Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.31□□□□□ -1.88
SHISA3A0PJX4 AK9-203ENST00000368948 2478 ntTSL 5 BASIC3.31□□□□□ -1.88
SHISA3A0PJX4 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
SHISA3A0PJX4 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
SHISA3A0PJX4 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.3□□□□□ -1.88
SHISA3A0PJX4 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
SHISA3A0PJX4 RNU4-10P-201ENST00000364383 140 ntBASIC3.3□□□□□ -1.88
SHISA3A0PJX4 RNU6-1168P-201ENST00000390831 104 ntBASIC3.3□□□□□ -1.88
SHISA3A0PJX4 RNU6-257P-201ENST00000410238 98 ntBASIC3.3□□□□□ -1.88
SHISA3A0PJX4 SNORA57.3-201ENST00000411095 141 ntBASIC3.3□□□□□ -1.88
SHISA3A0PJX4 AC010618.1-201ENST00000469924 477 ntBASIC3.3□□□□□ -1.88
SHISA3A0PJX4 HMGN2P9-201ENST00000476875 229 ntBASIC3.3□□□□□ -1.88
SHISA3A0PJX4 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC3.3□□□□□ -1.88
SHISA3A0PJX4 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC3.3□□□□□ -1.88
SHISA3A0PJX4 RNU5F-4P-201ENST00000516581 114 ntBASIC3.3□□□□□ -1.88
SHISA3A0PJX4 RNU4ATAC17P-201ENST00000517272 120 ntBASIC3.3□□□□□ -1.88
SHISA3A0PJX4 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC3.3□□□□□ -1.88
SHISA3A0PJX4 MIR3939-201ENST00000582614 106 ntBASIC3.3□□□□□ -1.88
SHISA3A0PJX4 AC114781.5-201ENST00000615297 108 ntBASIC3.3□□□□□ -1.88
SHISA3A0PJX4 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC3.3□□□□□ -1.88
SHISA3A0PJX4 AC068700.1-201ENST00000565862 3754 ntBASIC3.3□□□□□ -1.88
SHISA3A0PJX4 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC3.3□□□□□ -1.88
SHISA3A0PJX4 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC3.3□□□□□ -1.88
SHISA3A0PJX4 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC3.3□□□□□ -1.88
SHISA3A0PJX4 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.29□□□□□ -1.88
SHISA3A0PJX4 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
SHISA3A0PJX4 AC010332.2-201ENST00000613083 1904 ntBASIC3.29□□□□□ -1.88
SHISA3A0PJX4 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
SHISA3A0PJX4 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.29□□□□□ -1.88
SHISA3A0PJX4 AL513302.2-201ENST00000562313 1842 ntBASIC3.29□□□□□ -1.88
SHISA3A0PJX4 Y_RNA.24-201ENST00000362508 103 ntBASIC3.29□□□□□ -1.88
SHISA3A0PJX4 SNORA51.4-201ENST00000364993 124 ntBASIC3.29□□□□□ -1.88
SHISA3A0PJX4 Y_RNA.337-201ENST00000365312 102 ntBASIC3.29□□□□□ -1.88
SHISA3A0PJX4 SNORA40-201ENST00000388090 126 ntBASIC3.29□□□□□ -1.88
SHISA3A0PJX4 MIR300-201ENST00000401138 83 ntBASIC3.29□□□□□ -1.88
SHISA3A0PJX4 RPL30P13-201ENST00000418873 348 ntBASIC3.29□□□□□ -1.88
SHISA3A0PJX4 SRI-210ENST00000490437 570 ntTSL 2 BASIC3.29□□□□□ -1.88
SHISA3A0PJX4 RNA5SP112-201ENST00000515937 99 ntBASIC3.29□□□□□ -1.88
SHISA3A0PJX4 AC022616.8-201ENST00000533569 253 ntBASIC3.29□□□□□ -1.88
SHISA3A0PJX4 MIR4644-201ENST00000579929 84 ntBASIC3.29□□□□□ -1.88
SHISA3A0PJX4 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC3.29□□□□□ -1.88
SHISA3A0PJX4 ARF4P1-201ENST00000605447 541 ntBASIC3.29□□□□□ -1.88
SHISA3A0PJX4 CR392039.5-201ENST00000623201 510 ntBASIC3.29□□□□□ -1.88
SHISA3A0PJX4 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC3.29□□□□□ -1.88
SHISA3A0PJX4 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC3.29□□□□□ -1.88
SHISA3A0PJX4 CEP170P1-201ENST00000502249 4587 ntBASIC3.29□□□□□ -1.88
SHISA3A0PJX4 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.28□□□□□ -1.88
SHISA3A0PJX4 MIR383-201ENST00000362257 73 ntBASIC3.28□□□□□ -1.88
SHISA3A0PJX4 RNU6-1290P-201ENST00000362957 109 ntBASIC3.28□□□□□ -1.88
SHISA3A0PJX4 RNU6-969P-201ENST00000383900 105 ntBASIC3.28□□□□□ -1.88
SHISA3A0PJX4 SNORA70C-201ENST00000384538 135 ntBASIC3.28□□□□□ -1.88
SHISA3A0PJX4 RPS26P8-201ENST00000393490 348 ntBASIC3.28□□□□□ -1.88
SHISA3A0PJX4 MIR513C-201ENST00000401352 84 ntBASIC3.28□□□□□ -1.88
SHISA3A0PJX4 AL691449.1-201ENST00000426570 421 ntBASIC3.28□□□□□ -1.88
SHISA3A0PJX4 Z98742.2-201ENST00000431564 187 ntBASIC3.28□□□□□ -1.88
SHISA3A0PJX4 AC008267.6-201ENST00000441664 139 ntBASIC3.28□□□□□ -1.88
SHISA3A0PJX4 HSPE1P13-201ENST00000451143 297 ntBASIC3.28□□□□□ -1.88
SHISA3A0PJX4 RBMY2UP-201ENST00000453474 324 ntBASIC3.28□□□□□ -1.88
SHISA3A0PJX4 AL031183.1-201ENST00000457667 207 ntBASIC3.28□□□□□ -1.88
SHISA3A0PJX4 AC110768.1-201ENST00000509222 400 ntBASIC3.28□□□□□ -1.88
SHISA3A0PJX4 MIR4724-201ENST00000579485 89 ntBASIC3.28□□□□□ -1.88
SHISA3A0PJX4 AC103810.1-201ENST00000579873 453 ntBASIC3.28□□□□□ -1.88
SHISA3A0PJX4 RPL30P11-203ENST00000598995 310 ntBASIC3.28□□□□□ -1.88
SHISA3A0PJX4 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
SHISA3A0PJX4 ANKRD20A9P-201ENST00000457997 2978 ntBASIC3.28□□□□□ -1.88
SHISA3A0PJX4 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
SHISA3A0PJX4 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
SHISA3A0PJX4 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC3.27□□□□□ -1.89
SHISA3A0PJX4 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC3.27□□□□□ -1.89
SHISA3A0PJX4 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.27□□□□□ -1.89
SHISA3A0PJX4 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC3.27□□□□□ -1.89
SHISA3A0PJX4 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
SHISA3A0PJX4 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
SHISA3A0PJX4 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
SHISA3A0PJX4 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
SHISA3A0PJX4 MIR367-201ENST00000362299 68 ntBASIC3.27□□□□□ -1.89
SHISA3A0PJX4 RNA5SP42-201ENST00000364278 115 ntBASIC3.27□□□□□ -1.89
SHISA3A0PJX4 RNU6-1228P-201ENST00000391014 107 ntBASIC3.27□□□□□ -1.89
SHISA3A0PJX4 MIR873-201ENST00000401120 77 ntBASIC3.27□□□□□ -1.89
SHISA3A0PJX4 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC3.27□□□□□ -1.89
SHISA3A0PJX4 RPS4XP2-201ENST00000458402 793 ntBASIC3.27□□□□□ -1.89
SHISA3A0PJX4 AC114982.1-201ENST00000469402 321 ntBASIC3.27□□□□□ -1.89
SHISA3A0PJX4 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC3.27□□□□□ -1.89
SHISA3A0PJX4 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC3.27□□□□□ -1.89
SHISA3A0PJX4 SNORA31.9-201ENST00000516429 84 ntBASIC3.27□□□□□ -1.89
SHISA3A0PJX4 RNU6-1007P-201ENST00000516586 107 ntBASIC3.27□□□□□ -1.89
SHISA3A0PJX4 RNU6-1098P-201ENST00000516772 96 ntBASIC3.27□□□□□ -1.89
SHISA3A0PJX4 MIR2116-201ENST00000517221 80 ntBASIC3.27□□□□□ -1.89
SHISA3A0PJX4 MRPL49P2-201ENST00000521066 465 ntBASIC3.27□□□□□ -1.89
SHISA3A0PJX4 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC3.27□□□□□ -1.89
SHISA3A0PJX4 SNORA62.6-201ENST00000606322 83 ntBASIC3.27□□□□□ -1.89
SHISA3A0PJX4 AC012531.5-201ENST00000611375 151 ntBASIC3.27□□□□□ -1.89
SHISA3A0PJX4 MIR8059-201ENST00000620427 81 ntBASIC3.27□□□□□ -1.89
SHISA3A0PJX4 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC3.27□□□□□ -1.89
SHISA3A0PJX4 MIR3653-201ENST00000625572 110 ntBASIC3.27□□□□□ -1.89
SHISA3A0PJX4 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC3.27□□□□□ -1.89
SHISA3A0PJX4 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC3.27□□□□□ -1.89
SHISA3A0PJX4 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC3.27□□□□□ -1.89
SHISA3A0PJX4 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
SHISA3A0PJX4 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC3.26□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 174.5 ms