Protein–RNA interactions for Protein: Q6A162

KRT40, Keratin, type I cytoskeletal 40, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT40Q6A162 RNU6-142P-201ENST00000384019 107 ntBASIC3.24□□□□□ -1.89
KRT40Q6A162 Y_RNA.478-201ENST00000384358 107 ntBASIC3.24□□□□□ -1.89
KRT40Q6A162 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
KRT40Q6A162 RNU6-159P-201ENST00000391080 106 ntBASIC3.24□□□□□ -1.89
KRT40Q6A162 AL590004.2-201ENST00000404787 371 ntBASIC3.24□□□□□ -1.89
KRT40Q6A162 Y_RNA.602-201ENST00000410535 92 ntBASIC3.24□□□□□ -1.89
KRT40Q6A162 AC004383.1-201ENST00000438135 289 ntBASIC3.24□□□□□ -1.89
KRT40Q6A162 RPL39P29-201ENST00000447779 157 ntBASIC3.24□□□□□ -1.89
KRT40Q6A162 RPS23P5-201ENST00000495419 428 ntBASIC3.24□□□□□ -1.89
KRT40Q6A162 AC008413.1-201ENST00000511864 177 ntBASIC3.24□□□□□ -1.89
KRT40Q6A162 RNU6-138P-201ENST00000515952 107 ntBASIC3.24□□□□□ -1.89
KRT40Q6A162 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC3.24□□□□□ -1.89
KRT40Q6A162 AC091152.3-201ENST00000604227 325 ntBASIC3.24□□□□□ -1.89
KRT40Q6A162 AC002076.2-201ENST00000617362 122 ntBASIC3.24□□□□□ -1.89
KRT40Q6A162 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC3.24□□□□□ -1.89
KRT40Q6A162 AL136164.4-201ENST00000625013 2135 ntBASIC3.23□□□□□ -1.89
KRT40Q6A162 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC3.23□□□□□ -1.89
KRT40Q6A162 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC3.23□□□□□ -1.89
KRT40Q6A162 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC3.23□□□□□ -1.89
KRT40Q6A162 AC010680.1-201ENST00000590024 3590 ntBASIC3.23□□□□□ -1.89
KRT40Q6A162 SNORD115-8-201ENST00000363856 82 ntBASIC3.23□□□□□ -1.89
KRT40Q6A162 SNORD115-38-201ENST00000365037 82 ntBASIC3.23□□□□□ -1.89
KRT40Q6A162 SNORD58.1-201ENST00000391313 66 ntBASIC3.23□□□□□ -1.89
KRT40Q6A162 MIR887-201ENST00000401258 79 ntBASIC3.23□□□□□ -1.89
KRT40Q6A162 AL603910.2-201ENST00000407268 136 ntBASIC3.23□□□□□ -1.89
KRT40Q6A162 MIR548H3-201ENST00000408771 118 ntBASIC3.23□□□□□ -1.89
KRT40Q6A162 SNORD12B-201ENST00000410433 91 ntBASIC3.23□□□□□ -1.89
KRT40Q6A162 RNA5SP38-201ENST00000410750 119 ntBASIC3.23□□□□□ -1.89
KRT40Q6A162 AL590135.1-201ENST00000422215 156 ntBASIC3.23□□□□□ -1.89
KRT40Q6A162 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC3.23□□□□□ -1.89
KRT40Q6A162 AC078809.1-201ENST00000427601 140 ntBASIC3.23□□□□□ -1.89
KRT40Q6A162 RPS15AP5-201ENST00000436276 388 ntBASIC3.23□□□□□ -1.89
KRT40Q6A162 AC005002.2-201ENST00000438228 269 ntBASIC3.23□□□□□ -1.89
KRT40Q6A162 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC3.23□□□□□ -1.89
KRT40Q6A162 RNU5F-8P-201ENST00000515941 111 ntBASIC3.23□□□□□ -1.89
KRT40Q6A162 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC3.23□□□□□ -1.89
KRT40Q6A162 MIR5695-201ENST00000579717 85 ntBASIC3.23□□□□□ -1.89
KRT40Q6A162 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
KRT40Q6A162 AC004832.5-201ENST00000608677 401 ntBASIC3.23□□□□□ -1.89
KRT40Q6A162 AL359198.2-201ENST00000611836 194 ntBASIC3.23□□□□□ -1.89
KRT40Q6A162 MIR3199-2-201ENST00000636243 86 ntBASIC3.23□□□□□ -1.89
KRT40Q6A162 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC3.23□□□□□ -1.89
KRT40Q6A162 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC3.23□□□□□ -1.89
KRT40Q6A162 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC3.23□□□□□ -1.89
KRT40Q6A162 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.23□□□□□ -1.89
KRT40Q6A162 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC3.22□□□□□ -1.89
KRT40Q6A162 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC3.22□□□□□ -1.89
KRT40Q6A162 AC092268.1-201ENST00000342691 405 ntBASIC3.22□□□□□ -1.89
KRT40Q6A162 Y_RNA.286-201ENST00000364813 102 ntBASIC3.22□□□□□ -1.89
KRT40Q6A162 RNU6-198P-201ENST00000384258 104 ntBASIC3.22□□□□□ -1.89
KRT40Q6A162 SNORD63-201ENST00000384262 68 ntBASIC3.22□□□□□ -1.89
KRT40Q6A162 MIR329-1-201ENST00000385028 80 ntBASIC3.22□□□□□ -1.89
KRT40Q6A162 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
KRT40Q6A162 RNA5SP390-201ENST00000410191 113 ntBASIC3.22□□□□□ -1.89
KRT40Q6A162 RNU2-49P-201ENST00000410666 184 ntBASIC3.22□□□□□ -1.89
KRT40Q6A162 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC3.22□□□□□ -1.89
KRT40Q6A162 AL513477.1-202ENST00000417061 214 ntBASIC3.22□□□□□ -1.89
KRT40Q6A162 AL139109.1-201ENST00000455491 297 ntBASIC3.22□□□□□ -1.89
KRT40Q6A162 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.22□□□□□ -1.89
KRT40Q6A162 SNORA31.6-201ENST00000516241 130 ntBASIC3.22□□□□□ -1.89
KRT40Q6A162 MDM2-232ENST00000544561 213 ntTSL 5 BASIC3.22□□□□□ -1.89
KRT40Q6A162 MIR4643-201ENST00000577473 78 ntBASIC3.22□□□□□ -1.89
KRT40Q6A162 MIR4423-201ENST00000580922 80 ntBASIC3.22□□□□□ -1.89
KRT40Q6A162 AC005296.1-201ENST00000616145 209 ntBASIC3.22□□□□□ -1.89
KRT40Q6A162 AC127459.3-201ENST00000624328 466 ntBASIC3.22□□□□□ -1.89
KRT40Q6A162 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
KRT40Q6A162 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
KRT40Q6A162 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.89
KRT40Q6A162 AC009487.2-201ENST00000420969 6821 ntBASIC3.21□□□□□ -1.9
KRT40Q6A162 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
KRT40Q6A162 Y_RNA.352-201ENST00000365439 102 ntBASIC3.21□□□□□ -1.9
KRT40Q6A162 RNU6-541P-201ENST00000384709 110 ntBASIC3.21□□□□□ -1.9
KRT40Q6A162 RNA5SP252-201ENST00000391131 119 ntBASIC3.21□□□□□ -1.9
KRT40Q6A162 AL133475.1-201ENST00000404414 305 ntBASIC3.21□□□□□ -1.9
KRT40Q6A162 AC063976.3-201ENST00000426849 329 ntBASIC3.21□□□□□ -1.9
KRT40Q6A162 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC3.21□□□□□ -1.9
KRT40Q6A162 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC3.21□□□□□ -1.9
KRT40Q6A162 RN7SKP49-201ENST00000516675 260 ntBASIC3.21□□□□□ -1.9
KRT40Q6A162 POC1B-211ENST00000549504 581 ntTSL 5 BASIC3.21□□□□□ -1.9
KRT40Q6A162 AC021231.3-201ENST00000558497 370 ntBASIC3.21□□□□□ -1.9
KRT40Q6A162 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC3.21□□□□□ -1.9
KRT40Q6A162 MIR4524B-201ENST00000581569 115 ntBASIC3.21□□□□□ -1.9
KRT40Q6A162 ZNF861P-201ENST00000588126 639 ntBASIC3.21□□□□□ -1.9
KRT40Q6A162 AC009779.6-201ENST00000603972 165 ntBASIC3.21□□□□□ -1.9
KRT40Q6A162 AL357075.2-201ENST00000614906 189 ntBASIC3.21□□□□□ -1.9
KRT40Q6A162 AC006111.3-201ENST00000622137 383 ntBASIC3.21□□□□□ -1.9
KRT40Q6A162 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC3.21□□□□□ -1.9
KRT40Q6A162 MAPK10-266ENST00000641066 6555 ntBASIC3.21□□□□□ -1.9
KRT40Q6A162 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
KRT40Q6A162 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
KRT40Q6A162 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC3.21□□□□□ -1.9
KRT40Q6A162 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
KRT40Q6A162 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC3.2□□□□□ -1.9
KRT40Q6A162 Y_RNA.40-201ENST00000362645 93 ntBASIC3.2□□□□□ -1.9
KRT40Q6A162 RNU6-137P-201ENST00000363680 108 ntBASIC3.2□□□□□ -1.9
KRT40Q6A162 RNU6-961P-201ENST00000363893 105 ntBASIC3.2□□□□□ -1.9
KRT40Q6A162 RNU6-200P-201ENST00000364743 107 ntBASIC3.2□□□□□ -1.9
KRT40Q6A162 SNORA70B-201ENST00000384210 135 ntBASIC3.2□□□□□ -1.9
KRT40Q6A162 RNU6-1145P-201ENST00000384246 107 ntBASIC3.2□□□□□ -1.9
KRT40Q6A162 Y_RNA.515-201ENST00000384535 112 ntBASIC3.2□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 192.5 ms