Protein–RNA interactions for Protein: A6NM62

LRRC53, Leucine-rich repeat-containing protein 53, humanhuman

Predictions only

Length 1,247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC53A6NM62 MIR3162-201ENST00000581818 82 ntBASIC2.32□□□□□ -2.04
LRRC53A6NM62 AC005899.2-201ENST00000584353 90 ntBASIC2.32□□□□□ -2.04
LRRC53A6NM62 MIR5701-1-201ENST00000585138 82 ntBASIC2.32□□□□□ -2.04
LRRC53A6NM62 AC084781.2-201ENST00000615568 161 ntBASIC2.32□□□□□ -2.04
LRRC53A6NM62 MIR5701-2-201ENST00000615634 82 ntBASIC2.32□□□□□ -2.04
LRRC53A6NM62 MIR203B-201ENST00000636080 86 ntBASIC2.32□□□□□ -2.04
LRRC53A6NM62 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
LRRC53A6NM62 MTND5P6-201ENST00000422338 1798 ntBASIC2.31□□□□□ -2.04
LRRC53A6NM62 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
LRRC53A6NM62 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.31□□□□□ -2.04
LRRC53A6NM62 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
LRRC53A6NM62 SNORA3A-201ENST00000364113 130 ntBASIC2.31□□□□□ -2.04
LRRC53A6NM62 RNU6-890P-201ENST00000384121 107 ntBASIC2.31□□□□□ -2.04
LRRC53A6NM62 RNU6-17P-201ENST00000384245 107 ntBASIC2.31□□□□□ -2.04
LRRC53A6NM62 RNU6-18P-201ENST00000384527 107 ntBASIC2.31□□□□□ -2.04
LRRC53A6NM62 MIR153-2-201ENST00000385225 87 ntBASIC2.31□□□□□ -2.04
LRRC53A6NM62 SNORA48.3-201ENST00000391081 134 ntBASIC2.31□□□□□ -2.04
LRRC53A6NM62 MTCYBP4-201ENST00000401524 249 ntBASIC2.31□□□□□ -2.04
LRRC53A6NM62 RPL23AP7-203ENST00000449021 469 ntBASIC2.31□□□□□ -2.04
LRRC53A6NM62 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC2.31□□□□□ -2.04
LRRC53A6NM62 PRELID3BP1-201ENST00000457142 540 ntBASIC2.31□□□□□ -2.04
LRRC53A6NM62 RNU6-717P-201ENST00000459076 104 ntBASIC2.31□□□□□ -2.04
LRRC53A6NM62 AC007215.1-201ENST00000464893 276 ntBASIC2.31□□□□□ -2.04
LRRC53A6NM62 AC132942.1-201ENST00000486753 483 ntBASIC2.31□□□□□ -2.04
LRRC53A6NM62 ATP5EP1-201ENST00000510257 156 ntBASIC2.31□□□□□ -2.04
LRRC53A6NM62 Y_RNA.675-201ENST00000516389 149 ntBASIC2.31□□□□□ -2.04
LRRC53A6NM62 SCARNA16.3-201ENST00000516595 184 ntBASIC2.31□□□□□ -2.04
LRRC53A6NM62 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC2.31□□□□□ -2.04
LRRC53A6NM62 AC027288.2-201ENST00000553028 243 ntBASIC2.31□□□□□ -2.04
LRRC53A6NM62 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC2.31□□□□□ -2.04
LRRC53A6NM62 AL355802.3-201ENST00000607571 545 ntBASIC2.31□□□□□ -2.04
LRRC53A6NM62 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
LRRC53A6NM62 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.31□□□□□ -2.04
LRRC53A6NM62 SNORA75.6-201ENST00000391318 127 ntBASIC2.3□□□□□ -2.04
LRRC53A6NM62 RNA5SP338-201ENST00000410495 85 ntBASIC2.3□□□□□ -2.04
LRRC53A6NM62 EDDM3CP-201ENST00000415977 425 ntBASIC2.3□□□□□ -2.04
LRRC53A6NM62 AL445305.1-201ENST00000432577 575 ntBASIC2.3□□□□□ -2.04
LRRC53A6NM62 AL021397.1-201ENST00000451806 248 ntBASIC2.3□□□□□ -2.04
LRRC53A6NM62 SNORD19B-201ENST00000459623 84 ntBASIC2.3□□□□□ -2.04
LRRC53A6NM62 HMGB3P3-201ENST00000510526 400 ntBASIC2.3□□□□□ -2.04
LRRC53A6NM62 RNU6-991P-201ENST00000516168 107 ntBASIC2.3□□□□□ -2.04
LRRC53A6NM62 RNU6-307P-201ENST00000516743 106 ntBASIC2.3□□□□□ -2.04
LRRC53A6NM62 RNU6-58P-201ENST00000517143 103 ntBASIC2.3□□□□□ -2.04
LRRC53A6NM62 MIR3126-201ENST00000577443 74 ntBASIC2.3□□□□□ -2.04
LRRC53A6NM62 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC2.3□□□□□ -2.04
LRRC53A6NM62 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC2.3□□□□□ -2.04
LRRC53A6NM62 AC245884.12-201ENST00000615364 59 ntBASIC2.3□□□□□ -2.04
LRRC53A6NM62 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC2.3□□□□□ -2.04
LRRC53A6NM62 MIR6132-201ENST00000622083 109 ntBASIC2.3□□□□□ -2.04
LRRC53A6NM62 AP000553.5-201ENST00000641933 54 ntBASIC2.3□□□□□ -2.04
LRRC53A6NM62 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC2.3□□□□□ -2.04
LRRC53A6NM62 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
LRRC53A6NM62 ZNF204P-201ENST00000416749 2397 ntBASIC2.3□□□□□ -2.04
LRRC53A6NM62 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.3□□□□□ -2.04
LRRC53A6NM62 RNU4-79P-201ENST00000362764 141 ntBASIC2.29□□□□□ -2.04
LRRC53A6NM62 RNA5SP160-201ENST00000364866 120 ntBASIC2.29□□□□□ -2.04
LRRC53A6NM62 Y_RNA.319-201ENST00000365138 92 ntBASIC2.29□□□□□ -2.04
LRRC53A6NM62 MIR1262-201ENST00000408276 93 ntBASIC2.29□□□□□ -2.04
LRRC53A6NM62 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC2.29□□□□□ -2.04
LRRC53A6NM62 HMGN2P18-201ENST00000450680 270 ntBASIC2.29□□□□□ -2.04
LRRC53A6NM62 MTCO3P8-201ENST00000453691 755 ntBASIC2.29□□□□□ -2.04
LRRC53A6NM62 ELOCP24-201ENST00000456370 334 ntBASIC2.29□□□□□ -2.04
LRRC53A6NM62 AP001486.1-201ENST00000463339 476 ntBASIC2.29□□□□□ -2.04
LRRC53A6NM62 RPL17P19-201ENST00000489069 552 ntBASIC2.29□□□□□ -2.04
LRRC53A6NM62 AC090255.1-201ENST00000495779 349 ntBASIC2.29□□□□□ -2.04
LRRC53A6NM62 AC022493.2-201ENST00000506122 481 ntBASIC2.29□□□□□ -2.04
LRRC53A6NM62 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC2.29□□□□□ -2.04
LRRC53A6NM62 RNU5F-4P-201ENST00000516581 114 ntBASIC2.29□□□□□ -2.04
LRRC53A6NM62 RNU2-44P-201ENST00000516795 194 ntBASIC2.29□□□□□ -2.04
LRRC53A6NM62 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC2.29□□□□□ -2.04
LRRC53A6NM62 C8orf59P2-201ENST00000603441 271 ntBASIC2.29□□□□□ -2.04
LRRC53A6NM62 TEX41-243ENST00000614173 190 ntTSL 5 BASIC2.29□□□□□ -2.04
LRRC53A6NM62 AC005562.2-201ENST00000618264 111 ntBASIC2.29□□□□□ -2.04
LRRC53A6NM62 AL359697.1-201ENST00000624879 587 ntBASIC2.29□□□□□ -2.04
LRRC53A6NM62 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.29□□□□□ -2.04
LRRC53A6NM62 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
LRRC53A6NM62 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.29□□□□□ -2.04
LRRC53A6NM62 RNU6-874P-201ENST00000362390 105 ntBASIC2.28□□□□□ -2.04
LRRC53A6NM62 RNU1-76P-201ENST00000362903 159 ntBASIC2.28□□□□□ -2.04
LRRC53A6NM62 SNORD115-8-201ENST00000363856 82 ntBASIC2.28□□□□□ -2.04
LRRC53A6NM62 SNORD115-38-201ENST00000365037 82 ntBASIC2.28□□□□□ -2.04
LRRC53A6NM62 RNA5SP37-201ENST00000365420 130 ntBASIC2.28□□□□□ -2.04
LRRC53A6NM62 RNU6-541P-201ENST00000384709 110 ntBASIC2.28□□□□□ -2.04
LRRC53A6NM62 MIR23A-201ENST00000385245 73 ntBASIC2.28□□□□□ -2.04
LRRC53A6NM62 RNU6-700P-201ENST00000391043 107 ntBASIC2.28□□□□□ -2.04
LRRC53A6NM62 AC004866.1-201ENST00000411748 78 ntBASIC2.28□□□□□ -2.04
LRRC53A6NM62 MTND3P23-201ENST00000431980 347 ntBASIC2.28□□□□□ -2.04
LRRC53A6NM62 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC2.28□□□□□ -2.04
LRRC53A6NM62 AC004386.2-201ENST00000441858 148 ntBASIC2.28□□□□□ -2.04
LRRC53A6NM62 IFNA11P-201ENST00000446352 526 ntBASIC2.28□□□□□ -2.04
LRRC53A6NM62 AL137159.1-201ENST00000452808 512 ntBASIC2.28□□□□□ -2.04
LRRC53A6NM62 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC2.28□□□□□ -2.04
LRRC53A6NM62 RNU7-14P-201ENST00000459331 62 ntBASIC2.28□□□□□ -2.04
LRRC53A6NM62 AC025033.1-201ENST00000463883 194 ntBASIC2.28□□□□□ -2.04
LRRC53A6NM62 RPS23P5-201ENST00000495419 428 ntBASIC2.28□□□□□ -2.04
LRRC53A6NM62 AC093259.1-201ENST00000509755 300 ntBASIC2.28□□□□□ -2.04
LRRC53A6NM62 Y_RNA.706-201ENST00000516933 99 ntBASIC2.28□□□□□ -2.04
LRRC53A6NM62 RNA5SP490-201ENST00000517141 136 ntBASIC2.28□□□□□ -2.04
LRRC53A6NM62 ANP32BP3-201ENST00000559213 706 ntBASIC2.28□□□□□ -2.04
LRRC53A6NM62 UBL5P4-201ENST00000562584 236 ntBASIC2.28□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 167.2 ms