Protein–RNA interactions for Protein: O60500

NPHS1, Nephrin, humanhuman

Predictions only

Length 1,241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHS1O60500 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC3.29□□□□□ -1.88
NPHS1O60500 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC3.29□□□□□ -1.88
NPHS1O60500 AC091179.1-201ENST00000461606 579 ntBASIC3.29□□□□□ -1.88
NPHS1O60500 APOA2-205ENST00000468465 421 ntTSL 2 BASIC3.29□□□□□ -1.88
NPHS1O60500 RNU6-1278P-201ENST00000516130 107 ntBASIC3.29□□□□□ -1.88
NPHS1O60500 AC068657.1-201ENST00000520807 306 ntBASIC3.29□□□□□ -1.88
NPHS1O60500 AP005660.1-201ENST00000522972 293 ntBASIC3.29□□□□□ -1.88
NPHS1O60500 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC3.29□□□□□ -1.88
NPHS1O60500 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC3.29□□□□□ -1.88
NPHS1O60500 AL008718.3-201ENST00000610217 321 ntBASIC3.29□□□□□ -1.88
NPHS1O60500 AC006133.1-201ENST00000617106 264 ntBASIC3.29□□□□□ -1.88
NPHS1O60500 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
NPHS1O60500 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
NPHS1O60500 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
NPHS1O60500 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC3.28□□□□□ -1.88
NPHS1O60500 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
NPHS1O60500 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.28□□□□□ -1.88
NPHS1O60500 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
NPHS1O60500 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.28□□□□□ -1.88
NPHS1O60500 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.28□□□□□ -1.88
NPHS1O60500 RNU6-324P-201ENST00000363957 106 ntBASIC3.28□□□□□ -1.88
NPHS1O60500 Y_RNA.240-201ENST00000364469 95 ntBASIC3.28□□□□□ -1.88
NPHS1O60500 Y_RNA.304-201ENST00000365011 112 ntBASIC3.28□□□□□ -1.88
NPHS1O60500 BTF3P11-201ENST00000426582 477 ntBASIC3.28□□□□□ -1.88
NPHS1O60500 AC009414.1-201ENST00000427200 443 ntBASIC3.28□□□□□ -1.88
NPHS1O60500 RPS27P26-201ENST00000494583 239 ntBASIC3.28□□□□□ -1.88
NPHS1O60500 RN7SKP18-201ENST00000516005 275 ntBASIC3.28□□□□□ -1.88
NPHS1O60500 RNU6-1219P-201ENST00000516143 112 ntBASIC3.28□□□□□ -1.88
NPHS1O60500 SCARNA20.6-201ENST00000517251 106 ntBASIC3.28□□□□□ -1.88
NPHS1O60500 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC3.28□□□□□ -1.88
NPHS1O60500 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC3.28□□□□□ -1.88
NPHS1O60500 U6.106-201ENST00000636360 105 ntBASIC3.28□□□□□ -1.88
NPHS1O60500 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.28□□□□□ -1.88
NPHS1O60500 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
NPHS1O60500 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.28□□□□□ -1.89
NPHS1O60500 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.27□□□□□ -1.89
NPHS1O60500 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
NPHS1O60500 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
NPHS1O60500 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC3.27□□□□□ -1.89
NPHS1O60500 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC3.27□□□□□ -1.89
NPHS1O60500 RNU6-653P-201ENST00000363074 106 ntBASIC3.27□□□□□ -1.89
NPHS1O60500 SNORA67.2-201ENST00000384300 149 ntBASIC3.27□□□□□ -1.89
NPHS1O60500 SNORA19-201ENST00000384737 128 ntBASIC3.27□□□□□ -1.89
NPHS1O60500 AC097463.2-201ENST00000421074 142 ntBASIC3.27□□□□□ -1.89
NPHS1O60500 CST9LP2-201ENST00000437612 320 ntBASIC3.27□□□□□ -1.89
NPHS1O60500 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
NPHS1O60500 AL358232.1-201ENST00000448030 501 ntBASIC3.27□□□□□ -1.89
NPHS1O60500 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.27□□□□□ -1.89
NPHS1O60500 HMGB3P3-201ENST00000510526 400 ntBASIC3.27□□□□□ -1.89
NPHS1O60500 RNU1-143P-201ENST00000516296 146 ntBASIC3.27□□□□□ -1.89
NPHS1O60500 AC026241.1-201ENST00000517873 2142 ntBASIC3.27□□□□□ -1.89
NPHS1O60500 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC3.27□□□□□ -1.89
NPHS1O60500 CARD18-203ENST00000532895 422 ntTSL 2 BASIC3.27□□□□□ -1.89
NPHS1O60500 MRPS18CP4-201ENST00000535821 231 ntBASIC3.27□□□□□ -1.89
NPHS1O60500 MIR3910-1-201ENST00000580936 111 ntBASIC3.27□□□□□ -1.89
NPHS1O60500 U1.23-201ENST00000610293 146 ntBASIC3.27□□□□□ -1.89
NPHS1O60500 RNU1-68P-201ENST00000615382 146 ntBASIC3.27□□□□□ -1.89
NPHS1O60500 U1.39-201ENST00000621562 146 ntBASIC3.27□□□□□ -1.89
NPHS1O60500 GABRG2-229ENST00000641017 3628 ntBASIC3.27□□□□□ -1.89
NPHS1O60500 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
NPHS1O60500 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC3.27□□□□□ -1.89
NPHS1O60500 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC3.26□□□□□ -1.89
NPHS1O60500 RNU1-105P-201ENST00000363470 161 ntBASIC3.26□□□□□ -1.89
NPHS1O60500 Y_RNA.170-201ENST00000363746 110 ntBASIC3.26□□□□□ -1.89
NPHS1O60500 Y_RNA.435-201ENST00000384095 112 ntBASIC3.26□□□□□ -1.89
NPHS1O60500 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
NPHS1O60500 RNU6-1248P-201ENST00000391096 64 ntBASIC3.26□□□□□ -1.89
NPHS1O60500 RNU6ATAC19P-201ENST00000408096 110 ntBASIC3.26□□□□□ -1.89
NPHS1O60500 AL445584.1-201ENST00000431451 330 ntBASIC3.26□□□□□ -1.89
NPHS1O60500 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC3.26□□□□□ -1.89
NPHS1O60500 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC3.26□□□□□ -1.89
NPHS1O60500 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
NPHS1O60500 FCF1P8-201ENST00000510322 597 ntBASIC3.26□□□□□ -1.89
NPHS1O60500 RNA5SP217-201ENST00000515959 91 ntBASIC3.26□□□□□ -1.89
NPHS1O60500 FTO-223ENST00000640179 210 ntTSL 5 BASIC3.26□□□□□ -1.89
NPHS1O60500 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
NPHS1O60500 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.25□□□□□ -1.89
NPHS1O60500 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC3.25□□□□□ -1.89
NPHS1O60500 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
NPHS1O60500 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.25□□□□□ -1.89
NPHS1O60500 AK9-203ENST00000368948 2478 ntTSL 5 BASIC3.25□□□□□ -1.89
NPHS1O60500 MIR148B-201ENST00000362252 99 ntBASIC3.25□□□□□ -1.89
NPHS1O60500 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
NPHS1O60500 MIR1193-201ENST00000408109 78 ntBASIC3.25□□□□□ -1.89
NPHS1O60500 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC3.25□□□□□ -1.89
NPHS1O60500 EIF4EP4-201ENST00000424916 578 ntBASIC3.25□□□□□ -1.89
NPHS1O60500 AC115115.1-201ENST00000449927 248 ntBASIC3.25□□□□□ -1.89
NPHS1O60500 Y_RNA.637-201ENST00000459424 114 ntBASIC3.25□□□□□ -1.89
NPHS1O60500 AC091021.1-201ENST00000468051 388 ntBASIC3.25□□□□□ -1.89
NPHS1O60500 uc_338.1-201ENST00000612113 180 ntBASIC3.25□□□□□ -1.89
NPHS1O60500 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC3.25□□□□□ -1.89
NPHS1O60500 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
NPHS1O60500 AL359854.1-201ENST00000614203 1594 ntBASIC3.25□□□□□ -1.89
NPHS1O60500 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC3.24□□□□□ -1.89
NPHS1O60500 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.24□□□□□ -1.89
NPHS1O60500 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
NPHS1O60500 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
NPHS1O60500 SNORD115-30-201ENST00000364117 82 ntBASIC3.24□□□□□ -1.89
NPHS1O60500 CD24P4-201ENST00000382840 243 ntBASIC3.24□□□□□ -1.89
NPHS1O60500 RNU6-804P-201ENST00000384286 107 ntBASIC3.24□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 165.6 ms