Protein–RNA interactions for Protein: Q9BYR8

KRTAP3-1, Keratin-associated protein 3-1, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-1Q9BYR8 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC2.39□□□□□ -2.03
KRTAP3-1Q9BYR8 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC2.39□□□□□ -2.03
KRTAP3-1Q9BYR8 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
KRTAP3-1Q9BYR8 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC2.38□□□□□ -2.03
KRTAP3-1Q9BYR8 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC2.38□□□□□ -2.03
KRTAP3-1Q9BYR8 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
KRTAP3-1Q9BYR8 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC2.38□□□□□ -2.03
KRTAP3-1Q9BYR8 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
KRTAP3-1Q9BYR8 Y_RNA.37-201ENST00000362606 108 ntBASIC2.38□□□□□ -2.03
KRTAP3-1Q9BYR8 SNORA74A-201ENST00000364089 198 ntBASIC2.38□□□□□ -2.03
KRTAP3-1Q9BYR8 RNU6-743P-201ENST00000364151 106 ntBASIC2.38□□□□□ -2.03
KRTAP3-1Q9BYR8 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
KRTAP3-1Q9BYR8 RNU6-1104P-201ENST00000384723 104 ntBASIC2.38□□□□□ -2.03
KRTAP3-1Q9BYR8 MIR522-201ENST00000385071 87 ntBASIC2.38□□□□□ -2.03
KRTAP3-1Q9BYR8 AL445646.1-201ENST00000431784 216 ntBASIC2.38□□□□□ -2.03
KRTAP3-1Q9BYR8 SNORA71B-202ENST00000439232 272 ntBASIC2.38□□□□□ -2.03
KRTAP3-1Q9BYR8 AL161788.1-201ENST00000441805 169 ntBASIC2.38□□□□□ -2.03
KRTAP3-1Q9BYR8 AC009238.1-201ENST00000442165 424 ntBASIC2.38□□□□□ -2.03
KRTAP3-1Q9BYR8 AC009237.6-201ENST00000446969 424 ntBASIC2.38□□□□□ -2.03
KRTAP3-1Q9BYR8 RPL39P39-201ENST00000455840 151 ntBASIC2.38□□□□□ -2.03
KRTAP3-1Q9BYR8 AP006216.2-201ENST00000457746 333 ntTSL 5 BASIC2.38□□□□□ -2.03
KRTAP3-1Q9BYR8 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC2.38□□□□□ -2.03
KRTAP3-1Q9BYR8 AC093259.1-201ENST00000509755 300 ntBASIC2.38□□□□□ -2.03
KRTAP3-1Q9BYR8 RNU7-6P-201ENST00000516845 62 ntBASIC2.38□□□□□ -2.03
KRTAP3-1Q9BYR8 SNORA18.7-201ENST00000516910 131 ntBASIC2.38□□□□□ -2.03
KRTAP3-1Q9BYR8 RNU7-128P-201ENST00000517247 62 ntBASIC2.38□□□□□ -2.03
KRTAP3-1Q9BYR8 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC2.38□□□□□ -2.03
KRTAP3-1Q9BYR8 AP002004.2-201ENST00000531656 154 ntBASIC2.38□□□□□ -2.03
KRTAP3-1Q9BYR8 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC2.38□□□□□ -2.03
KRTAP3-1Q9BYR8 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
KRTAP3-1Q9BYR8 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC2.38□□□□□ -2.03
KRTAP3-1Q9BYR8 AC022726.1-201ENST00000587475 207 ntBASIC2.38□□□□□ -2.03
KRTAP3-1Q9BYR8 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.38□□□□□ -2.03
KRTAP3-1Q9BYR8 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC2.38□□□□□ -2.03
KRTAP3-1Q9BYR8 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
KRTAP3-1Q9BYR8 FAM35CP-201ENST00000554755 2470 ntBASIC2.37□□□□□ -2.03
KRTAP3-1Q9BYR8 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC2.37□□□□□ -2.03
KRTAP3-1Q9BYR8 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC2.37□□□□□ -2.03
KRTAP3-1Q9BYR8 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
KRTAP3-1Q9BYR8 AC092435.4-201ENST00000623012 4159 ntBASIC2.37□□□□□ -2.03
KRTAP3-1Q9BYR8 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC2.37□□□□□ -2.03
KRTAP3-1Q9BYR8 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
KRTAP3-1Q9BYR8 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC2.37□□□□□ -2.03
KRTAP3-1Q9BYR8 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC2.37□□□□□ -2.03
KRTAP3-1Q9BYR8 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC2.37□□□□□ -2.03
KRTAP3-1Q9BYR8 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
KRTAP3-1Q9BYR8 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC2.37□□□□□ -2.03
KRTAP3-1Q9BYR8 Y_RNA.96-201ENST00000363092 109 ntBASIC2.37□□□□□ -2.03
KRTAP3-1Q9BYR8 RNA5SP242-201ENST00000364171 118 ntBASIC2.37□□□□□ -2.03
KRTAP3-1Q9BYR8 Y_RNA.332-201ENST00000365271 113 ntBASIC2.37□□□□□ -2.03
KRTAP3-1Q9BYR8 SNORA4.2-201ENST00000365313 147 ntBASIC2.37□□□□□ -2.03
KRTAP3-1Q9BYR8 U3.30-201ENST00000391308 210 ntBASIC2.37□□□□□ -2.03
KRTAP3-1Q9BYR8 MIR1255A-201ENST00000408338 113 ntBASIC2.37□□□□□ -2.03
KRTAP3-1Q9BYR8 RNU6ATAC21P-201ENST00000408656 126 ntBASIC2.37□□□□□ -2.03
KRTAP3-1Q9BYR8 RNU6-1077P-201ENST00000410506 102 ntBASIC2.37□□□□□ -2.03
KRTAP3-1Q9BYR8 AC060773.1-201ENST00000421698 310 ntBASIC2.37□□□□□ -2.03
KRTAP3-1Q9BYR8 AC012671.1-201ENST00000451912 203 ntBASIC2.37□□□□□ -2.03
KRTAP3-1Q9BYR8 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC2.37□□□□□ -2.03
KRTAP3-1Q9BYR8 RN7SL222P-201ENST00000476452 299 ntBASIC2.37□□□□□ -2.03
KRTAP3-1Q9BYR8 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC2.37□□□□□ -2.03
KRTAP3-1Q9BYR8 AC072052.1-201ENST00000496556 306 ntBASIC2.37□□□□□ -2.03
KRTAP3-1Q9BYR8 RNU7-61P-201ENST00000515897 61 ntBASIC2.37□□□□□ -2.03
KRTAP3-1Q9BYR8 AC100770.1-201ENST00000532310 322 ntBASIC2.37□□□□□ -2.03
KRTAP3-1Q9BYR8 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC2.37□□□□□ -2.03
KRTAP3-1Q9BYR8 IMMP1LP3-201ENST00000604197 224 ntBASIC2.37□□□□□ -2.03
KRTAP3-1Q9BYR8 SNX18P1Y-201ENST00000616231 511 ntBASIC2.37□□□□□ -2.03
KRTAP3-1Q9BYR8 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC2.37□□□□□ -2.03
KRTAP3-1Q9BYR8 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC2.37□□□□□ -2.03
KRTAP3-1Q9BYR8 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC2.37□□□□□ -2.03
KRTAP3-1Q9BYR8 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC2.37□□□□□ -2.03
KRTAP3-1Q9BYR8 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
KRTAP3-1Q9BYR8 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
KRTAP3-1Q9BYR8 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC2.37□□□□□ -2.03
KRTAP3-1Q9BYR8 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC2.37□□□□□ -2.03
KRTAP3-1Q9BYR8 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
KRTAP3-1Q9BYR8 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC2.37□□□□□ -2.03
KRTAP3-1Q9BYR8 AC008079.2-201ENST00000623543 20396 ntBASIC2.37□□□□□ -2.03
KRTAP3-1Q9BYR8 HAUS3-201ENST00000243706 5620 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
KRTAP3-1Q9BYR8 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
KRTAP3-1Q9BYR8 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC2.37□□□□□ -2.03
KRTAP3-1Q9BYR8 AL133243.3-201ENST00000617415 3004 ntBASIC2.36□□□□□ -2.03
KRTAP3-1Q9BYR8 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
KRTAP3-1Q9BYR8 MAPK10-303ENST00000641324 3959 ntBASIC2.36□□□□□ -2.03
KRTAP3-1Q9BYR8 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC2.36□□□□□ -2.03
KRTAP3-1Q9BYR8 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
KRTAP3-1Q9BYR8 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC2.36□□□□□ -2.03
KRTAP3-1Q9BYR8 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
KRTAP3-1Q9BYR8 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
KRTAP3-1Q9BYR8 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
KRTAP3-1Q9BYR8 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC2.36□□□□□ -2.03
KRTAP3-1Q9BYR8 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
KRTAP3-1Q9BYR8 RNU6-1099P-201ENST00000363533 107 ntBASIC2.36□□□□□ -2.03
KRTAP3-1Q9BYR8 SNORA33-201ENST00000363664 130 ntBASIC2.36□□□□□ -2.03
KRTAP3-1Q9BYR8 RN7SKP160-201ENST00000363804 340 ntBASIC2.36□□□□□ -2.03
KRTAP3-1Q9BYR8 Y_RNA.440-201ENST00000384120 114 ntBASIC2.36□□□□□ -2.03
KRTAP3-1Q9BYR8 RNU1-82P-201ENST00000390851 165 ntBASIC2.36□□□□□ -2.03
KRTAP3-1Q9BYR8 AC096949.1-201ENST00000412047 152 ntBASIC2.36□□□□□ -2.03
KRTAP3-1Q9BYR8 RPS12P18-201ENST00000442381 270 ntBASIC2.36□□□□□ -2.03
KRTAP3-1Q9BYR8 RNU7-94P-201ENST00000459576 63 ntBASIC2.36□□□□□ -2.03
KRTAP3-1Q9BYR8 AL049830.1-201ENST00000468034 425 ntBASIC2.36□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 247.8 ms