Protein–RNA interactions for Protein: A0A0B4J1U6

TRBV9, T-cell receptor beta variable 9 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV9A0A0B4J1U6 IGHVII-53-1-201ENST00000519538 255 ntBASIC1.09□□□□□ -2.23
TRBV9A0A0B4J1U6 MIR4760-201ENST00000585040 80 ntBASIC1.09□□□□□ -2.23
TRBV9A0A0B4J1U6 AC040896.1-201ENST00000613819 479 ntBASIC1.09□□□□□ -2.23
TRBV9A0A0B4J1U6 AL354950.2-201ENST00000617939 290 ntBASIC1.09□□□□□ -2.23
TRBV9A0A0B4J1U6 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.09□□□□□ -2.24
TRBV9A0A0B4J1U6 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.08□□□□□ -2.24
TRBV9A0A0B4J1U6 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC1.08□□□□□ -2.24
TRBV9A0A0B4J1U6 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC1.08□□□□□ -2.24
TRBV9A0A0B4J1U6 snoU2-30.2-201ENST00000362805 70 ntBASIC1.08□□□□□ -2.24
TRBV9A0A0B4J1U6 SNORA29-201ENST00000384183 140 ntBASIC1.08□□□□□ -2.24
TRBV9A0A0B4J1U6 MIR513A1-201ENST00000385138 129 ntBASIC1.08□□□□□ -2.24
TRBV9A0A0B4J1U6 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC1.08□□□□□ -2.24
TRBV9A0A0B4J1U6 SNORA17.3-201ENST00000391159 129 ntBASIC1.08□□□□□ -2.24
TRBV9A0A0B4J1U6 AC004965.1-201ENST00000413033 213 ntBASIC1.08□□□□□ -2.24
TRBV9A0A0B4J1U6 USP9YP14-201ENST00000430663 563 ntBASIC1.08□□□□□ -2.24
TRBV9A0A0B4J1U6 HMGN2P34-201ENST00000437647 269 ntBASIC1.08□□□□□ -2.24
TRBV9A0A0B4J1U6 AC016717.1-201ENST00000448918 286 ntBASIC1.08□□□□□ -2.24
TRBV9A0A0B4J1U6 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC1.08□□□□□ -2.24
TRBV9A0A0B4J1U6 SRP72-202ENST00000504757 745 ntTSL 2 BASIC1.08□□□□□ -2.24
TRBV9A0A0B4J1U6 CCDC34P1-201ENST00000507441 517 ntBASIC1.08□□□□□ -2.24
TRBV9A0A0B4J1U6 RNU6-189P-201ENST00000516120 101 ntBASIC1.08□□□□□ -2.24
TRBV9A0A0B4J1U6 RNU7-40P-201ENST00000516397 64 ntBASIC1.08□□□□□ -2.24
TRBV9A0A0B4J1U6 AC087854.1-201ENST00000519706 414 ntBASIC1.08□□□□□ -2.24
TRBV9A0A0B4J1U6 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC1.08□□□□□ -2.24
TRBV9A0A0B4J1U6 CYP3A52P-201ENST00000563326 91 ntBASIC1.08□□□□□ -2.24
TRBV9A0A0B4J1U6 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.08□□□□□ -2.24
TRBV9A0A0B4J1U6 Z99497.2-201ENST00000603634 310 ntBASIC1.08□□□□□ -2.24
TRBV9A0A0B4J1U6 AP000907.4-201ENST00000604143 237 ntBASIC1.08□□□□□ -2.24
TRBV9A0A0B4J1U6 AL365434.2-201ENST00000607979 234 ntBASIC1.08□□□□□ -2.24
TRBV9A0A0B4J1U6 TEX41-243ENST00000614173 190 ntTSL 5 BASIC1.08□□□□□ -2.24
TRBV9A0A0B4J1U6 AL353997.5-201ENST00000618886 171 ntBASIC1.08□□□□□ -2.24
TRBV9A0A0B4J1U6 MIR8065-201ENST00000620577 100 ntBASIC1.08□□□□□ -2.24
TRBV9A0A0B4J1U6 AC023510.2-201ENST00000622162 746 ntBASIC1.08□□□□□ -2.24
TRBV9A0A0B4J1U6 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.08□□□□□ -2.24
TRBV9A0A0B4J1U6 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC1.08□□□□□ -2.24
TRBV9A0A0B4J1U6 ZNF209P-201ENST00000593450 2304 ntBASIC1.07□□□□□ -2.24
TRBV9A0A0B4J1U6 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.07□□□□□ -2.24
TRBV9A0A0B4J1U6 SNORA4.2-201ENST00000365313 147 ntBASIC1.07□□□□□ -2.24
TRBV9A0A0B4J1U6 RNU6-968P-201ENST00000384076 107 ntBASIC1.07□□□□□ -2.24
TRBV9A0A0B4J1U6 MIR1253-201ENST00000408273 105 ntBASIC1.07□□□□□ -2.24
TRBV9A0A0B4J1U6 RPS26P42-201ENST00000413485 326 ntBASIC1.07□□□□□ -2.24
TRBV9A0A0B4J1U6 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC1.07□□□□□ -2.24
TRBV9A0A0B4J1U6 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC1.07□□□□□ -2.24
TRBV9A0A0B4J1U6 AC009237.7-201ENST00000447357 229 ntBASIC1.07□□□□□ -2.24
TRBV9A0A0B4J1U6 NFU1P2-201ENST00000448700 469 ntBASIC1.07□□□□□ -2.24
TRBV9A0A0B4J1U6 MTCO2P18-201ENST00000457151 658 ntBASIC1.07□□□□□ -2.24
TRBV9A0A0B4J1U6 RPS29P27-201ENST00000463711 170 ntBASIC1.07□□□□□ -2.24
TRBV9A0A0B4J1U6 AC104576.1-201ENST00000524225 88 ntBASIC1.07□□□□□ -2.24
TRBV9A0A0B4J1U6 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC1.07□□□□□ -2.24
TRBV9A0A0B4J1U6 LRRC34P1-201ENST00000542742 915 ntBASIC1.07□□□□□ -2.24
TRBV9A0A0B4J1U6 AC025423.5-201ENST00000550230 219 ntBASIC1.07□□□□□ -2.24
TRBV9A0A0B4J1U6 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.07□□□□□ -2.24
TRBV9A0A0B4J1U6 AC145350.1-201ENST00000567426 208 ntBASIC1.07□□□□□ -2.24
TRBV9A0A0B4J1U6 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.07□□□□□ -2.24
TRBV9A0A0B4J1U6 AC006001.4-201ENST00000622243 395 ntBASIC1.07□□□□□ -2.24
TRBV9A0A0B4J1U6 MPP6-209ENST00000625307 126 ntTSL 5 BASIC1.07□□□□□ -2.24
TRBV9A0A0B4J1U6 ZNF72P-201ENST00000425869 1908 ntBASIC1.07□□□□□ -2.24
TRBV9A0A0B4J1U6 RNA5SP327-201ENST00000362494 101 ntBASIC1.06□□□□□ -2.24
TRBV9A0A0B4J1U6 Y_RNA.123-201ENST00000363338 102 ntBASIC1.06□□□□□ -2.24
TRBV9A0A0B4J1U6 RNA5SP259-201ENST00000365541 109 ntBASIC1.06□□□□□ -2.24
TRBV9A0A0B4J1U6 RNU6-1286P-201ENST00000383871 107 ntBASIC1.06□□□□□ -2.24
TRBV9A0A0B4J1U6 RNU6-975P-201ENST00000384296 105 ntBASIC1.06□□□□□ -2.24
TRBV9A0A0B4J1U6 MIR194-1-201ENST00000384892 85 ntBASIC1.06□□□□□ -2.24
TRBV9A0A0B4J1U6 MIR549A-201ENST00000385268 96 ntBASIC1.06□□□□□ -2.24
TRBV9A0A0B4J1U6 RNA5SP323-201ENST00000391094 133 ntBASIC1.06□□□□□ -2.24
TRBV9A0A0B4J1U6 MIR320B2-201ENST00000408479 138 ntBASIC1.06□□□□□ -2.24
TRBV9A0A0B4J1U6 RPL37P10-201ENST00000412884 288 ntBASIC1.06□□□□□ -2.24
TRBV9A0A0B4J1U6 MTND2P9-201ENST00000422293 931 ntBASIC1.06□□□□□ -2.24
TRBV9A0A0B4J1U6 AL031667.1-201ENST00000440222 725 ntBASIC1.06□□□□□ -2.24
TRBV9A0A0B4J1U6 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC1.06□□□□□ -2.24
TRBV9A0A0B4J1U6 RPL31P58-201ENST00000469001 379 ntBASIC1.06□□□□□ -2.24
TRBV9A0A0B4J1U6 HMGN1P12-201ENST00000499125 195 ntBASIC1.06□□□□□ -2.24
TRBV9A0A0B4J1U6 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC1.06□□□□□ -2.24
TRBV9A0A0B4J1U6 AL512310.8-201ENST00000550183 120 ntBASIC1.06□□□□□ -2.24
TRBV9A0A0B4J1U6 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC1.06□□□□□ -2.24
TRBV9A0A0B4J1U6 AC104984.5-201ENST00000586878 94 ntBASIC1.06□□□□□ -2.24
TRBV9A0A0B4J1U6 AC073648.5-201ENST00000603502 305 ntBASIC1.06□□□□□ -2.24
TRBV9A0A0B4J1U6 AL512598.1-201ENST00000610158 273 ntBASIC1.06□□□□□ -2.24
TRBV9A0A0B4J1U6 AC073114.1-201ENST00000612027 490 ntBASIC1.06□□□□□ -2.24
TRBV9A0A0B4J1U6 MIR6715A-201ENST00000615929 79 ntBASIC1.06□□□□□ -2.24
TRBV9A0A0B4J1U6 AC068792.1-201ENST00000621354 417 ntBASIC1.06□□□□□ -2.24
TRBV9A0A0B4J1U6 FER-210ENST00000628534 558 ntTSL 5 BASIC1.06□□□□□ -2.24
TRBV9A0A0B4J1U6 AC099654.5-201ENST00000636479 350 ntBASIC1.06□□□□□ -2.24
TRBV9A0A0B4J1U6 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.05□□□□□ -2.24
TRBV9A0A0B4J1U6 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC1.05□□□□□ -2.24
TRBV9A0A0B4J1U6 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.05□□□□□ -2.24
TRBV9A0A0B4J1U6 RNU5B-2P-201ENST00000363036 113 ntBASIC1.05□□□□□ -2.24
TRBV9A0A0B4J1U6 RNU6-1305P-201ENST00000364353 104 ntBASIC1.05□□□□□ -2.24
TRBV9A0A0B4J1U6 RNU6-1317P-201ENST00000364582 104 ntBASIC1.05□□□□□ -2.24
TRBV9A0A0B4J1U6 RNU6-534P-201ENST00000364877 106 ntBASIC1.05□□□□□ -2.24
TRBV9A0A0B4J1U6 MIR618-201ENST00000385287 98 ntBASIC1.05□□□□□ -2.24
TRBV9A0A0B4J1U6 RNU6-482P-201ENST00000391068 107 ntBASIC1.05□□□□□ -2.24
TRBV9A0A0B4J1U6 GYG2-AS1-201ENST00000445107 515 ntTSL 5 BASIC1.05□□□□□ -2.24
TRBV9A0A0B4J1U6 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC1.05□□□□□ -2.24
TRBV9A0A0B4J1U6 TPTE2P5-203ENST00000458118 728 ntBASIC1.05□□□□□ -2.24
TRBV9A0A0B4J1U6 MTCYBP18-201ENST00000501056 747 ntBASIC1.05□□□□□ -2.24
TRBV9A0A0B4J1U6 RN7SKP88-201ENST00000516847 250 ntBASIC1.05□□□□□ -2.24
TRBV9A0A0B4J1U6 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC1.05□□□□□ -2.24
TRBV9A0A0B4J1U6 MIR4524B-201ENST00000581569 115 ntBASIC1.05□□□□□ -2.24
TRBV9A0A0B4J1U6 AC092747.3-201ENST00000603769 301 ntBASIC1.05□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 204 ms