Protein–RNA interactions for Protein: P08254

MMP3, Stromelysin-1, humanhuman

Predictions only

Length 477 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP3P08254 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC2.55□□□□□ -2
MMP3P08254 MIR5571-201ENST00000577998 113 ntBASIC2.55□□□□□ -2
MMP3P08254 AC103810.1-201ENST00000579873 453 ntBASIC2.55□□□□□ -2
MMP3P08254 AL034555.1-201ENST00000604816 211 ntBASIC2.55□□□□□ -2
MMP3P08254 AC083806.3-201ENST00000614016 455 ntBASIC2.55□□□□□ -2
MMP3P08254 MIR6733-201ENST00000635723 61 ntBASIC2.55□□□□□ -2
MMP3P08254 AC092268.1-201ENST00000342691 405 ntBASIC2.54□□□□□ -2
MMP3P08254 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC2.54□□□□□ -2
MMP3P08254 RNU4-42P-201ENST00000364738 142 ntBASIC2.54□□□□□ -2
MMP3P08254 RNU4-9P-201ENST00000364951 139 ntBASIC2.54□□□□□ -2
MMP3P08254 Y_RNA.364-201ENST00000365532 101 ntBASIC2.54□□□□□ -2
MMP3P08254 RNU6-1032P-201ENST00000384100 107 ntBASIC2.54□□□□□ -2
MMP3P08254 SNORA26.3-201ENST00000391119 136 ntBASIC2.54□□□□□ -2
MMP3P08254 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC2.54□□□□□ -2
MMP3P08254 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC2.54□□□□□ -2
MMP3P08254 AC078809.1-201ENST00000427601 140 ntBASIC2.54□□□□□ -2
MMP3P08254 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC2.54□□□□□ -2
MMP3P08254 snoU13.30-201ENST00000458951 104 ntBASIC2.54□□□□□ -2
MMP3P08254 RN7SKP210-201ENST00000459176 261 ntBASIC2.54□□□□□ -2
MMP3P08254 RPL23AP70-201ENST00000483361 460 ntBASIC2.54□□□□□ -2
MMP3P08254 HMGB1P35-201ENST00000503360 598 ntBASIC2.54□□□□□ -2
MMP3P08254 RNA5SP112-201ENST00000515937 99 ntBASIC2.54□□□□□ -2
MMP3P08254 RN7SKP40-201ENST00000517211 242 ntBASIC2.54□□□□□ -2
MMP3P08254 SCARNA11.3-201ENST00000517276 130 ntBASIC2.54□□□□□ -2
MMP3P08254 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC2.54□□□□□ -2
MMP3P08254 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC2.54□□□□□ -2
MMP3P08254 AC021231.3-201ENST00000558497 370 ntBASIC2.54□□□□□ -2
MMP3P08254 AL356157.2-201ENST00000605122 111 ntBASIC2.54□□□□□ -2
MMP3P08254 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC2.54□□□□□ -2
MMP3P08254 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC2.54□□□□□ -2
MMP3P08254 AC087588.2-201ENST00000617667 426 ntBASIC2.54□□□□□ -2
MMP3P08254 AC091925.1-201ENST00000623204 462 ntBASIC2.54□□□□□ -2
MMP3P08254 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC2.54□□□□□ -2
MMP3P08254 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.54□□□□□ -2
MMP3P08254 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC2.54□□□□□ -2
MMP3P08254 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.53□□□□□ -2
MMP3P08254 Z82195.2-201ENST00000612348 18351 ntBASIC2.53□□□□□ -2
MMP3P08254 AC080128.1-201ENST00000474389 1917 ntBASIC2.53□□□□□ -2
MMP3P08254 MIR21-201ENST00000362134 72 ntBASIC2.53□□□□□ -2
MMP3P08254 RNU1-72P-201ENST00000362976 153 ntBASIC2.53□□□□□ -2
MMP3P08254 Y_RNA.106-201ENST00000363189 100 ntBASIC2.53□□□□□ -2
MMP3P08254 RNU6-1210P-201ENST00000363775 107 ntBASIC2.53□□□□□ -2
MMP3P08254 Y_RNA.202-201ENST00000364083 110 ntBASIC2.53□□□□□ -2
MMP3P08254 SNORA33.2-201ENST00000365413 134 ntBASIC2.53□□□□□ -2
MMP3P08254 MIR627-201ENST00000384979 97 ntBASIC2.53□□□□□ -2
MMP3P08254 MIR221-201ENST00000385135 110 ntBASIC2.53□□□□□ -2
MMP3P08254 CYCSP48-201ENST00000417124 323 ntBASIC2.53□□□□□ -2
MMP3P08254 AC007098.1-201ENST00000420122 367 ntBASIC2.53□□□□□ -2
MMP3P08254 MTCYBP10-201ENST00000424905 650 ntBASIC2.53□□□□□ -2
MMP3P08254 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC2.53□□□□□ -2
MMP3P08254 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC2.53□□□□□ -2
MMP3P08254 AC099799.1-201ENST00000439809 192 ntBASIC2.53□□□□□ -2
MMP3P08254 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.53□□□□□ -2
MMP3P08254 U8.22-201ENST00000459141 133 ntBASIC2.53□□□□□ -2
MMP3P08254 snoU13.14-201ENST00000459372 104 ntBASIC2.53□□□□□ -2
MMP3P08254 RPL22P13-201ENST00000493291 347 ntBASIC2.53□□□□□ -2
MMP3P08254 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC2.53□□□□□ -2
MMP3P08254 RNU4-77P-201ENST00000516692 156 ntBASIC2.53□□□□□ -2
MMP3P08254 Y_RNA.706-201ENST00000516933 99 ntBASIC2.53□□□□□ -2
MMP3P08254 RNU6-988P-201ENST00000519081 107 ntBASIC2.53□□□□□ -2
MMP3P08254 AC115990.1-201ENST00000526957 301 ntBASIC2.53□□□□□ -2
MMP3P08254 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC2.53□□□□□ -2
MMP3P08254 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC2.53□□□□□ -2
MMP3P08254 RPL30P11-203ENST00000598995 310 ntBASIC2.53□□□□□ -2
MMP3P08254 SNORD58B-201ENST00000607313 66 ntBASIC2.53□□□□□ -2
MMP3P08254 AC090517.3-201ENST00000625170 141 ntBASIC2.53□□□□□ -2
MMP3P08254 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC2.53□□□□□ -2
MMP3P08254 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC2.52□□□□□ -2.01
MMP3P08254 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
MMP3P08254 SNORA68.1-201ENST00000364537 132 ntBASIC2.52□□□□□ -2.01
MMP3P08254 Y_RNA.358-201ENST00000365491 99 ntBASIC2.52□□□□□ -2.01
MMP3P08254 U8.10-201ENST00000384260 133 ntBASIC2.52□□□□□ -2.01
MMP3P08254 MIR625-201ENST00000385047 85 ntBASIC2.52□□□□□ -2.01
MMP3P08254 MIR190B-201ENST00000401119 79 ntBASIC2.52□□□□□ -2.01
MMP3P08254 AC012306.1-201ENST00000423267 114 ntBASIC2.52□□□□□ -2.01
MMP3P08254 RPS27AP9-201ENST00000477681 438 ntBASIC2.52□□□□□ -2.01
MMP3P08254 RNU7-175P-201ENST00000515915 61 ntBASIC2.52□□□□□ -2.01
MMP3P08254 RNU6-1137P-201ENST00000517073 99 ntBASIC2.52□□□□□ -2.01
MMP3P08254 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.52□□□□□ -2.01
MMP3P08254 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC2.52□□□□□ -2.01
MMP3P08254 7SK.7-201ENST00000603504 247 ntBASIC2.52□□□□□ -2.01
MMP3P08254 AC100812.1-201ENST00000607622 580 ntBASIC2.52□□□□□ -2.01
MMP3P08254 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.52□□□□□ -2.01
MMP3P08254 MIR6766-201ENST00000622641 72 ntBASIC2.52□□□□□ -2.01
MMP3P08254 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC2.52□□□□□ -2.01
MMP3P08254 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.52□□□□□ -2.01
MMP3P08254 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
MMP3P08254 AC091812.1-201ENST00000432235 1948 ntBASIC2.52□□□□□ -2.01
MMP3P08254 AP000560.1-201ENST00000624150 1937 ntBASIC2.52□□□□□ -2.01
MMP3P08254 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.51□□□□□ -2.01
MMP3P08254 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
MMP3P08254 RNU4-15P-201ENST00000362613 141 ntBASIC2.51□□□□□ -2.01
MMP3P08254 RNU6-486P-201ENST00000363116 107 ntBASIC2.51□□□□□ -2.01
MMP3P08254 SNORA64-201ENST00000384674 134 ntBASIC2.51□□□□□ -2.01
MMP3P08254 SNORA12-201ENST00000391162 147 ntBASIC2.51□□□□□ -2.01
MMP3P08254 MIR208B-201ENST00000401172 77 ntBASIC2.51□□□□□ -2.01
MMP3P08254 Y_RNA.605-201ENST00000410577 105 ntBASIC2.51□□□□□ -2.01
MMP3P08254 AC113618.1-201ENST00000416747 285 ntBASIC2.51□□□□□ -2.01
MMP3P08254 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC2.51□□□□□ -2.01
MMP3P08254 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC2.51□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 174.9 ms