Protein–RNA interactions for Protein: Q96DD0

LRRC39, Leucine-rich repeat-containing protein 39, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC39Q96DD0 RNU6-113P-201ENST00000516653 101 ntBASIC0.83□□□□□ -2.28
LRRC39Q96DD0 AC026470.2-201ENST00000561492 181 ntBASIC0.83□□□□□ -2.28
LRRC39Q96DD0 AC027807.2-201ENST00000616099 408 ntBASIC0.83□□□□□ -2.28
LRRC39Q96DD0 MIR8070-201ENST00000616510 88 ntBASIC0.83□□□□□ -2.28
LRRC39Q96DD0 AL078595.3-201ENST00000623815 1166 ntBASIC0.83□□□□□ -2.28
LRRC39Q96DD0 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC0.83□□□□□ -2.28
LRRC39Q96DD0 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC0.82□□□□□ -2.28
LRRC39Q96DD0 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC0.82□□□□□ -2.28
LRRC39Q96DD0 SNORA25.9-201ENST00000365087 128 ntBASIC0.82□□□□□ -2.28
LRRC39Q96DD0 Y_RNA.367-201ENST00000365544 101 ntBASIC0.82□□□□□ -2.28
LRRC39Q96DD0 SNORA18.2-201ENST00000383865 132 ntBASIC0.82□□□□□ -2.28
LRRC39Q96DD0 HSFY7P-201ENST00000432672 318 ntBASIC0.82□□□□□ -2.28
LRRC39Q96DD0 HSFY8P-201ENST00000437934 318 ntBASIC0.82□□□□□ -2.28
LRRC39Q96DD0 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC0.82□□□□□ -2.28
LRRC39Q96DD0 EPS15P1-201ENST00000448836 336 ntBASIC0.82□□□□□ -2.28
LRRC39Q96DD0 SRP72-202ENST00000504757 745 ntTSL 2 BASIC0.82□□□□□ -2.28
LRRC39Q96DD0 AC103851.1-201ENST00000506833 274 ntBASIC0.82□□□□□ -2.28
LRRC39Q96DD0 AC008015.1-201ENST00000555505 465 ntBASIC0.82□□□□□ -2.28
LRRC39Q96DD0 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC0.82□□□□□ -2.28
LRRC39Q96DD0 MIR4742-201ENST00000581069 85 ntBASIC0.82□□□□□ -2.28
LRRC39Q96DD0 AC008751.2-201ENST00000597885 980 ntBASIC0.82□□□□□ -2.28
LRRC39Q96DD0 TUSC7.1-201ENST00000610969 165 ntBASIC0.82□□□□□ -2.28
LRRC39Q96DD0 RNU6-1097P-201ENST00000363586 107 ntBASIC0.81□□□□□ -2.28
LRRC39Q96DD0 RNU6-1303P-201ENST00000364841 107 ntBASIC0.81□□□□□ -2.28
LRRC39Q96DD0 SNORD114-24-201ENST00000365029 72 ntBASIC0.81□□□□□ -2.28
LRRC39Q96DD0 RNU6-393P-201ENST00000384475 107 ntBASIC0.81□□□□□ -2.28
LRRC39Q96DD0 MIR146A-201ENST00000385201 99 ntBASIC0.81□□□□□ -2.28
LRRC39Q96DD0 RNU11-5P-201ENST00000391216 129 ntBASIC0.81□□□□□ -2.28
LRRC39Q96DD0 AL356583.2-201ENST00000426536 280 ntBASIC0.81□□□□□ -2.28
LRRC39Q96DD0 RAB28P5-201ENST00000427490 651 ntBASIC0.81□□□□□ -2.28
LRRC39Q96DD0 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC0.81□□□□□ -2.28
LRRC39Q96DD0 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC0.81□□□□□ -2.28
LRRC39Q96DD0 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC0.81□□□□□ -2.28
LRRC39Q96DD0 AC074290.1-201ENST00000448883 135 ntBASIC0.81□□□□□ -2.28
LRRC39Q96DD0 AL009048.1-201ENST00000450437 298 ntBASIC0.81□□□□□ -2.28
LRRC39Q96DD0 MTCO2P6-201ENST00000463134 685 ntBASIC0.81□□□□□ -2.28
LRRC39Q96DD0 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC0.81□□□□□ -2.28
LRRC39Q96DD0 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC0.81□□□□□ -2.28
LRRC39Q96DD0 SNORD27.1-201ENST00000516319 72 ntBASIC0.81□□□□□ -2.28
LRRC39Q96DD0 Y_RNA.676-201ENST00000516393 96 ntBASIC0.81□□□□□ -2.28
LRRC39Q96DD0 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC0.81□□□□□ -2.28
LRRC39Q96DD0 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC0.81□□□□□ -2.28
LRRC39Q96DD0 MTCO3P23-201ENST00000561363 289 ntBASIC0.81□□□□□ -2.28
LRRC39Q96DD0 MIR4775-201ENST00000581168 75 ntBASIC0.81□□□□□ -2.28
LRRC39Q96DD0 MIR3682-201ENST00000581338 84 ntBASIC0.81□□□□□ -2.28
LRRC39Q96DD0 AL133173.2-201ENST00000614270 90 ntBASIC0.81□□□□□ -2.28
LRRC39Q96DD0 AC009509.4-201ENST00000619202 509 ntBASIC0.81□□□□□ -2.28
LRRC39Q96DD0 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC0.81□□□□□ -2.28
LRRC39Q96DD0 SEPT14P19-203ENST00000633205 211 ntBASIC0.81□□□□□ -2.28
LRRC39Q96DD0 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC0.81□□□□□ -2.28
LRRC39Q96DD0 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.81□□□□□ -2.28
LRRC39Q96DD0 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.81□□□□□ -2.28
LRRC39Q96DD0 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC0.81□□□□□ -2.28
LRRC39Q96DD0 HSBP1P2-201ENST00000299671 229 ntBASIC0.8□□□□□ -2.28
LRRC39Q96DD0 RNU4-79P-201ENST00000362764 141 ntBASIC0.8□□□□□ -2.28
LRRC39Q96DD0 MIR200A-201ENST00000384875 90 ntBASIC0.8□□□□□ -2.28
LRRC39Q96DD0 MIR513B-201ENST00000385136 84 ntBASIC0.8□□□□□ -2.28
LRRC39Q96DD0 MIR100-201ENST00000385259 80 ntBASIC0.8□□□□□ -2.28
LRRC39Q96DD0 RNU6-910P-201ENST00000390844 107 ntBASIC0.8□□□□□ -2.28
LRRC39Q96DD0 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC0.8□□□□□ -2.28
LRRC39Q96DD0 Y_RNA.598-201ENST00000410480 95 ntBASIC0.8□□□□□ -2.28
LRRC39Q96DD0 AC006461.1-201ENST00000412637 326 ntBASIC0.8□□□□□ -2.28
LRRC39Q96DD0 AC090960.1-201ENST00000421072 306 ntBASIC0.8□□□□□ -2.28
LRRC39Q96DD0 AC063976.4-201ENST00000421971 163 ntBASIC0.8□□□□□ -2.28
LRRC39Q96DD0 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC0.8□□□□□ -2.28
LRRC39Q96DD0 AL356475.1-201ENST00000440321 341 ntTSL 5 BASIC0.8□□□□□ -2.28
LRRC39Q96DD0 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC0.8□□□□□ -2.28
LRRC39Q96DD0 TAF9P1-201ENST00000445421 515 ntBASIC0.8□□□□□ -2.28
LRRC39Q96DD0 RPS4XP11-201ENST00000446897 772 ntBASIC0.8□□□□□ -2.28
LRRC39Q96DD0 TAF9P2-201ENST00000454958 515 ntBASIC0.8□□□□□ -2.28
LRRC39Q96DD0 AC010486.2-201ENST00000505572 483 ntBASIC0.8□□□□□ -2.28
LRRC39Q96DD0 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC0.8□□□□□ -2.28
LRRC39Q96DD0 PDCD5P2-201ENST00000507570 312 ntBASIC0.8□□□□□ -2.28
LRRC39Q96DD0 SNORA31.2-201ENST00000516019 134 ntBASIC0.8□□□□□ -2.28
LRRC39Q96DD0 RNU6-311P-201ENST00000516224 102 ntBASIC0.8□□□□□ -2.28
LRRC39Q96DD0 RNU6-1220P-201ENST00000517126 108 ntBASIC0.8□□□□□ -2.28
LRRC39Q96DD0 AC069113.1-201ENST00000517763 267 ntBASIC0.8□□□□□ -2.28
LRRC39Q96DD0 MTND1P8-201ENST00000571424 950 ntBASIC0.8□□□□□ -2.28
LRRC39Q96DD0 AL513534.2-201ENST00000603836 250 ntBASIC0.8□□□□□ -2.28
LRRC39Q96DD0 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC0.79□□□□□ -2.28
LRRC39Q96DD0 RNU6-108P-201ENST00000365558 107 ntBASIC0.79□□□□□ -2.28
LRRC39Q96DD0 RNU6-975P-201ENST00000384296 105 ntBASIC0.79□□□□□ -2.28
LRRC39Q96DD0 RNU6ATAC3P-201ENST00000387974 126 ntBASIC0.79□□□□□ -2.28
LRRC39Q96DD0 MIR1276-201ENST00000408707 83 ntBASIC0.79□□□□□ -2.28
LRRC39Q96DD0 RNU6-1054P-201ENST00000411293 104 ntBASIC0.79□□□□□ -2.28
LRRC39Q96DD0 GPR143P-201ENST00000434155 205 ntBASIC0.79□□□□□ -2.28
LRRC39Q96DD0 AL031274.1-201ENST00000450334 232 ntBASIC0.79□□□□□ -2.28
LRRC39Q96DD0 AL133217.1-201ENST00000450980 425 ntBASIC0.79□□□□□ -2.28
LRRC39Q96DD0 SNORD124-201ENST00000459577 104 ntBASIC0.79□□□□□ -2.28
LRRC39Q96DD0 RAP1BP2-201ENST00000478270 544 ntBASIC0.79□□□□□ -2.28
LRRC39Q96DD0 MTND2P14-201ENST00000482139 351 ntBASIC0.79□□□□□ -2.28
LRRC39Q96DD0 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC0.79□□□□□ -2.28
LRRC39Q96DD0 RNU6-197P-201ENST00000516680 100 ntBASIC0.79□□□□□ -2.28
LRRC39Q96DD0 SNORA25.17-201ENST00000517184 124 ntBASIC0.79□□□□□ -2.28
LRRC39Q96DD0 CBX3P8-201ENST00000532412 525 ntBASIC0.79□□□□□ -2.28
LRRC39Q96DD0 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC0.79□□□□□ -2.28
LRRC39Q96DD0 AC021506.2-201ENST00000612354 169 ntBASIC0.79□□□□□ -2.28
LRRC39Q96DD0 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC0.79□□□□□ -2.28
LRRC39Q96DD0 SNORA43.4-201ENST00000629559 138 ntBASIC0.79□□□□□ -2.28
LRRC39Q96DD0 OR4G1P-203ENST00000641984 1631 ntBASIC0.78□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 218.6 ms