Protein–RNA interactions for Protein: Q9H9A6

LRRC40, Leucine-rich repeat-containing protein 40, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40Q9H9A6 SNORA29-201ENST00000384183 140 ntBASIC1.24□□□□□ -2.21
LRRC40Q9H9A6 MIR618-201ENST00000385287 98 ntBASIC1.24□□□□□ -2.21
LRRC40Q9H9A6 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.24□□□□□ -2.21
LRRC40Q9H9A6 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.24□□□□□ -2.21
LRRC40Q9H9A6 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC1.24□□□□□ -2.21
LRRC40Q9H9A6 RPL31P58-201ENST00000469001 379 ntBASIC1.24□□□□□ -2.21
LRRC40Q9H9A6 AC025465.4-201ENST00000513422 638 ntBASIC1.24□□□□□ -2.21
LRRC40Q9H9A6 MTCO2P4-201ENST00000517968 247 ntBASIC1.24□□□□□ -2.21
LRRC40Q9H9A6 AC090821.2-201ENST00000523552 176 ntBASIC1.24□□□□□ -2.21
LRRC40Q9H9A6 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC1.24□□□□□ -2.21
LRRC40Q9H9A6 AC026470.2-201ENST00000561492 181 ntBASIC1.24□□□□□ -2.21
LRRC40Q9H9A6 AC004223.2-201ENST00000590309 544 ntBASIC1.24□□□□□ -2.21
LRRC40Q9H9A6 AC016727.2-201ENST00000603988 621 ntBASIC1.24□□□□□ -2.21
LRRC40Q9H9A6 AL365434.2-201ENST00000607979 234 ntBASIC1.24□□□□□ -2.21
LRRC40Q9H9A6 HULC.1-201ENST00000612720 240 ntBASIC1.24□□□□□ -2.21
LRRC40Q9H9A6 TCL6_2.1-201ENST00000615162 119 ntBASIC1.24□□□□□ -2.21
LRRC40Q9H9A6 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.24□□□□□ -2.21
LRRC40Q9H9A6 AC005609.4-201ENST00000625071 447 ntBASIC1.24□□□□□ -2.21
LRRC40Q9H9A6 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.24□□□□□ -2.21
LRRC40Q9H9A6 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.24□□□□□ -2.21
LRRC40Q9H9A6 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.24□□□□□ -2.21
LRRC40Q9H9A6 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC1.23□□□□□ -2.21
LRRC40Q9H9A6 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC1.23□□□□□ -2.21
LRRC40Q9H9A6 SNORA72.2-201ENST00000365028 127 ntBASIC1.23□□□□□ -2.21
LRRC40Q9H9A6 AL606923.1-201ENST00000406616 190 ntBASIC1.23□□□□□ -2.21
LRRC40Q9H9A6 RNA5SP494-201ENST00000410653 129 ntBASIC1.23□□□□□ -2.21
LRRC40Q9H9A6 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC1.23□□□□□ -2.21
LRRC40Q9H9A6 AC108667.1-201ENST00000428618 249 ntBASIC1.23□□□□□ -2.21
LRRC40Q9H9A6 MTND3P9-201ENST00000429526 346 ntBASIC1.23□□□□□ -2.21
LRRC40Q9H9A6 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC1.23□□□□□ -2.21
LRRC40Q9H9A6 AC114982.1-201ENST00000469402 321 ntBASIC1.23□□□□□ -2.21
LRRC40Q9H9A6 MTND3P7-201ENST00000474435 343 ntBASIC1.23□□□□□ -2.21
LRRC40Q9H9A6 SNORA14.1-201ENST00000516113 141 ntBASIC1.23□□□□□ -2.21
LRRC40Q9H9A6 RN7SKP179-201ENST00000516126 217 ntBASIC1.23□□□□□ -2.21
LRRC40Q9H9A6 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC1.23□□□□□ -2.21
LRRC40Q9H9A6 AC023043.2-201ENST00000589678 1026 ntBASIC1.23□□□□□ -2.21
LRRC40Q9H9A6 AC073413.2-201ENST00000604332 360 ntBASIC1.23□□□□□ -2.21
LRRC40Q9H9A6 AL354950.2-201ENST00000617939 290 ntBASIC1.23□□□□□ -2.21
LRRC40Q9H9A6 MIR8065-201ENST00000620577 100 ntBASIC1.23□□□□□ -2.21
LRRC40Q9H9A6 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.23□□□□□ -2.21
LRRC40Q9H9A6 AC009033.1-201ENST00000624279 431 ntBASIC1.23□□□□□ -2.21
LRRC40Q9H9A6 MPP6-209ENST00000625307 126 ntTSL 5 BASIC1.23□□□□□ -2.21
LRRC40Q9H9A6 Y_RNA.169-201ENST00000363745 96 ntBASIC1.22□□□□□ -2.21
LRRC40Q9H9A6 RNU6-975P-201ENST00000384296 105 ntBASIC1.22□□□□□ -2.21
LRRC40Q9H9A6 RNU6-1235P-201ENST00000384559 107 ntBASIC1.22□□□□□ -2.21
LRRC40Q9H9A6 MIR513A1-201ENST00000385138 129 ntBASIC1.22□□□□□ -2.21
LRRC40Q9H9A6 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC1.22□□□□□ -2.21
LRRC40Q9H9A6 TOMM22P2-201ENST00000430735 237 ntBASIC1.22□□□□□ -2.21
LRRC40Q9H9A6 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC1.22□□□□□ -2.21
LRRC40Q9H9A6 AC073415.1-201ENST00000449240 153 ntBASIC1.22□□□□□ -2.21
LRRC40Q9H9A6 RNU7-34P-201ENST00000459394 64 ntBASIC1.22□□□□□ -2.21
LRRC40Q9H9A6 RNU6-498P-201ENST00000459468 107 ntBASIC1.22□□□□□ -2.21
LRRC40Q9H9A6 RPS29P27-201ENST00000463711 170 ntBASIC1.22□□□□□ -2.21
LRRC40Q9H9A6 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC1.22□□□□□ -2.21
LRRC40Q9H9A6 CCDC34P1-201ENST00000507441 517 ntBASIC1.22□□□□□ -2.21
LRRC40Q9H9A6 AL512310.8-201ENST00000550183 120 ntBASIC1.22□□□□□ -2.21
LRRC40Q9H9A6 AP000907.4-201ENST00000604143 237 ntBASIC1.22□□□□□ -2.21
LRRC40Q9H9A6 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.22□□□□□ -2.21
LRRC40Q9H9A6 snoU2-30.2-201ENST00000362805 70 ntBASIC1.21□□□□□ -2.22
LRRC40Q9H9A6 RNU5A-6P-201ENST00000384136 116 ntBASIC1.21□□□□□ -2.22
LRRC40Q9H9A6 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC1.21□□□□□ -2.22
LRRC40Q9H9A6 NFU1P2-201ENST00000448700 469 ntBASIC1.21□□□□□ -2.22
LRRC40Q9H9A6 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC1.21□□□□□ -2.22
LRRC40Q9H9A6 U8.21-201ENST00000459536 136 ntBASIC1.21□□□□□ -2.22
LRRC40Q9H9A6 AL133373.1-201ENST00000497098 94 ntBASIC1.21□□□□□ -2.22
LRRC40Q9H9A6 AC010493.1-201ENST00000513479 292 ntBASIC1.21□□□□□ -2.22
LRRC40Q9H9A6 RNU6-1146P-201ENST00000516282 102 ntBASIC1.21□□□□□ -2.22
LRRC40Q9H9A6 IGHVII-53-1-201ENST00000519538 255 ntBASIC1.21□□□□□ -2.22
LRRC40Q9H9A6 AL442163.3-201ENST00000554110 156 ntBASIC1.21□□□□□ -2.22
LRRC40Q9H9A6 MZT1P2-201ENST00000604387 248 ntBASIC1.21□□□□□ -2.22
LRRC40Q9H9A6 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC1.21□□□□□ -2.22
LRRC40Q9H9A6 AC064836.2-201ENST00000609491 462 ntBASIC1.21□□□□□ -2.22
LRRC40Q9H9A6 AC040896.1-201ENST00000613819 479 ntBASIC1.21□□□□□ -2.22
LRRC40Q9H9A6 AL353770.2-201ENST00000620024 78 ntBASIC1.21□□□□□ -2.22
LRRC40Q9H9A6 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC1.2□□□□□ -2.22
LRRC40Q9H9A6 SNORA33-201ENST00000363664 130 ntBASIC1.2□□□□□ -2.22
LRRC40Q9H9A6 RNA5SP99-201ENST00000364020 114 ntBASIC1.2□□□□□ -2.22
LRRC40Q9H9A6 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC1.2□□□□□ -2.22
LRRC40Q9H9A6 RPL37P10-201ENST00000412884 288 ntBASIC1.2□□□□□ -2.22
LRRC40Q9H9A6 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC1.2□□□□□ -2.22
LRRC40Q9H9A6 HMGN2P34-201ENST00000437647 269 ntBASIC1.2□□□□□ -2.22
LRRC40Q9H9A6 HMGN1P12-201ENST00000499125 195 ntBASIC1.2□□□□□ -2.22
LRRC40Q9H9A6 RNU4ATAC8P-201ENST00000516196 109 ntBASIC1.2□□□□□ -2.22
LRRC40Q9H9A6 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC1.2□□□□□ -2.22
LRRC40Q9H9A6 AL050343.2-201ENST00000607338 280 ntBASIC1.2□□□□□ -2.22
LRRC40Q9H9A6 AC006001.4-201ENST00000622243 395 ntBASIC1.2□□□□□ -2.22
LRRC40Q9H9A6 AC099654.5-201ENST00000636479 350 ntBASIC1.2□□□□□ -2.22
LRRC40Q9H9A6 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC1.19□□□□□ -2.22
LRRC40Q9H9A6 RNU5B-2P-201ENST00000363036 113 ntBASIC1.19□□□□□ -2.22
LRRC40Q9H9A6 RNU6-534P-201ENST00000364877 106 ntBASIC1.19□□□□□ -2.22
LRRC40Q9H9A6 RNA5SP259-201ENST00000365541 109 ntBASIC1.19□□□□□ -2.22
LRRC40Q9H9A6 RNU6-417P-201ENST00000384712 107 ntBASIC1.19□□□□□ -2.22
LRRC40Q9H9A6 MIR515-2-201ENST00000384883 83 ntBASIC1.19□□□□□ -2.22
LRRC40Q9H9A6 MIR515-1-201ENST00000384884 83 ntBASIC1.19□□□□□ -2.22
LRRC40Q9H9A6 MIR549A-201ENST00000385268 96 ntBASIC1.19□□□□□ -2.22
LRRC40Q9H9A6 MIR1253-201ENST00000408273 105 ntBASIC1.19□□□□□ -2.22
LRRC40Q9H9A6 RN7SKP142-201ENST00000411236 328 ntBASIC1.19□□□□□ -2.22
LRRC40Q9H9A6 RPS26P42-201ENST00000413485 326 ntBASIC1.19□□□□□ -2.22
LRRC40Q9H9A6 AP1B1P2-201ENST00000416196 106 ntBASIC1.19□□□□□ -2.22
LRRC40Q9H9A6 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC1.19□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 168.9 ms