Protein–RNA interactions for Protein: Q9Y4P1

ATG4B, Cysteine protease ATG4B, humanhuman

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4BQ9Y4P1 POLR3GP2-201ENST00000588366 668 ntBASIC1.78□□□□□ -2.12
ATG4BQ9Y4P1 AC008749.1-201ENST00000597650 306 ntBASIC1.78□□□□□ -2.12
ATG4BQ9Y4P1 AC009994.1-201ENST00000606889 253 ntBASIC1.78□□□□□ -2.12
ATG4BQ9Y4P1 AC019193.3-201ENST00000609144 554 ntBASIC1.78□□□□□ -2.12
ATG4BQ9Y4P1 AC002553.4-201ENST00000616896 331 ntBASIC1.78□□□□□ -2.12
ATG4BQ9Y4P1 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC1.78□□□□□ -2.12
ATG4BQ9Y4P1 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
ATG4BQ9Y4P1 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.78□□□□□ -2.13
ATG4BQ9Y4P1 Y_RNA.86-201ENST00000363020 111 ntBASIC1.77□□□□□ -2.13
ATG4BQ9Y4P1 RNU6-438P-201ENST00000365561 103 ntBASIC1.77□□□□□ -2.13
ATG4BQ9Y4P1 RNU6-306P-201ENST00000384617 107 ntBASIC1.77□□□□□ -2.13
ATG4BQ9Y4P1 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
ATG4BQ9Y4P1 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC1.77□□□□□ -2.13
ATG4BQ9Y4P1 FTH1P25-201ENST00000447665 469 ntBASIC1.77□□□□□ -2.13
ATG4BQ9Y4P1 RPL23AP42-201ENST00000471152 471 ntBASIC1.77□□□□□ -2.13
ATG4BQ9Y4P1 AC069439.1-201ENST00000494739 167 ntBASIC1.77□□□□□ -2.13
ATG4BQ9Y4P1 AC116337.1-201ENST00000509680 687 ntBASIC1.77□□□□□ -2.13
ATG4BQ9Y4P1 ATP5EP1-201ENST00000510257 156 ntBASIC1.77□□□□□ -2.13
ATG4BQ9Y4P1 RNU6-864P-201ENST00000516256 108 ntBASIC1.77□□□□□ -2.13
ATG4BQ9Y4P1 RNU6-1098P-201ENST00000516772 96 ntBASIC1.77□□□□□ -2.13
ATG4BQ9Y4P1 RNU2-44P-201ENST00000516795 194 ntBASIC1.77□□□□□ -2.13
ATG4BQ9Y4P1 AC022254.1-201ENST00000567857 235 ntBASIC1.77□□□□□ -2.13
ATG4BQ9Y4P1 AC084782.3-201ENST00000612282 578 ntBASIC1.77□□□□□ -2.13
ATG4BQ9Y4P1 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC1.77□□□□□ -2.13
ATG4BQ9Y4P1 AC006504.8-201ENST00000621046 635 ntBASIC1.77□□□□□ -2.13
ATG4BQ9Y4P1 CBX3P1-201ENST00000325243 554 ntBASIC1.76□□□□□ -2.13
ATG4BQ9Y4P1 RNU5B-2P-201ENST00000363036 113 ntBASIC1.76□□□□□ -2.13
ATG4BQ9Y4P1 Y_RNA.135-201ENST00000363439 95 ntBASIC1.76□□□□□ -2.13
ATG4BQ9Y4P1 RNU6-1013P-201ENST00000384180 107 ntBASIC1.76□□□□□ -2.13
ATG4BQ9Y4P1 MIR583-201ENST00000384846 75 ntBASIC1.76□□□□□ -2.13
ATG4BQ9Y4P1 MIR597-201ENST00000384968 97 ntBASIC1.76□□□□□ -2.13
ATG4BQ9Y4P1 MIR549A-201ENST00000385268 96 ntBASIC1.76□□□□□ -2.13
ATG4BQ9Y4P1 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC1.76□□□□□ -2.13
ATG4BQ9Y4P1 AC123900.1-201ENST00000420390 96 ntBASIC1.76□□□□□ -2.13
ATG4BQ9Y4P1 AC003989.2-201ENST00000440224 169 ntBASIC1.76□□□□□ -2.13
ATG4BQ9Y4P1 SNRPEP8-201ENST00000442866 260 ntBASIC1.76□□□□□ -2.13
ATG4BQ9Y4P1 RNU7-14P-201ENST00000459331 62 ntBASIC1.76□□□□□ -2.13
ATG4BQ9Y4P1 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC1.76□□□□□ -2.13
ATG4BQ9Y4P1 RNA5SP182-201ENST00000516064 82 ntBASIC1.76□□□□□ -2.13
ATG4BQ9Y4P1 RNU4-49P-201ENST00000516080 140 ntBASIC1.76□□□□□ -2.13
ATG4BQ9Y4P1 RNU6-1088P-201ENST00000516850 104 ntBASIC1.76□□□□□ -2.13
ATG4BQ9Y4P1 RNU6-295P-201ENST00000516901 104 ntBASIC1.76□□□□□ -2.13
ATG4BQ9Y4P1 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC1.76□□□□□ -2.13
ATG4BQ9Y4P1 AC110588.1-201ENST00000559699 137 ntBASIC1.76□□□□□ -2.13
ATG4BQ9Y4P1 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC1.76□□□□□ -2.13
ATG4BQ9Y4P1 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC1.76□□□□□ -2.13
ATG4BQ9Y4P1 FGF7P1-201ENST00000582820 288 ntBASIC1.76□□□□□ -2.13
ATG4BQ9Y4P1 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.76□□□□□ -2.13
ATG4BQ9Y4P1 AP003465.2-201ENST00000602571 373 ntBASIC1.76□□□□□ -2.13
ATG4BQ9Y4P1 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC1.76□□□□□ -2.13
ATG4BQ9Y4P1 AC130454.1-201ENST00000622948 401 ntBASIC1.76□□□□□ -2.13
ATG4BQ9Y4P1 SNORA18.2-201ENST00000383865 132 ntBASIC1.75□□□□□ -2.13
ATG4BQ9Y4P1 RNU6-784P-201ENST00000384330 106 ntBASIC1.75□□□□□ -2.13
ATG4BQ9Y4P1 RNU6-1026P-201ENST00000384465 108 ntBASIC1.75□□□□□ -2.13
ATG4BQ9Y4P1 AL356432.1-201ENST00000405809 419 ntBASIC1.75□□□□□ -2.13
ATG4BQ9Y4P1 SUMO2P12-201ENST00000405924 140 ntBASIC1.75□□□□□ -2.13
ATG4BQ9Y4P1 RNU6ATAC25P-201ENST00000408798 117 ntBASIC1.75□□□□□ -2.13
ATG4BQ9Y4P1 AC009310.1-201ENST00000414414 451 ntBASIC1.75□□□□□ -2.13
ATG4BQ9Y4P1 AL445685.2-201ENST00000422551 342 ntBASIC1.75□□□□□ -2.13
ATG4BQ9Y4P1 AL591806.2-201ENST00000433122 173 ntBASIC1.75□□□□□ -2.13
ATG4BQ9Y4P1 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC1.75□□□□□ -2.13
ATG4BQ9Y4P1 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC1.75□□□□□ -2.13
ATG4BQ9Y4P1 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC1.75□□□□□ -2.13
ATG4BQ9Y4P1 snoU13.23-201ENST00000458863 104 ntBASIC1.75□□□□□ -2.13
ATG4BQ9Y4P1 RN7SL274P-201ENST00000492268 272 ntBASIC1.75□□□□□ -2.13
ATG4BQ9Y4P1 AF186996.7-201ENST00000492781 209 ntBASIC1.75□□□□□ -2.13
ATG4BQ9Y4P1 MTCO2P30-201ENST00000503662 364 ntBASIC1.75□□□□□ -2.13
ATG4BQ9Y4P1 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC1.75□□□□□ -2.13
ATG4BQ9Y4P1 ACA59.1-201ENST00000515966 143 ntBASIC1.75□□□□□ -2.13
ATG4BQ9Y4P1 MTND4LP26-201ENST00000518144 282 ntBASIC1.75□□□□□ -2.13
ATG4BQ9Y4P1 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC1.75□□□□□ -2.13
ATG4BQ9Y4P1 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.75□□□□□ -2.13
ATG4BQ9Y4P1 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC1.75□□□□□ -2.13
ATG4BQ9Y4P1 MIR4713-201ENST00000582691 75 ntBASIC1.75□□□□□ -2.13
ATG4BQ9Y4P1 AC124303.1-201ENST00000605703 360 ntBASIC1.75□□□□□ -2.13
ATG4BQ9Y4P1 U6atac.1-201ENST00000616025 117 ntBASIC1.75□□□□□ -2.13
ATG4BQ9Y4P1 AL359757.2-201ENST00000624309 274 ntBASIC1.75□□□□□ -2.13
ATG4BQ9Y4P1 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
ATG4BQ9Y4P1 LINC02555-201ENST00000563933 1951 ntBASIC1.74□□□□□ -2.13
ATG4BQ9Y4P1 RNU1-76P-201ENST00000362903 159 ntBASIC1.74□□□□□ -2.13
ATG4BQ9Y4P1 SNORA16.1-201ENST00000364597 132 ntBASIC1.74□□□□□ -2.13
ATG4BQ9Y4P1 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.74□□□□□ -2.13
ATG4BQ9Y4P1 MIR764-201ENST00000390811 85 ntBASIC1.74□□□□□ -2.13
ATG4BQ9Y4P1 SNORA48.1-201ENST00000390879 135 ntBASIC1.74□□□□□ -2.13
ATG4BQ9Y4P1 RNA5SP489-201ENST00000410986 109 ntBASIC1.74□□□□□ -2.13
ATG4BQ9Y4P1 RPS26P42-201ENST00000413485 326 ntBASIC1.74□□□□□ -2.13
ATG4BQ9Y4P1 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC1.74□□□□□ -2.13
ATG4BQ9Y4P1 TOMM22P6-201ENST00000465035 409 ntBASIC1.74□□□□□ -2.13
ATG4BQ9Y4P1 AC087477.1-201ENST00000465747 340 ntBASIC1.74□□□□□ -2.13
ATG4BQ9Y4P1 RPS23P5-201ENST00000495419 428 ntBASIC1.74□□□□□ -2.13
ATG4BQ9Y4P1 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC1.74□□□□□ -2.13
ATG4BQ9Y4P1 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC1.74□□□□□ -2.13
ATG4BQ9Y4P1 DEFB122-202ENST00000569013 197 ntBASIC1.74□□□□□ -2.13
ATG4BQ9Y4P1 MIR3169-201ENST00000578032 83 ntBASIC1.74□□□□□ -2.13
ATG4BQ9Y4P1 AC005786.1-201ENST00000588553 154 ntBASIC1.74□□□□□ -2.13
ATG4BQ9Y4P1 AC018638.8-201ENST00000588755 281 ntBASIC1.74□□□□□ -2.13
ATG4BQ9Y4P1 AC016727.2-201ENST00000603988 621 ntBASIC1.74□□□□□ -2.13
ATG4BQ9Y4P1 BNIP3P10-201ENST00000605360 577 ntBASIC1.74□□□□□ -2.13
ATG4BQ9Y4P1 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC1.74□□□□□ -2.13
ATG4BQ9Y4P1 MIR6845-201ENST00000613182 61 ntBASIC1.74□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 200.8 ms