Protein–RNA interactions for Protein: Q9BYB0

SHANK3, SH3 and multiple ankyrin repeat domains protein 3, humanhuman

Predictions only

Length 1,731 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3Q9BYB0 MTCO2P4-201ENST00000517968 247 ntBASIC0.91□□□□□ -2.26
SHANK3Q9BYB0 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC0.91□□□□□ -2.26
SHANK3Q9BYB0 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC0.91□□□□□ -2.26
SHANK3Q9BYB0 U2.17-201ENST00000611454 95 ntBASIC0.91□□□□□ -2.26
SHANK3Q9BYB0 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.91□□□□□ -2.26
SHANK3Q9BYB0 AL159152.1-201ENST00000635019 2587 ntBASIC0.9□□□□□ -2.26
SHANK3Q9BYB0 RNU6-562P-201ENST00000362731 107 ntBASIC0.9□□□□□ -2.27
SHANK3Q9BYB0 Y_RNA.67-201ENST00000362870 100 ntBASIC0.9□□□□□ -2.27
SHANK3Q9BYB0 RNU6-1120P-201ENST00000362988 108 ntBASIC0.9□□□□□ -2.27
SHANK3Q9BYB0 RNY3P10-201ENST00000384764 102 ntBASIC0.9□□□□□ -2.27
SHANK3Q9BYB0 BX295541.1-201ENST00000417774 250 ntBASIC0.9□□□□□ -2.27
SHANK3Q9BYB0 AL365203.2-201ENST00000423444 196 ntBASIC0.9□□□□□ -2.27
SHANK3Q9BYB0 C8orf59P1-201ENST00000429930 303 ntBASIC0.9□□□□□ -2.27
SHANK3Q9BYB0 AC069257.2-201ENST00000441819 155 ntBASIC0.9□□□□□ -2.27
SHANK3Q9BYB0 OFD1P4Y-201ENST00000455273 1179 ntBASIC0.9□□□□□ -2.27
SHANK3Q9BYB0 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC0.9□□□□□ -2.27
SHANK3Q9BYB0 RNU6-415P-201ENST00000516252 97 ntBASIC0.9□□□□□ -2.27
SHANK3Q9BYB0 RNU6-1146P-201ENST00000516282 102 ntBASIC0.9□□□□□ -2.27
SHANK3Q9BYB0 RNU6-759P-201ENST00000516740 103 ntBASIC0.9□□□□□ -2.27
SHANK3Q9BYB0 SNORA18.6-201ENST00000516792 115 ntBASIC0.9□□□□□ -2.27
SHANK3Q9BYB0 SUMO2P18-201ENST00000518873 252 ntBASIC0.9□□□□□ -2.27
SHANK3Q9BYB0 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC0.9□□□□□ -2.27
SHANK3Q9BYB0 MTND1P24-201ENST00000552175 861 ntBASIC0.9□□□□□ -2.27
SHANK3Q9BYB0 MIR5094-201ENST00000578766 85 ntBASIC0.9□□□□□ -2.27
SHANK3Q9BYB0 MIR5589-201ENST00000579442 60 ntBASIC0.9□□□□□ -2.27
SHANK3Q9BYB0 AC023932.2-201ENST00000603176 175 ntBASIC0.9□□□□□ -2.27
SHANK3Q9BYB0 AP001485.1-201ENST00000604799 199 ntBASIC0.9□□□□□ -2.27
SHANK3Q9BYB0 AL360219.1-201ENST00000610230 366 ntBASIC0.9□□□□□ -2.27
SHANK3Q9BYB0 AC104073.3-201ENST00000610942 955 ntBASIC0.9□□□□□ -2.27
SHANK3Q9BYB0 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC0.9□□□□□ -2.27
SHANK3Q9BYB0 RNU6-862P-201ENST00000362804 105 ntBASIC0.89□□□□□ -2.27
SHANK3Q9BYB0 RNU6-82P-201ENST00000363970 107 ntBASIC0.89□□□□□ -2.27
SHANK3Q9BYB0 RNU6-553P-201ENST00000364047 96 ntBASIC0.89□□□□□ -2.27
SHANK3Q9BYB0 RNU6-336P-201ENST00000364891 107 ntBASIC0.89□□□□□ -2.27
SHANK3Q9BYB0 RNU6-715P-201ENST00000365204 103 ntBASIC0.89□□□□□ -2.27
SHANK3Q9BYB0 RNU6-338P-201ENST00000383888 105 ntBASIC0.89□□□□□ -2.27
SHANK3Q9BYB0 MTCO2P3-201ENST00000442543 421 ntBASIC0.89□□□□□ -2.27
SHANK3Q9BYB0 ZNF736P12Y-201ENST00000443152 1243 ntBASIC0.89□□□□□ -2.27
SHANK3Q9BYB0 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC0.89□□□□□ -2.27
SHANK3Q9BYB0 AL162395.1-201ENST00000457882 422 ntBASIC0.89□□□□□ -2.27
SHANK3Q9BYB0 RNU6-1037P-201ENST00000459571 107 ntBASIC0.89□□□□□ -2.27
SHANK3Q9BYB0 MTCO3P38-201ENST00000468910 766 ntBASIC0.89□□□□□ -2.27
SHANK3Q9BYB0 SNRPGP7-201ENST00000469016 106 ntBASIC0.89□□□□□ -2.27
SHANK3Q9BYB0 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC0.89□□□□□ -2.27
SHANK3Q9BYB0 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC0.89□□□□□ -2.27
SHANK3Q9BYB0 RNU6-351P-201ENST00000516097 100 ntBASIC0.89□□□□□ -2.27
SHANK3Q9BYB0 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC0.89□□□□□ -2.27
SHANK3Q9BYB0 MTCO3P23-201ENST00000561363 289 ntBASIC0.89□□□□□ -2.27
SHANK3Q9BYB0 AC009994.1-201ENST00000606889 253 ntBASIC0.89□□□□□ -2.27
SHANK3Q9BYB0 AL078604.3-201ENST00000615580 211 ntBASIC0.89□□□□□ -2.27
SHANK3Q9BYB0 AL590240.4-201ENST00000616908 390 ntBASIC0.89□□□□□ -2.27
SHANK3Q9BYB0 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC0.89□□□□□ -2.27
SHANK3Q9BYB0 MIR424-201ENST00000362227 98 ntBASIC0.89□□□□□ -2.27
SHANK3Q9BYB0 RNU6-1103P-201ENST00000384150 107 ntBASIC0.89□□□□□ -2.27
SHANK3Q9BYB0 MIR520A-201ENST00000384862 85 ntBASIC0.89□□□□□ -2.27
SHANK3Q9BYB0 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC0.89□□□□□ -2.27
SHANK3Q9BYB0 RPL21P111-201ENST00000418453 477 ntBASIC0.89□□□□□ -2.27
SHANK3Q9BYB0 ARL5AP1-201ENST00000418991 388 ntBASIC0.89□□□□□ -2.27
SHANK3Q9BYB0 AL590135.1-201ENST00000422215 156 ntBASIC0.89□□□□□ -2.27
SHANK3Q9BYB0 AC019205.3-201ENST00000424573 156 ntBASIC0.89□□□□□ -2.27
SHANK3Q9BYB0 AC073641.1-201ENST00000425192 429 ntTSL 3 BASIC0.89□□□□□ -2.27
SHANK3Q9BYB0 AC016700.2-201ENST00000446011 156 ntBASIC0.89□□□□□ -2.27
SHANK3Q9BYB0 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC0.89□□□□□ -2.27
SHANK3Q9BYB0 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC0.89□□□□□ -2.27
SHANK3Q9BYB0 AC016925.1-201ENST00000458303 298 ntBASIC0.89□□□□□ -2.27
SHANK3Q9BYB0 RPS29P15-201ENST00000458329 171 ntBASIC0.89□□□□□ -2.27
SHANK3Q9BYB0 RNU7-14P-201ENST00000459331 62 ntBASIC0.89□□□□□ -2.27
SHANK3Q9BYB0 RPL26P26-201ENST00000480251 434 ntBASIC0.89□□□□□ -2.27
SHANK3Q9BYB0 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC0.89□□□□□ -2.27
SHANK3Q9BYB0 AC015911.1-201ENST00000495111 156 ntBASIC0.89□□□□□ -2.27
SHANK3Q9BYB0 TRAPPC2P7-201ENST00000509650 231 ntBASIC0.89□□□□□ -2.27
SHANK3Q9BYB0 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC0.89□□□□□ -2.27
SHANK3Q9BYB0 RNU6-902P-201ENST00000517212 91 ntBASIC0.89□□□□□ -2.27
SHANK3Q9BYB0 AP002963.1-201ENST00000530590 184 ntBASIC0.89□□□□□ -2.27
SHANK3Q9BYB0 RAB11AP2-201ENST00000545905 639 ntBASIC0.89□□□□□ -2.27
SHANK3Q9BYB0 MIR548AB-201ENST00000584917 84 ntBASIC0.89□□□□□ -2.27
SHANK3Q9BYB0 AC104458.1-201ENST00000608243 463 ntBASIC0.89□□□□□ -2.27
SHANK3Q9BYB0 AL121890.5-201ENST00000620848 304 ntBASIC0.89□□□□□ -2.27
SHANK3Q9BYB0 AL359697.1-201ENST00000624879 587 ntBASIC0.89□□□□□ -2.27
SHANK3Q9BYB0 SNORA25.8-201ENST00000364831 128 ntBASIC0.88□□□□□ -2.27
SHANK3Q9BYB0 AC133104.1-201ENST00000429100 218 ntBASIC0.88□□□□□ -2.27
SHANK3Q9BYB0 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC0.88□□□□□ -2.27
SHANK3Q9BYB0 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC0.88□□□□□ -2.27
SHANK3Q9BYB0 RNU7-138P-201ENST00000459479 64 ntBASIC0.88□□□□□ -2.27
SHANK3Q9BYB0 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC0.88□□□□□ -2.27
SHANK3Q9BYB0 AC097473.1-201ENST00000508142 408 ntBASIC0.88□□□□□ -2.27
SHANK3Q9BYB0 RNU2-69P-201ENST00000516061 100 ntBASIC0.88□□□□□ -2.27
SHANK3Q9BYB0 RNU6-1098P-201ENST00000516772 96 ntBASIC0.88□□□□□ -2.27
SHANK3Q9BYB0 AP003484.1-201ENST00000530974 250 ntBASIC0.88□□□□□ -2.27
SHANK3Q9BYB0 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC0.88□□□□□ -2.27
SHANK3Q9BYB0 AC087683.1-201ENST00000591187 441 ntBASIC0.88□□□□□ -2.27
SHANK3Q9BYB0 AC013244.2-201ENST00000603396 103 ntBASIC0.88□□□□□ -2.27
SHANK3Q9BYB0 AL603755.1-201ENST00000619504 163 ntBASIC0.88□□□□□ -2.27
SHANK3Q9BYB0 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC0.88□□□□□ -2.27
SHANK3Q9BYB0 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC0.87□□□□□ -2.27
SHANK3Q9BYB0 RNU6ATAC2P-201ENST00000387943 126 ntBASIC0.87□□□□□ -2.27
SHANK3Q9BYB0 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC0.87□□□□□ -2.27
SHANK3Q9BYB0 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC0.87□□□□□ -2.27
SHANK3Q9BYB0 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC0.87□□□□□ -2.27
SHANK3Q9BYB0 AC092628.1-201ENST00000436250 252 ntBASIC0.87□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 185.2 ms