Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 AP005660.1-201ENST00000522972 293 ntBASIC4.12□□□□□ -1.75
TMEM88BA6NKF7 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC4.12□□□□□ -1.75
TMEM88BA6NKF7 MIR4643-201ENST00000577473 78 ntBASIC4.12□□□□□ -1.75
TMEM88BA6NKF7 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC4.12□□□□□ -1.75
TMEM88BA6NKF7 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
TMEM88BA6NKF7 Y_RNA.122-201ENST00000363331 96 ntBASIC4.11□□□□□ -1.75
TMEM88BA6NKF7 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
TMEM88BA6NKF7 RNU6-1289P-201ENST00000384431 106 ntBASIC4.11□□□□□ -1.75
TMEM88BA6NKF7 AC069285.2-201ENST00000440210 275 ntBASIC4.11□□□□□ -1.75
TMEM88BA6NKF7 Y_RNA.638-201ENST00000459374 113 ntBASIC4.11□□□□□ -1.75
TMEM88BA6NKF7 SCARNA17.1-201ENST00000516211 143 ntBASIC4.11□□□□□ -1.75
TMEM88BA6NKF7 SCARNA17.2-201ENST00000516334 143 ntBASIC4.11□□□□□ -1.75
TMEM88BA6NKF7 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
TMEM88BA6NKF7 AC090877.1-201ENST00000561418 344 ntBASIC4.11□□□□□ -1.75
TMEM88BA6NKF7 AC055872.1-201ENST00000570978 278 ntBASIC4.11□□□□□ -1.75
TMEM88BA6NKF7 MIR3684-201ENST00000579779 74 ntBASIC4.11□□□□□ -1.75
TMEM88BA6NKF7 MIR3162-201ENST00000581818 82 ntBASIC4.11□□□□□ -1.75
TMEM88BA6NKF7 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC4.11□□□□□ -1.75
TMEM88BA6NKF7 5S_rRNA.16-201ENST00000612928 119 ntBASIC4.11□□□□□ -1.75
TMEM88BA6NKF7 SCARNA17.4-201ENST00000614296 143 ntBASIC4.11□□□□□ -1.75
TMEM88BA6NKF7 AC073349.3-201ENST00000617616 186 ntBASIC4.11□□□□□ -1.75
TMEM88BA6NKF7 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
TMEM88BA6NKF7 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
TMEM88BA6NKF7 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
TMEM88BA6NKF7 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
TMEM88BA6NKF7 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
TMEM88BA6NKF7 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
TMEM88BA6NKF7 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC4.1□□□□□ -1.75
TMEM88BA6NKF7 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC4.1□□□□□ -1.75
TMEM88BA6NKF7 Y_RNA.597-201ENST00000410463 100 ntBASIC4.1□□□□□ -1.75
TMEM88BA6NKF7 AC114982.1-201ENST00000469402 321 ntBASIC4.1□□□□□ -1.75
TMEM88BA6NKF7 FCF1P8-201ENST00000510322 597 ntBASIC4.1□□□□□ -1.75
TMEM88BA6NKF7 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC4.1□□□□□ -1.75
TMEM88BA6NKF7 AC008873.1-201ENST00000625051 138 ntBASIC4.1□□□□□ -1.75
TMEM88BA6NKF7 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC4.1□□□□□ -1.75
TMEM88BA6NKF7 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC4.1□□□□□ -1.75
TMEM88BA6NKF7 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC4.1□□□□□ -1.75
TMEM88BA6NKF7 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
TMEM88BA6NKF7 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
TMEM88BA6NKF7 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC4.1□□□□□ -1.75
TMEM88BA6NKF7 SCN1A-220ENST00000641603 12506 ntBASIC4.09□□□□□ -1.75
TMEM88BA6NKF7 Y_RNA.76-201ENST00000362931 109 ntBASIC4.09□□□□□ -1.75
TMEM88BA6NKF7 SNORD32B-201ENST00000364460 84 ntBASIC4.09□□□□□ -1.75
TMEM88BA6NKF7 MIR586-201ENST00000385035 97 ntBASIC4.09□□□□□ -1.75
TMEM88BA6NKF7 SNORA12-201ENST00000391162 147 ntBASIC4.09□□□□□ -1.75
TMEM88BA6NKF7 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
TMEM88BA6NKF7 MIR300-201ENST00000401138 83 ntBASIC4.09□□□□□ -1.75
TMEM88BA6NKF7 RNU6-710P-201ENST00000410424 105 ntBASIC4.09□□□□□ -1.75
TMEM88BA6NKF7 Y_RNA.626-201ENST00000411288 95 ntBASIC4.09□□□□□ -1.75
TMEM88BA6NKF7 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC4.09□□□□□ -1.75
TMEM88BA6NKF7 MICF-203ENST00000432679 129 ntBASIC4.09□□□□□ -1.75
TMEM88BA6NKF7 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC4.09□□□□□ -1.75
TMEM88BA6NKF7 SUMO1P2-201ENST00000452524 304 ntBASIC4.09□□□□□ -1.75
TMEM88BA6NKF7 RPL31P61-201ENST00000496160 376 ntBASIC4.09□□□□□ -1.75
TMEM88BA6NKF7 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC4.09□□□□□ -1.75
TMEM88BA6NKF7 RPL21P9-201ENST00000556149 474 ntBASIC4.09□□□□□ -1.75
TMEM88BA6NKF7 MIR4282-201ENST00000583613 67 ntBASIC4.09□□□□□ -1.75
TMEM88BA6NKF7 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC4.09□□□□□ -1.75
TMEM88BA6NKF7 FTX_2.1-201ENST00000618816 94 ntBASIC4.09□□□□□ -1.75
TMEM88BA6NKF7 AC092628.2-201ENST00000622492 339 ntBASIC4.09□□□□□ -1.75
TMEM88BA6NKF7 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC4.09□□□□□ -1.75
TMEM88BA6NKF7 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC4.09□□□□□ -1.76
TMEM88BA6NKF7 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC4.08□□□□□ -1.76
TMEM88BA6NKF7 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
TMEM88BA6NKF7 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
TMEM88BA6NKF7 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC4.08□□□□□ -1.76
TMEM88BA6NKF7 SNORD87-201ENST00000364849 89 ntBASIC4.08□□□□□ -1.76
TMEM88BA6NKF7 AC025554.1-201ENST00000505641 188 ntBASIC4.08□□□□□ -1.76
TMEM88BA6NKF7 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
TMEM88BA6NKF7 RNU2-12P-201ENST00000517216 168 ntBASIC4.08□□□□□ -1.76
TMEM88BA6NKF7 RNU6-586P-201ENST00000517265 104 ntBASIC4.08□□□□□ -1.76
TMEM88BA6NKF7 DEFB131C-201ENST00000528817 165 ntBASIC4.08□□□□□ -1.76
TMEM88BA6NKF7 AC024405.2-202ENST00000532731 184 ntBASIC4.08□□□□□ -1.76
TMEM88BA6NKF7 AP002392.1-201ENST00000537692 208 ntBASIC4.08□□□□□ -1.76
TMEM88BA6NKF7 CYP4A43P-201ENST00000568156 121 ntBASIC4.08□□□□□ -1.76
TMEM88BA6NKF7 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
TMEM88BA6NKF7 MAPK10-322ENST00000641485 4530 ntBASIC4.08□□□□□ -1.76
TMEM88BA6NKF7 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC4.08□□□□□ -1.76
TMEM88BA6NKF7 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC4.08□□□□□ -1.76
TMEM88BA6NKF7 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC4.07□□□□□ -1.76
TMEM88BA6NKF7 AC110774.1-201ENST00000623567 2018 ntBASIC4.07□□□□□ -1.76
TMEM88BA6NKF7 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC4.07□□□□□ -1.76
TMEM88BA6NKF7 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC4.07□□□□□ -1.76
TMEM88BA6NKF7 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
TMEM88BA6NKF7 RNU4-80P-201ENST00000363200 141 ntBASIC4.07□□□□□ -1.76
TMEM88BA6NKF7 RNU6-1020P-201ENST00000363684 107 ntBASIC4.07□□□□□ -1.76
TMEM88BA6NKF7 RNY4P28-201ENST00000365281 93 ntBASIC4.07□□□□□ -1.76
TMEM88BA6NKF7 RNU6-1062P-201ENST00000383908 107 ntBASIC4.07□□□□□ -1.76
TMEM88BA6NKF7 U6atac.2-201ENST00000408644 118 ntBASIC4.07□□□□□ -1.76
TMEM88BA6NKF7 AL139281.1-201ENST00000422120 335 ntBASIC4.07□□□□□ -1.76
TMEM88BA6NKF7 AL121890.1-201ENST00000435457 205 ntBASIC4.07□□□□□ -1.76
TMEM88BA6NKF7 HLA-N-201ENST00000437516 135 ntBASIC4.07□□□□□ -1.76
TMEM88BA6NKF7 AC104332.1-201ENST00000440471 797 ntBASIC4.07□□□□□ -1.76
TMEM88BA6NKF7 RPS29P12-201ENST00000460178 152 ntBASIC4.07□□□□□ -1.76
TMEM88BA6NKF7 AC083906.5-201ENST00000503722 328 ntBASIC4.07□□□□□ -1.76
TMEM88BA6NKF7 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC4.07□□□□□ -1.76
TMEM88BA6NKF7 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC4.07□□□□□ -1.76
TMEM88BA6NKF7 AC009127.3-201ENST00000570531 403 ntBASIC4.07□□□□□ -1.76
TMEM88BA6NKF7 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC4.07□□□□□ -1.76
TMEM88BA6NKF7 Z82209.1-201ENST00000422141 2135 ntBASIC4.07□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 192.6 ms