Protein–RNA interactions for Protein: P67936

TPM4, Tropomyosin alpha-4 chain, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4P67936 AC097065.2-201ENST00000608159 533 ntBASIC0.35□□□□□ -2.35
TPM4P67936 TCL6_2.1-201ENST00000615162 119 ntBASIC0.35□□□□□ -2.35
TPM4P67936 AL607023.1-201ENST00000620045 248 ntBASIC0.35□□□□□ -2.35
TPM4P67936 AL031667.3-201ENST00000620124 655 ntBASIC0.35□□□□□ -2.35
TPM4P67936 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC0.35□□□□□ -2.35
TPM4P67936 MTND5P17-201ENST00000418405 1603 ntBASIC0.35□□□□□ -2.35
TPM4P67936 RNU6-636P-201ENST00000384598 107 ntBASIC0.34□□□□□ -2.36
TPM4P67936 AC016909.1-201ENST00000415916 166 ntBASIC0.34□□□□□ -2.36
TPM4P67936 MTND3P17-201ENST00000416968 344 ntBASIC0.34□□□□□ -2.36
TPM4P67936 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC0.34□□□□□ -2.36
TPM4P67936 AC004386.2-201ENST00000441858 148 ntBASIC0.34□□□□□ -2.36
TPM4P67936 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC0.34□□□□□ -2.36
TPM4P67936 AC074290.1-201ENST00000448883 135 ntBASIC0.34□□□□□ -2.36
TPM4P67936 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC0.34□□□□□ -2.36
TPM4P67936 AC022364.2-201ENST00000457963 554 ntBASIC0.34□□□□□ -2.36
TPM4P67936 AC002350.1-201ENST00000490759 375 ntBASIC0.34□□□□□ -2.36
TPM4P67936 RNU6-1053P-201ENST00000515930 101 ntBASIC0.34□□□□□ -2.36
TPM4P67936 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC0.34□□□□□ -2.36
TPM4P67936 AC004584.2-201ENST00000570407 410 ntBASIC0.34□□□□□ -2.36
TPM4P67936 MIR5006-201ENST00000583027 110 ntBASIC0.34□□□□□ -2.36
TPM4P67936 AL162424.1-201ENST00000602325 221 ntBASIC0.34□□□□□ -2.36
TPM4P67936 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC0.34□□□□□ -2.36
TPM4P67936 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC0.34□□□□□ -2.36
TPM4P67936 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC0.34□□□□□ -2.36
TPM4P67936 Y_RNA.338-201ENST00000365320 114 ntBASIC0.33□□□□□ -2.36
TPM4P67936 RNU6-57P-201ENST00000411348 103 ntBASIC0.33□□□□□ -2.36
TPM4P67936 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC0.33□□□□□ -2.36
TPM4P67936 AC098934.3-201ENST00000430450 190 ntBASIC0.33□□□□□ -2.36
TPM4P67936 AC005002.2-201ENST00000438228 269 ntBASIC0.33□□□□□ -2.36
TPM4P67936 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC0.33□□□□□ -2.36
TPM4P67936 MTCO2P6-201ENST00000463134 685 ntBASIC0.33□□□□□ -2.36
TPM4P67936 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC0.33□□□□□ -2.36
TPM4P67936 AC025465.4-201ENST00000513422 638 ntBASIC0.33□□□□□ -2.36
TPM4P67936 SCARNA24.1-201ENST00000516465 137 ntBASIC0.33□□□□□ -2.36
TPM4P67936 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC0.33□□□□□ -2.36
TPM4P67936 MTATP6P3-201ENST00000581686 676 ntBASIC0.33□□□□□ -2.36
TPM4P67936 AC136443.5-201ENST00000603741 370 ntBASIC0.33□□□□□ -2.36
TPM4P67936 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC0.33□□□□□ -2.36
TPM4P67936 SNORA2.2-201ENST00000365473 135 ntBASIC0.32□□□□□ -2.36
TPM4P67936 RNU6-163P-201ENST00000384396 106 ntBASIC0.32□□□□□ -2.36
TPM4P67936 MIR586-201ENST00000385035 97 ntBASIC0.32□□□□□ -2.36
TPM4P67936 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC0.32□□□□□ -2.36
TPM4P67936 MTCO2P23-201ENST00000425216 680 ntBASIC0.32□□□□□ -2.36
TPM4P67936 AC245047.8-201ENST00000456455 284 ntBASIC0.32□□□□□ -2.36
TPM4P67936 U7.7-201ENST00000459276 60 ntBASIC0.32□□□□□ -2.36
TPM4P67936 RN7SKP12-201ENST00000516275 143 ntBASIC0.32□□□□□ -2.36
TPM4P67936 RNU6-1220P-201ENST00000517126 108 ntBASIC0.32□□□□□ -2.36
TPM4P67936 AP002001.1-203ENST00000534002 267 ntBASIC0.32□□□□□ -2.36
TPM4P67936 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC0.32□□□□□ -2.36
TPM4P67936 AC011155.2-201ENST00000623202 216 ntBASIC0.32□□□□□ -2.36
TPM4P67936 AL078595.3-201ENST00000623815 1166 ntBASIC0.32□□□□□ -2.36
TPM4P67936 MIR6516-201ENST00000630554 81 ntBASIC0.32□□□□□ -2.36
TPM4P67936 AL442644.1-201ENST00000454390 3105 ntBASIC0.32□□□□□ -2.36
TPM4P67936 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC0.31□□□□□ -2.36
TPM4P67936 RNU6-1287P-201ENST00000362914 107 ntBASIC0.31□□□□□ -2.36
TPM4P67936 RNY1P12-201ENST00000364251 105 ntBASIC0.31□□□□□ -2.36
TPM4P67936 Y_RNA.480-201ENST00000384364 102 ntBASIC0.31□□□□□ -2.36
TPM4P67936 RNU6-1060P-201ENST00000384664 107 ntBASIC0.31□□□□□ -2.36
TPM4P67936 CDK8P2-201ENST00000415020 547 ntBASIC0.31□□□□□ -2.36
TPM4P67936 MTCO2P12-201ENST00000427426 682 ntBASIC0.31□□□□□ -2.36
TPM4P67936 AC009237.7-201ENST00000447357 229 ntBASIC0.31□□□□□ -2.36
TPM4P67936 AL031313.1-201ENST00000448435 256 ntBASIC0.31□□□□□ -2.36
TPM4P67936 FABP5P5-201ENST00000515537 406 ntBASIC0.31□□□□□ -2.36
TPM4P67936 AC138749.5-201ENST00000611461 208 ntBASIC0.31□□□□□ -2.36
TPM4P67936 AC093913.1-201ENST00000614178 329 ntBASIC0.31□□□□□ -2.36
TPM4P67936 AC009159.2-201ENST00000617603 606 ntBASIC0.31□□□□□ -2.36
TPM4P67936 AC022418.1-201ENST00000624118 445 ntBASIC0.31□□□□□ -2.36
TPM4P67936 U6.114-201ENST00000636407 96 ntBASIC0.31□□□□□ -2.36
TPM4P67936 ISCA1P6-201ENST00000427740 390 ntBASIC0.3□□□□□ -2.36
TPM4P67936 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC0.3□□□□□ -2.36
TPM4P67936 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC0.3□□□□□ -2.36
TPM4P67936 snoU13.6-201ENST00000458785 104 ntBASIC0.3□□□□□ -2.36
TPM4P67936 RNU7-57P-201ENST00000459540 60 ntBASIC0.3□□□□□ -2.36
TPM4P67936 RNA5SP134-201ENST00000516492 96 ntBASIC0.3□□□□□ -2.36
TPM4P67936 AC016256.1-201ENST00000547971 354 ntBASIC0.3□□□□□ -2.36
TPM4P67936 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC0.3□□□□□ -2.36
TPM4P67936 AL512605.2-201ENST00000592972 256 ntBASIC0.3□□□□□ -2.36
TPM4P67936 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.3□□□□□ -2.36
TPM4P67936 AP000568.1-201ENST00000282964 442 ntBASIC0.29□□□□□ -2.36
TPM4P67936 RNU1-119P-201ENST00000391122 165 ntBASIC0.29□□□□□ -2.36
TPM4P67936 AC008134.1-201ENST00000420943 193 ntBASIC0.29□□□□□ -2.36
TPM4P67936 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC0.29□□□□□ -2.36
TPM4P67936 SNORA25.17-201ENST00000517184 124 ntBASIC0.29□□□□□ -2.36
TPM4P67936 RNU7-128P-201ENST00000517247 62 ntBASIC0.29□□□□□ -2.36
TPM4P67936 AC025647.1-201ENST00000517879 253 ntBASIC0.29□□□□□ -2.36
TPM4P67936 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC0.29□□□□□ -2.36
TPM4P67936 AC106038.2-201ENST00000520706 568 ntBASIC0.29□□□□□ -2.36
TPM4P67936 AC027419.1-201ENST00000522976 328 ntBASIC0.29□□□□□ -2.36
TPM4P67936 SUB1P2-201ENST00000556401 297 ntBASIC0.29□□□□□ -2.36
TPM4P67936 MTND1P15-201ENST00000579262 949 ntBASIC0.29□□□□□ -2.36
TPM4P67936 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC0.29□□□□□ -2.36
TPM4P67936 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC0.29□□□□□ -2.36
TPM4P67936 AL391903.3-201ENST00000612158 163 ntBASIC0.29□□□□□ -2.36
TPM4P67936 AC243829.6-201ENST00000612652 106 ntBASIC0.29□□□□□ -2.36
TPM4P67936 AC004808.1-201ENST00000627671 721 ntBASIC0.29□□□□□ -2.36
TPM4P67936 RNU6-1305P-201ENST00000364353 104 ntBASIC0.28□□□□□ -2.36
TPM4P67936 SNORA20.2-201ENST00000383922 131 ntBASIC0.28□□□□□ -2.36
TPM4P67936 SNORD89-201ENST00000390981 114 ntBASIC0.28□□□□□ -2.36
TPM4P67936 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC0.28□□□□□ -2.36
TPM4P67936 AC004866.1-201ENST00000411748 78 ntBASIC0.28□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 239.6 ms