Protein–RNA interactions for Protein: P08254

MMP3, Stromelysin-1, humanhuman

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP3P08254 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.58□□□□□ -2
MMP3P08254 Y_RNA.112-201ENST00000363250 102 ntBASIC2.58□□□□□ -2
MMP3P08254 RNY1P14-201ENST00000384426 108 ntBASIC2.58□□□□□ -2
MMP3P08254 RN7SKP61-201ENST00000410642 295 ntBASIC2.58□□□□□ -2
MMP3P08254 AC018865.2-201ENST00000423631 129 ntBASIC2.58□□□□□ -2
MMP3P08254 AL445305.1-201ENST00000432577 575 ntBASIC2.58□□□□□ -2
MMP3P08254 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC2.58□□□□□ -2
MMP3P08254 AL035666.1-201ENST00000446195 348 ntBASIC2.58□□□□□ -2
MMP3P08254 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC2.58□□□□□ -2
MMP3P08254 AC087477.1-201ENST00000465747 340 ntBASIC2.58□□□□□ -2
MMP3P08254 AC016632.1-201ENST00000503994 196 ntBASIC2.58□□□□□ -2
MMP3P08254 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC2.58□□□□□ -2
MMP3P08254 RNU5F-2P-201ENST00000516066 82 ntBASIC2.58□□□□□ -2
MMP3P08254 RNA5SP76-201ENST00000516277 87 ntBASIC2.58□□□□□ -2
MMP3P08254 AL590705.4-201ENST00000532209 134 ntBASIC2.58□□□□□ -2
MMP3P08254 AC079598.5-201ENST00000547460 117 ntBASIC2.58□□□□□ -2
MMP3P08254 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC2.58□□□□□ -2
MMP3P08254 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC2.58□□□□□ -2
MMP3P08254 AC016925.2-201ENST00000605108 242 ntBASIC2.58□□□□□ -2
MMP3P08254 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.58□□□□□ -2
MMP3P08254 RNU6-91P-201ENST00000607774 107 ntBASIC2.58□□□□□ -2
MMP3P08254 MIR6873-201ENST00000622788 63 ntBASIC2.58□□□□□ -2
MMP3P08254 SNORD98-201ENST00000636377 67 ntBASIC2.58□□□□□ -2
MMP3P08254 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
MMP3P08254 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC2.58□□□□□ -2
MMP3P08254 AC002543.1-201ENST00000299783 1954 ntBASIC2.58□□□□□ -2
MMP3P08254 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC2.57□□□□□ -2
MMP3P08254 RNU6-1010P-201ENST00000362757 107 ntBASIC2.57□□□□□ -2
MMP3P08254 Y_RNA.80-201ENST00000362996 102 ntBASIC2.57□□□□□ -2
MMP3P08254 RNU6-1083P-201ENST00000384022 107 ntBASIC2.57□□□□□ -2
MMP3P08254 Y_RNA.428-201ENST00000384078 102 ntBASIC2.57□□□□□ -2
MMP3P08254 Y_RNA.485-201ENST00000384395 102 ntBASIC2.57□□□□□ -2
MMP3P08254 MIR549A-201ENST00000385268 96 ntBASIC2.57□□□□□ -2
MMP3P08254 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.57□□□□□ -2
MMP3P08254 AL079342.1-201ENST00000401460 267 ntBASIC2.57□□□□□ -2
MMP3P08254 RNU6-1156P-201ENST00000410365 100 ntBASIC2.57□□□□□ -2
MMP3P08254 MCFD2P1-201ENST00000417812 300 ntBASIC2.57□□□□□ -2
MMP3P08254 EIF1AXP1-201ENST00000419267 435 ntBASIC2.57□□□□□ -2
MMP3P08254 AC097463.2-201ENST00000421074 142 ntBASIC2.57□□□□□ -2
MMP3P08254 HMGN2P3-201ENST00000433603 273 ntBASIC2.57□□□□□ -2
MMP3P08254 RPS15AP28-201ENST00000435088 386 ntBASIC2.57□□□□□ -2
MMP3P08254 HMGN2P5-201ENST00000436882 273 ntBASIC2.57□□□□□ -2
MMP3P08254 AC018634.1-201ENST00000437554 401 ntBASIC2.57□□□□□ -2
MMP3P08254 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC2.57□□□□□ -2
MMP3P08254 MTND4P19-201ENST00000446659 478 ntBASIC2.57□□□□□ -2
MMP3P08254 CHEK2P4-201ENST00000450340 246 ntBASIC2.57□□□□□ -2
MMP3P08254 AC140059.1-201ENST00000489238 361 ntBASIC2.57□□□□□ -2
MMP3P08254 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.57□□□□□ -2
MMP3P08254 RPPH1-2P-201ENST00000516688 293 ntBASIC2.57□□□□□ -2
MMP3P08254 SNORD116.3-201ENST00000517176 78 ntBASIC2.57□□□□□ -2
MMP3P08254 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC2.57□□□□□ -2
MMP3P08254 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC2.57□□□□□ -2
MMP3P08254 SUB1P3-201ENST00000564581 315 ntBASIC2.57□□□□□ -2
MMP3P08254 AC023043.3-201ENST00000593113 385 ntBASIC2.57□□□□□ -2
MMP3P08254 AC092447.9-201ENST00000603395 144 ntBASIC2.57□□□□□ -2
MMP3P08254 AL355802.3-201ENST00000607571 545 ntBASIC2.57□□□□□ -2
MMP3P08254 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2.57□□□□□ -2
MMP3P08254 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
MMP3P08254 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.56□□□□□ -2
MMP3P08254 snoU2_19.1-201ENST00000362361 80 ntBASIC2.56□□□□□ -2
MMP3P08254 RNU6-222P-201ENST00000362438 107 ntBASIC2.56□□□□□ -2
MMP3P08254 Y_RNA.28-201ENST00000362554 111 ntBASIC2.56□□□□□ -2
MMP3P08254 SNORD114-1-201ENST00000362705 72 ntBASIC2.56□□□□□ -2
MMP3P08254 RNU5B-2P-201ENST00000363036 113 ntBASIC2.56□□□□□ -2
MMP3P08254 Y_RNA.252-201ENST00000364556 101 ntBASIC2.56□□□□□ -2
MMP3P08254 RNU1-57P-201ENST00000384491 166 ntBASIC2.56□□□□□ -2
MMP3P08254 MIR32-201ENST00000384965 70 ntBASIC2.56□□□□□ -2
MMP3P08254 SNORA12.2-201ENST00000391040 156 ntBASIC2.56□□□□□ -2
MMP3P08254 RNU6-700P-201ENST00000391043 107 ntBASIC2.56□□□□□ -2
MMP3P08254 AIMP1P2-201ENST00000425294 312 ntBASIC2.56□□□□□ -2
MMP3P08254 AP000705.1-201ENST00000454567 350 ntBASIC2.56□□□□□ -2
MMP3P08254 RNU7-87P-201ENST00000459343 62 ntBASIC2.56□□□□□ -2
MMP3P08254 AL121594.1-201ENST00000475906 575 ntBASIC2.56□□□□□ -2
MMP3P08254 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC2.56□□□□□ -2
MMP3P08254 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC2.56□□□□□ -2
MMP3P08254 RNU2-53P-201ENST00000516257 147 ntBASIC2.56□□□□□ -2
MMP3P08254 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC2.56□□□□□ -2
MMP3P08254 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC2.56□□□□□ -2
MMP3P08254 MIR3199-1-201ENST00000582434 88 ntBASIC2.56□□□□□ -2
MMP3P08254 Z98751.3-201ENST00000604447 521 ntBASIC2.56□□□□□ -2
MMP3P08254 Y_RNA.812-201ENST00000610788 101 ntBASIC2.56□□□□□ -2
MMP3P08254 Y_RNA.784-201ENST00000613803 101 ntBASIC2.56□□□□□ -2
MMP3P08254 Y_RNA.787-201ENST00000616522 101 ntBASIC2.56□□□□□ -2
MMP3P08254 Y_RNA.780-201ENST00000617336 101 ntBASIC2.56□□□□□ -2
MMP3P08254 Y_RNA.801-201ENST00000619005 101 ntBASIC2.56□□□□□ -2
MMP3P08254 SCARNA4-201ENST00000629045 128 ntBASIC2.56□□□□□ -2
MMP3P08254 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC2.56□□□□□ -2
MMP3P08254 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC2.55□□□□□ -2
MMP3P08254 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
MMP3P08254 RNU6-655P-201ENST00000362858 107 ntBASIC2.55□□□□□ -2
MMP3P08254 RNU6-142P-201ENST00000384019 107 ntBASIC2.55□□□□□ -2
MMP3P08254 Y_RNA.577-201ENST00000384794 101 ntBASIC2.55□□□□□ -2
MMP3P08254 RNU6-482P-201ENST00000391068 107 ntBASIC2.55□□□□□ -2
MMP3P08254 AL590004.1-201ENST00000405321 300 ntBASIC2.55□□□□□ -2
MMP3P08254 EIF4EP4-201ENST00000424916 578 ntBASIC2.55□□□□□ -2
MMP3P08254 RPL30P4-201ENST00000429309 333 ntBASIC2.55□□□□□ -2
MMP3P08254 OR2AQ1P-201ENST00000451972 200 ntBASIC2.55□□□□□ -2
MMP3P08254 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC2.55□□□□□ -2
MMP3P08254 AL353752.1-201ENST00000454946 260 ntBASIC2.55□□□□□ -2
MMP3P08254 AC073901.1-201ENST00000462471 408 ntBASIC2.55□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 376.6 ms