Protein–RNA interactions for Protein: O60500

NPHS1, Nephrin, humanhuman

Predictions only

Length 1,241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHS1O60500 SNORD17-201ENST00000390930 237 ntBASIC3.24□□□□□ -1.89
NPHS1O60500 RNA5SP354-201ENST00000391247 136 ntBASIC3.24□□□□□ -1.89
NPHS1O60500 AL357139.1-201ENST00000407792 426 ntBASIC3.24□□□□□ -1.89
NPHS1O60500 RPL32P35-201ENST00000415214 394 ntBASIC3.24□□□□□ -1.89
NPHS1O60500 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC3.24□□□□□ -1.89
NPHS1O60500 AL135790.2-201ENST00000437701 267 ntBASIC3.24□□□□□ -1.89
NPHS1O60500 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC3.24□□□□□ -1.89
NPHS1O60500 RBMY2UP-201ENST00000453474 324 ntBASIC3.24□□□□□ -1.89
NPHS1O60500 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC3.24□□□□□ -1.89
NPHS1O60500 TRAPPC2P7-201ENST00000509650 231 ntBASIC3.24□□□□□ -1.89
NPHS1O60500 AC245166.1-201ENST00000521012 253 ntBASIC3.24□□□□□ -1.89
NPHS1O60500 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC3.24□□□□□ -1.89
NPHS1O60500 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC3.24□□□□□ -1.89
NPHS1O60500 MIR5692C2-201ENST00000577959 77 ntBASIC3.24□□□□□ -1.89
NPHS1O60500 RPL30P11-203ENST00000598995 310 ntBASIC3.24□□□□□ -1.89
NPHS1O60500 AL133393.1-201ENST00000603277 287 ntBASIC3.24□□□□□ -1.89
NPHS1O60500 AC104465.1-201ENST00000611365 139 ntBASIC3.24□□□□□ -1.89
NPHS1O60500 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.24□□□□□ -1.89
NPHS1O60500 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC3.24□□□□□ -1.89
NPHS1O60500 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.24□□□□□ -1.89
NPHS1O60500 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
NPHS1O60500 AC110774.1-201ENST00000623567 2018 ntBASIC3.24□□□□□ -1.89
NPHS1O60500 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
NPHS1O60500 Y_RNA.8-201ENST00000362353 102 ntBASIC3.23□□□□□ -1.89
NPHS1O60500 RNU6-763P-201ENST00000390865 106 ntBASIC3.23□□□□□ -1.89
NPHS1O60500 AL031003.1-201ENST00000404229 172 ntBASIC3.23□□□□□ -1.89
NPHS1O60500 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.23□□□□□ -1.89
NPHS1O60500 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC3.23□□□□□ -1.89
NPHS1O60500 U8.19-201ENST00000459095 133 ntBASIC3.23□□□□□ -1.89
NPHS1O60500 KRTAP13-6P-201ENST00000508999 371 ntBASIC3.23□□□□□ -1.89
NPHS1O60500 MTND5P41-201ENST00000517498 206 ntBASIC3.23□□□□□ -1.89
NPHS1O60500 IGKV2-26-201ENST00000518305 343 ntBASIC3.23□□□□□ -1.89
NPHS1O60500 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC3.23□□□□□ -1.89
NPHS1O60500 MIR4765-201ENST00000585007 77 ntBASIC3.23□□□□□ -1.89
NPHS1O60500 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC3.23□□□□□ -1.89
NPHS1O60500 AC107294.3-201ENST00000609211 526 ntBASIC3.23□□□□□ -1.89
NPHS1O60500 CR392039.5-201ENST00000623201 510 ntBASIC3.23□□□□□ -1.89
NPHS1O60500 IL33-202ENST00000417746 2327 ntTSL 2 BASIC3.22□□□□□ -1.89
NPHS1O60500 AC103988.1-201ENST00000566382 2177 ntBASIC3.22□□□□□ -1.89
NPHS1O60500 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
NPHS1O60500 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
NPHS1O60500 RNU1-70P-201ENST00000362618 164 ntBASIC3.22□□□□□ -1.89
NPHS1O60500 RNA5SP119-201ENST00000362715 117 ntBASIC3.22□□□□□ -1.89
NPHS1O60500 RNU6-801P-201ENST00000364087 105 ntBASIC3.22□□□□□ -1.89
NPHS1O60500 SNORD32B-201ENST00000364460 84 ntBASIC3.22□□□□□ -1.89
NPHS1O60500 RNA5SP479-201ENST00000364858 117 ntBASIC3.22□□□□□ -1.89
NPHS1O60500 RNU6-1027P-201ENST00000383998 107 ntBASIC3.22□□□□□ -1.89
NPHS1O60500 MIR548B-201ENST00000385247 97 ntBASIC3.22□□□□□ -1.89
NPHS1O60500 SNORA48.8-201ENST00000391324 134 ntBASIC3.22□□□□□ -1.89
NPHS1O60500 RNA5SP229-201ENST00000410809 99 ntBASIC3.22□□□□□ -1.89
NPHS1O60500 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.22□□□□□ -1.89
NPHS1O60500 AL451074.5-201ENST00000415894 435 ntBASIC3.22□□□□□ -1.89
NPHS1O60500 TOMM22P2-201ENST00000430735 237 ntBASIC3.22□□□□□ -1.89
NPHS1O60500 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC3.22□□□□□ -1.89
NPHS1O60500 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
NPHS1O60500 AC140059.1-201ENST00000489238 361 ntBASIC3.22□□□□□ -1.89
NPHS1O60500 SCARNA17.1-201ENST00000516211 143 ntBASIC3.22□□□□□ -1.89
NPHS1O60500 RNU6-346P-201ENST00000516288 111 ntBASIC3.22□□□□□ -1.89
NPHS1O60500 SCARNA17.2-201ENST00000516334 143 ntBASIC3.22□□□□□ -1.89
NPHS1O60500 AC009127.3-201ENST00000570531 403 ntBASIC3.22□□□□□ -1.89
NPHS1O60500 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC3.22□□□□□ -1.89
NPHS1O60500 AL670379.2-201ENST00000604983 252 ntBASIC3.22□□□□□ -1.89
NPHS1O60500 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC3.22□□□□□ -1.89
NPHS1O60500 SCARNA17.4-201ENST00000614296 143 ntBASIC3.22□□□□□ -1.89
NPHS1O60500 SNORA50A-202ENST00000629536 136 ntBASIC3.22□□□□□ -1.89
NPHS1O60500 AL034408.1-202ENST00000636088 415 ntBASIC3.22□□□□□ -1.89
NPHS1O60500 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.22□□□□□ -1.89
NPHS1O60500 AL161912.2-201ENST00000565707 3007 ntBASIC3.22□□□□□ -1.89
NPHS1O60500 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC3.21□□□□□ -1.9
NPHS1O60500 U3.8-201ENST00000363675 217 ntBASIC3.21□□□□□ -1.9
NPHS1O60500 Y_RNA.243-201ENST00000364481 109 ntBASIC3.21□□□□□ -1.9
NPHS1O60500 RNU6-394P-201ENST00000410735 107 ntBASIC3.21□□□□□ -1.9
NPHS1O60500 GOT2P5-201ENST00000433995 546 ntBASIC3.21□□□□□ -1.9
NPHS1O60500 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC3.21□□□□□ -1.9
NPHS1O60500 MRPS36P2-201ENST00000512569 299 ntBASIC3.21□□□□□ -1.9
NPHS1O60500 PHBP14-201ENST00000512887 367 ntBASIC3.21□□□□□ -1.9
NPHS1O60500 RNU6-1098P-201ENST00000516772 96 ntBASIC3.21□□□□□ -1.9
NPHS1O60500 SUMO2P18-201ENST00000518873 252 ntBASIC3.21□□□□□ -1.9
NPHS1O60500 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC3.21□□□□□ -1.9
NPHS1O60500 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.21□□□□□ -1.9
NPHS1O60500 MIR3144-201ENST00000579460 79 ntBASIC3.21□□□□□ -1.9
NPHS1O60500 AC103810.1-201ENST00000579873 453 ntBASIC3.21□□□□□ -1.9
NPHS1O60500 AC008739.2-201ENST00000597006 317 ntBASIC3.21□□□□□ -1.9
NPHS1O60500 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC3.21□□□□□ -1.9
NPHS1O60500 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC3.21□□□□□ -1.9
NPHS1O60500 AC084757.4-201ENST00000616350 526 ntBASIC3.21□□□□□ -1.9
NPHS1O60500 AC002064.3-201ENST00000623448 346 ntBASIC3.21□□□□□ -1.9
NPHS1O60500 AC008873.1-201ENST00000625051 138 ntBASIC3.21□□□□□ -1.9
NPHS1O60500 AC090517.3-201ENST00000625170 141 ntBASIC3.21□□□□□ -1.9
NPHS1O60500 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
NPHS1O60500 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
NPHS1O60500 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.2□□□□□ -1.9
NPHS1O60500 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
NPHS1O60500 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC3.2□□□□□ -1.9
NPHS1O60500 RNU4-35P-201ENST00000362588 141 ntBASIC3.2□□□□□ -1.9
NPHS1O60500 RNU6-1305P-201ENST00000364353 104 ntBASIC3.2□□□□□ -1.9
NPHS1O60500 Y_RNA.398-201ENST00000383952 99 ntBASIC3.2□□□□□ -1.9
NPHS1O60500 Y_RNA.571-201ENST00000384753 98 ntBASIC3.2□□□□□ -1.9
NPHS1O60500 SNORA26.5-201ENST00000391215 123 ntBASIC3.2□□□□□ -1.9
NPHS1O60500 AL357075.1-201ENST00000404107 726 ntBASIC3.2□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 202.2 ms