Protein–RNA interactions for Protein: Q96NR3

PTCHD1, Patched domain-containing protein 1, humanhuman

Predictions only

Length 888 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD1Q96NR3 Y_RNA.329-201ENST00000365209 107 ntBASIC3.37□□□□□ -1.87
PTCHD1Q96NR3 SNORA18.2-201ENST00000383865 132 ntBASIC3.37□□□□□ -1.87
PTCHD1Q96NR3 RNU1-57P-201ENST00000384491 166 ntBASIC3.37□□□□□ -1.87
PTCHD1Q96NR3 MIR218-2-201ENST00000385006 110 ntBASIC3.37□□□□□ -1.87
PTCHD1Q96NR3 PVALB-202ENST00000404171 422 ntTSL 2 BASIC3.37□□□□□ -1.87
PTCHD1Q96NR3 HMGN2P31-201ENST00000432430 273 ntBASIC3.37□□□□□ -1.87
PTCHD1Q96NR3 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC3.37□□□□□ -1.87
PTCHD1Q96NR3 AC091179.1-201ENST00000461606 579 ntBASIC3.37□□□□□ -1.87
PTCHD1Q96NR3 RPL31P41-201ENST00000477967 372 ntBASIC3.37□□□□□ -1.87
PTCHD1Q96NR3 AL049830.2-201ENST00000480072 201 ntBASIC3.37□□□□□ -1.87
PTCHD1Q96NR3 RNU6-1219P-201ENST00000516143 112 ntBASIC3.37□□□□□ -1.87
PTCHD1Q96NR3 SNORD59.2-201ENST00000516873 68 ntBASIC3.37□□□□□ -1.87
PTCHD1Q96NR3 RNU6-711P-201ENST00000517255 106 ntBASIC3.37□□□□□ -1.87
PTCHD1Q96NR3 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC3.37□□□□□ -1.87
PTCHD1Q96NR3 DEFB131C-201ENST00000528817 165 ntBASIC3.37□□□□□ -1.87
PTCHD1Q96NR3 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC3.37□□□□□ -1.87
PTCHD1Q96NR3 MIR5692C2-201ENST00000577959 77 ntBASIC3.37□□□□□ -1.87
PTCHD1Q96NR3 MIR5006-201ENST00000583027 110 ntBASIC3.37□□□□□ -1.87
PTCHD1Q96NR3 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.37□□□□□ -1.87
PTCHD1Q96NR3 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC3.37□□□□□ -1.87
PTCHD1Q96NR3 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC3.37□□□□□ -1.87
PTCHD1Q96NR3 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC3.37□□□□□ -1.87
PTCHD1Q96NR3 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
PTCHD1Q96NR3 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.37□□□□□ -1.87
PTCHD1Q96NR3 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
PTCHD1Q96NR3 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.36□□□□□ -1.87
PTCHD1Q96NR3 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
PTCHD1Q96NR3 RNU6-324P-201ENST00000363957 106 ntBASIC3.36□□□□□ -1.87
PTCHD1Q96NR3 RNU6-454P-201ENST00000364292 107 ntBASIC3.36□□□□□ -1.87
PTCHD1Q96NR3 MIR449B-201ENST00000384995 97 ntBASIC3.36□□□□□ -1.87
PTCHD1Q96NR3 U3.40-201ENST00000408706 208 ntBASIC3.36□□□□□ -1.87
PTCHD1Q96NR3 BTF3P11-201ENST00000426582 477 ntBASIC3.36□□□□□ -1.87
PTCHD1Q96NR3 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
PTCHD1Q96NR3 AL031183.1-201ENST00000457667 207 ntBASIC3.36□□□□□ -1.87
PTCHD1Q96NR3 RPL36AP48-201ENST00000485521 314 ntBASIC3.36□□□□□ -1.87
PTCHD1Q96NR3 RNU6-436P-201ENST00000516171 114 ntBASIC3.36□□□□□ -1.87
PTCHD1Q96NR3 SNORA70.18-201ENST00000516696 98 ntBASIC3.36□□□□□ -1.87
PTCHD1Q96NR3 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC3.36□□□□□ -1.87
PTCHD1Q96NR3 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC3.36□□□□□ -1.87
PTCHD1Q96NR3 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC3.36□□□□□ -1.87
PTCHD1Q96NR3 AL008718.3-201ENST00000610217 321 ntBASIC3.36□□□□□ -1.87
PTCHD1Q96NR3 MIR7851-201ENST00000610611 160 ntBASIC3.36□□□□□ -1.87
PTCHD1Q96NR3 MIR6075-201ENST00000620782 95 ntBASIC3.36□□□□□ -1.87
PTCHD1Q96NR3 U4.6-201ENST00000621618 127 ntBASIC3.36□□□□□ -1.87
PTCHD1Q96NR3 AP003355.3-201ENST00000623465 114 ntBASIC3.36□□□□□ -1.87
PTCHD1Q96NR3 AC068205.3-201ENST00000636385 468 ntBASIC3.36□□□□□ -1.87
PTCHD1Q96NR3 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
PTCHD1Q96NR3 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.35□□□□□ -1.87
PTCHD1Q96NR3 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.35□□□□□ -1.87
PTCHD1Q96NR3 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.35□□□□□ -1.87
PTCHD1Q96NR3 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
PTCHD1Q96NR3 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.35□□□□□ -1.87
PTCHD1Q96NR3 RNU6-653P-201ENST00000363074 106 ntBASIC3.35□□□□□ -1.87
PTCHD1Q96NR3 5S_rRNA.1-201ENST00000364415 116 ntBASIC3.35□□□□□ -1.87
PTCHD1Q96NR3 RNA5-8SP4-201ENST00000365096 150 ntBASIC3.35□□□□□ -1.87
PTCHD1Q96NR3 RNU6-804P-201ENST00000384286 107 ntBASIC3.35□□□□□ -1.87
PTCHD1Q96NR3 AL357139.1-201ENST00000407792 426 ntBASIC3.35□□□□□ -1.87
PTCHD1Q96NR3 AL365496.1-201ENST00000426885 215 ntBASIC3.35□□□□□ -1.87
PTCHD1Q96NR3 APOA2-205ENST00000468465 421 ntTSL 2 BASIC3.35□□□□□ -1.87
PTCHD1Q96NR3 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC3.35□□□□□ -1.87
PTCHD1Q96NR3 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC3.35□□□□□ -1.87
PTCHD1Q96NR3 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
PTCHD1Q96NR3 RNU1-117P-201ENST00000517041 158 ntBASIC3.35□□□□□ -1.87
PTCHD1Q96NR3 AC079598.5-201ENST00000547460 117 ntBASIC3.35□□□□□ -1.87
PTCHD1Q96NR3 MIR3186-201ENST00000577404 85 ntBASIC3.35□□□□□ -1.87
PTCHD1Q96NR3 MIR4444-1-201ENST00000581696 74 ntBASIC3.35□□□□□ -1.87
PTCHD1Q96NR3 MIR4444-2-201ENST00000584390 74 ntBASIC3.35□□□□□ -1.87
PTCHD1Q96NR3 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.35□□□□□ -1.87
PTCHD1Q96NR3 U3.45-201ENST00000607547 219 ntBASIC3.35□□□□□ -1.87
PTCHD1Q96NR3 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC3.35□□□□□ -1.87
PTCHD1Q96NR3 uc_338.14-201ENST00000613162 166 ntBASIC3.35□□□□□ -1.87
PTCHD1Q96NR3 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
PTCHD1Q96NR3 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.35□□□□□ -1.87
PTCHD1Q96NR3 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.35□□□□□ -1.87
PTCHD1Q96NR3 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
PTCHD1Q96NR3 AC069528.2-201ENST00000624849 1991 ntBASIC3.34□□□□□ -1.87
PTCHD1Q96NR3 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC3.34□□□□□ -1.87
PTCHD1Q96NR3 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
PTCHD1Q96NR3 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
PTCHD1Q96NR3 AC026241.1-201ENST00000517873 2142 ntBASIC3.34□□□□□ -1.87
PTCHD1Q96NR3 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC3.34□□□□□ -1.87
PTCHD1Q96NR3 RNU1-75P-201ENST00000347264 129 ntBASIC3.34□□□□□ -1.87
PTCHD1Q96NR3 snoU2_19.1-201ENST00000362361 80 ntBASIC3.34□□□□□ -1.87
PTCHD1Q96NR3 RNY1P5-201ENST00000383890 115 ntBASIC3.34□□□□□ -1.87
PTCHD1Q96NR3 SNORA40.19-201ENST00000390846 128 ntBASIC3.34□□□□□ -1.87
PTCHD1Q96NR3 RNU6ATAC19P-201ENST00000408096 110 ntBASIC3.34□□□□□ -1.87
PTCHD1Q96NR3 RNA5SP504-201ENST00000410676 117 ntBASIC3.34□□□□□ -1.87
PTCHD1Q96NR3 AC006989.1-201ENST00000427212 131 ntBASIC3.34□□□□□ -1.87
PTCHD1Q96NR3 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC3.34□□□□□ -1.87
PTCHD1Q96NR3 RPS29P26-201ENST00000477483 171 ntBASIC3.34□□□□□ -1.87
PTCHD1Q96NR3 AC140059.1-201ENST00000489238 361 ntBASIC3.34□□□□□ -1.87
PTCHD1Q96NR3 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC3.34□□□□□ -1.87
PTCHD1Q96NR3 HMGB3P3-201ENST00000510526 400 ntBASIC3.34□□□□□ -1.87
PTCHD1Q96NR3 RNU6ATAC13P-201ENST00000516152 131 ntBASIC3.34□□□□□ -1.87
PTCHD1Q96NR3 RNU2-44P-201ENST00000516795 194 ntBASIC3.34□□□□□ -1.87
PTCHD1Q96NR3 RNU6-579P-201ENST00000516879 102 ntBASIC3.34□□□□□ -1.87
PTCHD1Q96NR3 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC3.34□□□□□ -1.87
PTCHD1Q96NR3 AC009127.3-201ENST00000570531 403 ntBASIC3.34□□□□□ -1.87
PTCHD1Q96NR3 MIR3144-201ENST00000579460 79 ntBASIC3.34□□□□□ -1.87
PTCHD1Q96NR3 MIR3922-201ENST00000585192 84 ntBASIC3.34□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 168.1 ms