ -2.13
ATG4BQ9Y4P1 HMGB3P17-201ENST00000504195 649 ntBASIC1.72□□□□□ -2.13
ATG4BQ9Y4P1 AC107393.1-201ENST00000512403 346 ntBASIC1.72□□□□□ -2.13
ATG4BQ9Y4P1 Y_RNA.682-201ENST00000516457 100 ntBASIC1.72□□□□□ -2.13
ATG4BQ9Y4P1 RNA5SP454-201ENST00000517231 127 ntBASIC1.72□□□□□ -2.13
ATG4BQ9Y4P1 MIR4790-201ENST00000577799 79 ntBASIC1.72□□□□□ -2.13
ATG4BQ9Y4P1 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC1.72□□□□□ -2.13
ATG4BQ9Y4P1 AC010900.2-201ENST00000604508 210 ntBASIC1.72□□□□□ -2.13
ATG4BQ9Y4P1 MIR6128-201ENST00000615528 109 ntBASIC1.72□□□□□ -2.13
ATG4BQ9Y4P1 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC1.72□□□□□ -2.13
ATG4BQ9Y4P1 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC1.72□□□□□ -2.13
ATG4BQ9Y4P1 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC1.72□□□□□ -2.13
ATG4BQ9Y4P1 SNORD114-6-201ENST00000364393 72 ntBASIC1.71□□□□□ -2.14
ATG4BQ9Y4P1 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC1.71□□□□□ -2.14
ATG4BQ9Y4P1 MIR9-3-201ENST00000385084 90 ntBASIC1.71□□□□□ -2.14
ATG4BQ9Y4P1 AL356776.1-201ENST00000406574 447 ntBASIC1.71□□□□□ -2.14
ATG4BQ9Y4P1 AL139396.1-201ENST00000421137 167 ntBASIC1.71□□□□□ -2.14
ATG4BQ9Y4P1 AC139712.2-201ENST00000424302 339 ntBASIC1.71□□□□□ -2.14
ATG4BQ9Y4P1 MTATP6P13-201ENST00000438531 667 ntBASIC1.71□□□□□ -2.14
ATG4BQ9Y4P1 OR2AQ1P-201ENST00000451972 200 ntBASIC1.71□□□□□ -2.14
ATG4BQ9Y4P1 AC079354.2-201ENST00000453523 154 ntBASIC1.71□□□□□ -2.14
ATG4BQ9Y4P1 AC016925.1-201ENST00000458303 298 ntBASIC1.71□□□□□ -2.14
ATG4BQ9Y4P1 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC1.71□□□□□ -2.14
ATG4BQ9Y4P1 AC108210.2-201ENST00000503681 201 ntBASIC1.71□□□□□ -2.14
ATG4BQ9Y4P1 AC018710.1-201ENST00000506509 158 ntBASIC1.71□□□□□ -2.14
ATG4BQ9Y4P1 RNU1-54P-201ENST00000517181 120 ntBASIC1.71□□□□□ -2.14
ATG4BQ9Y4P1 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC1.71□□□□□ -2.14
ATG4BQ9Y4P1 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC1.71□□□□□ -2.14
ATG4BQ9Y4P1 DEFB131C-201ENST00000528817 165 ntBASIC1.71□□□□□ -2.14
ATG4BQ9Y4P1 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.71□□□□□ -2.14
ATG4BQ9Y4P1 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC1.71□□□□□ -2.14
ATG4BQ9Y4P1 AC015712.3-201ENST00000559380 164 ntBASIC1.71□□□□□ -2.14
ATG4BQ9Y4P1 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC1.71□□□□□ -2.14
ATG4BQ9Y4P1 MIR5006-201ENST00000583027 110 ntBASIC1.71□□□□□ -2.14
ATG4BQ9Y4P1 AC060780.3-201ENST00000589464 80 ntBASIC1.71□□□□□ -2.14
ATG4BQ9Y4P1 DLEU2_5.1-201ENST00000615567 84 ntBASIC1.71□□□□□ -2.14
ATG4BQ9Y4P1 AC005562.2-201ENST00000618264 111 ntBASIC1.71□□□□□ -2.14
ATG4BQ9Y4P1 AL359697.1-201ENST00000624879 587 ntBASIC1.71□□□□□ -2.14
ATG4BQ9Y4P1 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC1.71□□□□□ -2.14
ATG4BQ9Y4P1 WWP1P1-201ENST00000466609 2769 ntBASIC1.71□□□□□ -2.14
ATG4BQ9Y4P1 RNU6-545P-201ENST00000362681 104 ntBASIC1.7□□□□□ -2.14
ATG4BQ9Y4P1 Y_RNA.301-201ENST00000364990 103 ntBASIC1.7□□□□□ -2.14
ATG4BQ9Y4P1 MIR676-201ENST00000390702 67 ntBASIC1.7□□□□□ -2.14
ATG4BQ9Y4P1 RNU6-510P-201ENST00000391239 108 ntBASIC1.7□□□□□ -2.14
ATG4BQ9Y4P1 AL358453.1-201ENST00000422522 250 ntBASIC1.7□□□□□ -2.14
ATG4BQ9Y4P1 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC1.7□□□□□ -2.14
ATG4BQ9Y4P1 HMGN2P19-201ENST00000425149 265 ntBASIC1.7□□□□□ -2.14
ATG4BQ9Y4P1 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC1.7□□□□□ -2.14
ATG4BQ9Y4P1 Z82188.1-201ENST00000436709 154 ntBASIC1.7□□□□□ -2.14
ATG4BQ9Y4P1 AC004386.2-201ENST00000441858 148 ntBASIC1.7□□□□□ -2.14
ATG4BQ9Y4P1 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC1.7□□□□□ -2.14
ATG4BQ9Y4P1 RNA5SP57-201ENST00000459463 123 ntBASIC1.7□□□□□ -2.14
ATG4BQ9Y4P1 RNU6-358P-201ENST00000516564 75 ntBASIC1.7□□□□□ -2.14
ATG4BQ9Y4P1 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC1.7□□□□□ -2.14
ATG4BQ9Y4P1 AC026470.2-201ENST00000561492 181 ntBASIC1.7□□□□□ -2.14
ATG4BQ9Y4P1 MIR4419B-201ENST00000577260 68 ntBASIC1.7□□□□□ -2.14
ATG4BQ9Y4P1 MIR4273-201ENST00000582824 84 ntBASIC1.7□□□□□ -2.14
ATG4BQ9Y4P1 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC1.7□□□□□ -2.14
ATG4BQ9Y4P1 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC1.7□□□□□ -2.14
ATG4BQ9Y4P1 TEX41-243ENST00000614173 190 ntTSL 5 BASIC1.7□□□□□ -2.14
ATG4BQ9Y4P1 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.7□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 250.4 ms