Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
TMEM88BA6NKF7 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC4.06□□□□□ -1.76
TMEM88BA6NKF7 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
TMEM88BA6NKF7 AP003122.5-201ENST00000527668 3766 ntBASIC4.06□□□□□ -1.76
TMEM88BA6NKF7 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
TMEM88BA6NKF7 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
TMEM88BA6NKF7 RNU6-1305P-201ENST00000364353 104 ntBASIC4.06□□□□□ -1.76
TMEM88BA6NKF7 U3.40-201ENST00000408706 208 ntBASIC4.06□□□□□ -1.76
TMEM88BA6NKF7 AC004866.1-201ENST00000411748 78 ntBASIC4.06□□□□□ -1.76
TMEM88BA6NKF7 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC4.06□□□□□ -1.76
TMEM88BA6NKF7 RPS12P18-201ENST00000442381 270 ntBASIC4.06□□□□□ -1.76
TMEM88BA6NKF7 AC022795.1-201ENST00000473808 480 ntBASIC4.06□□□□□ -1.76
TMEM88BA6NKF7 RPS29P26-201ENST00000477483 171 ntBASIC4.06□□□□□ -1.76
TMEM88BA6NKF7 AC109925.1-201ENST00000478069 331 ntBASIC4.06□□□□□ -1.76
TMEM88BA6NKF7 CKS1BP2-201ENST00000497342 240 ntBASIC4.06□□□□□ -1.76
TMEM88BA6NKF7 RNU6-191P-201ENST00000516295 94 ntBASIC4.06□□□□□ -1.76
TMEM88BA6NKF7 SCARNA3-201ENST00000517097 143 ntBASIC4.06□□□□□ -1.76
TMEM88BA6NKF7 MIR4753-201ENST00000585119 83 ntBASIC4.06□□□□□ -1.76
TMEM88BA6NKF7 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC4.06□□□□□ -1.76
TMEM88BA6NKF7 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC4.06□□□□□ -1.76
TMEM88BA6NKF7 AC002064.3-201ENST00000623448 346 ntBASIC4.06□□□□□ -1.76
TMEM88BA6NKF7 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC4.06□□□□□ -1.76
TMEM88BA6NKF7 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
TMEM88BA6NKF7 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC4.05□□□□□ -1.76
TMEM88BA6NKF7 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC4.05□□□□□ -1.76
TMEM88BA6NKF7 RNA5SP146-201ENST00000410743 123 ntBASIC4.05□□□□□ -1.76
TMEM88BA6NKF7 RNU6-1199P-201ENST00000411249 104 ntBASIC4.05□□□□□ -1.76
TMEM88BA6NKF7 AC126124.2-201ENST00000413542 321 ntBASIC4.05□□□□□ -1.76
TMEM88BA6NKF7 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC4.05□□□□□ -1.76
TMEM88BA6NKF7 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC4.05□□□□□ -1.76
TMEM88BA6NKF7 RNA5SP356-201ENST00000515972 94 ntBASIC4.05□□□□□ -1.76
TMEM88BA6NKF7 RN7SKP40-201ENST00000517211 242 ntBASIC4.05□□□□□ -1.76
TMEM88BA6NKF7 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC4.05□□□□□ -1.76
TMEM88BA6NKF7 DEFB117-201ENST00000602356 141 ntBASIC4.05□□□□□ -1.76
TMEM88BA6NKF7 MIR7515-201ENST00000637837 67 ntBASIC4.05□□□□□ -1.76
TMEM88BA6NKF7 AL356274.2-201ENST00000624379 3752 ntBASIC4.05□□□□□ -1.76
TMEM88BA6NKF7 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC4.05□□□□□ -1.76
TMEM88BA6NKF7 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
TMEM88BA6NKF7 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC4.05□□□□□ -1.76
TMEM88BA6NKF7 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC4.05□□□□□ -1.76
TMEM88BA6NKF7 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC4.04□□□□□ -1.76
TMEM88BA6NKF7 RNU6-662P-201ENST00000384253 104 ntBASIC4.04□□□□□ -1.76
TMEM88BA6NKF7 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC4.04□□□□□ -1.76
TMEM88BA6NKF7 SNORA70.12-201ENST00000516084 153 ntBASIC4.04□□□□□ -1.76
TMEM88BA6NKF7 AP002001.1-203ENST00000534002 267 ntBASIC4.04□□□□□ -1.76
TMEM88BA6NKF7 CBX3P4-201ENST00000538909 354 ntBASIC4.04□□□□□ -1.76
TMEM88BA6NKF7 MIR4644-201ENST00000579929 84 ntBASIC4.04□□□□□ -1.76
TMEM88BA6NKF7 AC069294.1-201ENST00000608397 350 ntBASIC4.04□□□□□ -1.76
TMEM88BA6NKF7 5S_rRNA.12-201ENST00000617631 107 ntBASIC4.04□□□□□ -1.76
TMEM88BA6NKF7 MIR5739-201ENST00000619803 80 ntBASIC4.04□□□□□ -1.76
TMEM88BA6NKF7 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC4.04□□□□□ -1.76
TMEM88BA6NKF7 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
TMEM88BA6NKF7 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC4.03□□□□□ -1.76
TMEM88BA6NKF7 Y_RNA.180-201ENST00000363867 113 ntBASIC4.03□□□□□ -1.76
TMEM88BA6NKF7 Y_RNA.217-201ENST00000364214 105 ntBASIC4.03□□□□□ -1.76
TMEM88BA6NKF7 Y_RNA.329-201ENST00000365209 107 ntBASIC4.03□□□□□ -1.76
TMEM88BA6NKF7 CYP2C59P-201ENST00000457790 269 ntBASIC4.03□□□□□ -1.76
TMEM88BA6NKF7 SNORD2.1-201ENST00000458762 69 ntBASIC4.03□□□□□ -1.76
TMEM88BA6NKF7 RNU7-14P-201ENST00000459331 62 ntBASIC4.03□□□□□ -1.76
TMEM88BA6NKF7 RNU7-120P-201ENST00000459334 63 ntBASIC4.03□□□□□ -1.76
TMEM88BA6NKF7 Y_RNA.641-201ENST00000459414 105 ntBASIC4.03□□□□□ -1.76
TMEM88BA6NKF7 YWHAEP4-201ENST00000505390 198 ntBASIC4.03□□□□□ -1.76
TMEM88BA6NKF7 MIR3145-201ENST00000580727 82 ntBASIC4.03□□□□□ -1.76
TMEM88BA6NKF7 AC105245.1-201ENST00000581934 244 ntBASIC4.03□□□□□ -1.76
TMEM88BA6NKF7 AC005828.6-201ENST00000606610 232 ntBASIC4.03□□□□□ -1.76
TMEM88BA6NKF7 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC4.03□□□□□ -1.76
TMEM88BA6NKF7 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC4.03□□□□□ -1.76
TMEM88BA6NKF7 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
TMEM88BA6NKF7 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
TMEM88BA6NKF7 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC4.03□□□□□ -1.76
TMEM88BA6NKF7 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC4.03□□□□□ -1.77
TMEM88BA6NKF7 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC4.02□□□□□ -1.77
TMEM88BA6NKF7 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC4.02□□□□□ -1.77
TMEM88BA6NKF7 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC4.02□□□□□ -1.77
TMEM88BA6NKF7 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC4.02□□□□□ -1.77
TMEM88BA6NKF7 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
TMEM88BA6NKF7 Y_RNA.262-201ENST00000364641 102 ntBASIC4.02□□□□□ -1.77
TMEM88BA6NKF7 SNORA67.2-201ENST00000384300 149 ntBASIC4.02□□□□□ -1.77
TMEM88BA6NKF7 RNA5SP504-201ENST00000410676 117 ntBASIC4.02□□□□□ -1.77
TMEM88BA6NKF7 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC4.02□□□□□ -1.77
TMEM88BA6NKF7 SNORD116-28-201ENST00000516123 91 ntBASIC4.02□□□□□ -1.77
TMEM88BA6NKF7 RNU6-1098P-201ENST00000516772 96 ntBASIC4.02□□□□□ -1.77
TMEM88BA6NKF7 MIR3199-1-201ENST00000582434 88 ntBASIC4.02□□□□□ -1.77
TMEM88BA6NKF7 MIR4435-1-201ENST00000582552 80 ntBASIC4.02□□□□□ -1.77
TMEM88BA6NKF7 AC072026.1-201ENST00000605023 201 ntBASIC4.02□□□□□ -1.77
TMEM88BA6NKF7 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC4.02□□□□□ -1.77
TMEM88BA6NKF7 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
TMEM88BA6NKF7 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC4.01□□□□□ -1.77
TMEM88BA6NKF7 RNA5SP240-201ENST00000365355 128 ntBASIC4.01□□□□□ -1.77
TMEM88BA6NKF7 RNU6ATAC19P-201ENST00000408096 110 ntBASIC4.01□□□□□ -1.77
TMEM88BA6NKF7 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC4.01□□□□□ -1.77
TMEM88BA6NKF7 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC4.01□□□□□ -1.77
TMEM88BA6NKF7 IGKV1OR9-2-201ENST00000431378 277 ntBASIC4.01□□□□□ -1.77
TMEM88BA6NKF7 PPBPP1-201ENST00000510807 373 ntBASIC4.01□□□□□ -1.77
TMEM88BA6NKF7 RNU6-436P-201ENST00000516171 114 ntBASIC4.01□□□□□ -1.77
TMEM88BA6NKF7 AL137100.2-201ENST00000555786 315 ntBASIC4.01□□□□□ -1.77
TMEM88BA6NKF7 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC4.01□□□□□ -1.77
TMEM88BA6NKF7 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
TMEM88BA6NKF7 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
TMEM88BA6NKF7 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC4□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 222.9 ms