Protein–RNA interactions for Protein: Q96BQ3

TRIM43, Tripartite motif-containing protein 43, humanhuman

Predicted RBP Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43Q96BQ3 MIR27B-201ENST00000385129 97 ntBASIC2.86□□□□□ -1.95
TRIM43Q96BQ3 RNU6-482P-201ENST00000391068 107 ntBASIC2.86□□□□□ -1.95
TRIM43Q96BQ3 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC2.86□□□□□ -1.95
TRIM43Q96BQ3 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.86□□□□□ -1.95
TRIM43Q96BQ3 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
TRIM43Q96BQ3 AC245166.1-201ENST00000521012 253 ntBASIC2.86□□□□□ -1.95
TRIM43Q96BQ3 HSBP1P1-201ENST00000555205 166 ntBASIC2.86□□□□□ -1.95
TRIM43Q96BQ3 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC2.86□□□□□ -1.95
TRIM43Q96BQ3 TEX41-243ENST00000614173 190 ntTSL 5 BASIC2.86□□□□□ -1.95
TRIM43Q96BQ3 AC087588.2-201ENST00000617667 426 ntBASIC2.86□□□□□ -1.95
TRIM43Q96BQ3 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC2.86□□□□□ -1.95
TRIM43Q96BQ3 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
TRIM43Q96BQ3 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
TRIM43Q96BQ3 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC2.85□□□□□ -1.95
TRIM43Q96BQ3 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC2.85□□□□□ -1.95
TRIM43Q96BQ3 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
TRIM43Q96BQ3 MTND5P16-201ENST00000460269 1703 ntBASIC2.85□□□□□ -1.95
TRIM43Q96BQ3 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
TRIM43Q96BQ3 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC2.85□□□□□ -1.95
TRIM43Q96BQ3 RNU6-137P-201ENST00000363680 108 ntBASIC2.85□□□□□ -1.95
TRIM43Q96BQ3 U3.9-201ENST00000363823 204 ntBASIC2.85□□□□□ -1.95
TRIM43Q96BQ3 SNORA46.1-201ENST00000391069 153 ntBASIC2.85□□□□□ -1.95
TRIM43Q96BQ3 RNU6ATAC15P-201ENST00000408279 121 ntBASIC2.85□□□□□ -1.95
TRIM43Q96BQ3 Y_RNA.592-201ENST00000410274 109 ntBASIC2.85□□□□□ -1.95
TRIM43Q96BQ3 RNA5SP201-201ENST00000410316 124 ntBASIC2.85□□□□□ -1.95
TRIM43Q96BQ3 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.85□□□□□ -1.95
TRIM43Q96BQ3 AC096644.2-201ENST00000429278 159 ntBASIC2.85□□□□□ -1.95
TRIM43Q96BQ3 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC2.85□□□□□ -1.95
TRIM43Q96BQ3 RN7SL499P-201ENST00000481141 276 ntBASIC2.85□□□□□ -1.95
TRIM43Q96BQ3 RNU4-77P-201ENST00000516692 156 ntBASIC2.85□□□□□ -1.95
TRIM43Q96BQ3 RNA5SP54-201ENST00000516951 92 ntBASIC2.85□□□□□ -1.95
TRIM43Q96BQ3 EIF4A1P12-201ENST00000551910 141 ntBASIC2.85□□□□□ -1.95
TRIM43Q96BQ3 AC006600.1-201ENST00000572529 153 ntBASIC2.85□□□□□ -1.95
TRIM43Q96BQ3 AC090617.3-201ENST00000573670 475 ntBASIC2.85□□□□□ -1.95
TRIM43Q96BQ3 PCGEM1.1-201ENST00000613431 131 ntBASIC2.85□□□□□ -1.95
TRIM43Q96BQ3 U2.1-201ENST00000618978 145 ntBASIC2.85□□□□□ -1.95
TRIM43Q96BQ3 MIR5739-201ENST00000619803 80 ntBASIC2.85□□□□□ -1.95
TRIM43Q96BQ3 U4.3-201ENST00000621047 82 ntBASIC2.85□□□□□ -1.95
TRIM43Q96BQ3 MIR4272-201ENST00000635924 64 ntBASIC2.85□□□□□ -1.95
TRIM43Q96BQ3 AC005592.1-201ENST00000566527 1640 ntBASIC2.85□□□□□ -1.95
TRIM43Q96BQ3 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC2.84□□□□□ -1.95
TRIM43Q96BQ3 RNU6-222P-201ENST00000362438 107 ntBASIC2.84□□□□□ -1.95
TRIM43Q96BQ3 RNU6-378P-201ENST00000384324 107 ntBASIC2.84□□□□□ -1.95
TRIM43Q96BQ3 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC2.84□□□□□ -1.95
TRIM43Q96BQ3 MRPL42P3-201ENST00000401492 326 ntBASIC2.84□□□□□ -1.95
TRIM43Q96BQ3 MIR320B2-201ENST00000408479 138 ntBASIC2.84□□□□□ -1.95
TRIM43Q96BQ3 AL135786.1-201ENST00000415892 214 ntBASIC2.84□□□□□ -1.95
TRIM43Q96BQ3 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC2.84□□□□□ -1.95
TRIM43Q96BQ3 AL160004.2-201ENST00000432935 350 ntBASIC2.84□□□□□ -1.95
TRIM43Q96BQ3 HMGN2P3-201ENST00000433603 273 ntBASIC2.84□□□□□ -1.95
TRIM43Q96BQ3 HMGN2P5-201ENST00000436882 273 ntBASIC2.84□□□□□ -1.95
TRIM43Q96BQ3 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC2.84□□□□□ -1.95
TRIM43Q96BQ3 AP000870.1-201ENST00000472927 406 ntBASIC2.84□□□□□ -1.95
TRIM43Q96BQ3 RNU6-1114P-201ENST00000516022 107 ntBASIC2.84□□□□□ -1.95
TRIM43Q96BQ3 RNU6-475P-201ENST00000516073 104 ntBASIC2.84□□□□□ -1.95
TRIM43Q96BQ3 RNU6-548P-201ENST00000517083 115 ntBASIC2.84□□□□□ -1.95
TRIM43Q96BQ3 RNU6-58P-201ENST00000517143 103 ntBASIC2.84□□□□□ -1.95
TRIM43Q96BQ3 MIR2355-201ENST00000517199 87 ntBASIC2.84□□□□□ -1.95
TRIM43Q96BQ3 RNU6-586P-201ENST00000517265 104 ntBASIC2.84□□□□□ -1.95
TRIM43Q96BQ3 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC2.84□□□□□ -1.95
TRIM43Q96BQ3 AC027288.2-201ENST00000553028 243 ntBASIC2.84□□□□□ -1.95
TRIM43Q96BQ3 MIR3117-201ENST00000584034 78 ntBASIC2.84□□□□□ -1.95
TRIM43Q96BQ3 VN1R91P-201ENST00000594377 169 ntBASIC2.84□□□□□ -1.95
TRIM43Q96BQ3 AC022432.1-201ENST00000595739 310 ntBASIC2.84□□□□□ -1.95
TRIM43Q96BQ3 AL713866.2-201ENST00000603579 219 ntBASIC2.84□□□□□ -1.95
TRIM43Q96BQ3 AL356280.1-201ENST00000603614 379 ntBASIC2.84□□□□□ -1.95
TRIM43Q96BQ3 AL132822.1-201ENST00000617063 513 ntBASIC2.84□□□□□ -1.95
TRIM43Q96BQ3 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.84□□□□□ -1.95
TRIM43Q96BQ3 AC008121.3-201ENST00000618726 433 ntBASIC2.84□□□□□ -1.95
TRIM43Q96BQ3 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.83□□□□□ -1.96
TRIM43Q96BQ3 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
TRIM43Q96BQ3 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC2.83□□□□□ -1.96
TRIM43Q96BQ3 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.83□□□□□ -1.96
TRIM43Q96BQ3 RNU1-72P-201ENST00000362976 153 ntBASIC2.83□□□□□ -1.96
TRIM43Q96BQ3 Y_RNA.80-201ENST00000362996 102 ntBASIC2.83□□□□□ -1.96
TRIM43Q96BQ3 SNORD115-8-201ENST00000363856 82 ntBASIC2.83□□□□□ -1.96
TRIM43Q96BQ3 Y_RNA.238-201ENST00000364441 102 ntBASIC2.83□□□□□ -1.96
TRIM43Q96BQ3 SNORA51.4-201ENST00000364993 124 ntBASIC2.83□□□□□ -1.96
TRIM43Q96BQ3 SNORD115-38-201ENST00000365037 82 ntBASIC2.83□□□□□ -1.96
TRIM43Q96BQ3 MIR487A-201ENST00000385009 80 ntBASIC2.83□□□□□ -1.96
TRIM43Q96BQ3 RNU6ATAC40P-201ENST00000408580 137 ntBASIC2.83□□□□□ -1.96
TRIM43Q96BQ3 MTCO3P19-201ENST00000415864 321 ntBASIC2.83□□□□□ -1.96
TRIM43Q96BQ3 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC2.83□□□□□ -1.96
TRIM43Q96BQ3 CYP2C59P-201ENST00000457790 269 ntBASIC2.83□□□□□ -1.96
TRIM43Q96BQ3 RN7SL636P-201ENST00000497504 294 ntBASIC2.83□□□□□ -1.96
TRIM43Q96BQ3 Y_RNA.673-201ENST00000516306 88 ntBASIC2.83□□□□□ -1.96
TRIM43Q96BQ3 SCARNA15.1-201ENST00000516384 125 ntBASIC2.83□□□□□ -1.96
TRIM43Q96BQ3 HSPE1P18-201ENST00000517602 280 ntBASIC2.83□□□□□ -1.96
TRIM43Q96BQ3 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC2.83□□□□□ -1.96
TRIM43Q96BQ3 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC2.83□□□□□ -1.96
TRIM43Q96BQ3 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.83□□□□□ -1.96
TRIM43Q96BQ3 MPP6-209ENST00000625307 126 ntTSL 5 BASIC2.83□□□□□ -1.96
TRIM43Q96BQ3 AC108206.1-201ENST00000570186 4159 ntBASIC2.83□□□□□ -1.96
TRIM43Q96BQ3 MTND4P1-201ENST00000457501 1466 ntBASIC2.83□□□□□ -1.96
TRIM43Q96BQ3 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
TRIM43Q96BQ3 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.82□□□□□ -1.96
TRIM43Q96BQ3 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC2.82□□□□□ -1.96
TRIM43Q96BQ3 Y_RNA.158-201ENST00000363651 101 ntBASIC2.82□□□□□ -1.96
TRIM43Q96BQ3 RNU5F-3P-201ENST00000363767 117 ntBASIC2.82□□□□□ -1.96
TRIM43Q96BQ3 SET-203ENST00000372688 801 ntTSL 2 BASIC2.82□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 168.1 ms