Protein–RNA interactions for Protein: A0A0B4J241

TRAV13-1, T-cell receptor alpha variable 13-1 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV13-1A0A0B4J241 U3.4-201ENST00000363352 213 ntBASIC0.04□□□□□ -2.4
TRAV13-1A0A0B4J241 Y_RNA.164-201ENST00000363709 102 ntBASIC0.04□□□□□ -2.4
TRAV13-1A0A0B4J241 Y_RNA.224-201ENST00000364308 111 ntBASIC0.04□□□□□ -2.4
TRAV13-1A0A0B4J241 SNORD32A-201ENST00000364805 84 ntBASIC0.04□□□□□ -2.4
TRAV13-1A0A0B4J241 RNY1P8-201ENST00000383970 114 ntBASIC0.04□□□□□ -2.4
TRAV13-1A0A0B4J241 RNU6-1067P-201ENST00000384752 107 ntBASIC0.04□□□□□ -2.4
TRAV13-1A0A0B4J241 RNA5SP467-201ENST00000391274 118 ntBASIC0.04□□□□□ -2.4
TRAV13-1A0A0B4J241 MIR1295A-201ENST00000408463 79 ntBASIC0.04□□□□□ -2.4
TRAV13-1A0A0B4J241 RNA5SP193-201ENST00000410353 107 ntBASIC0.04□□□□□ -2.4
TRAV13-1A0A0B4J241 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC0.04□□□□□ -2.4
TRAV13-1A0A0B4J241 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC0.04□□□□□ -2.4
TRAV13-1A0A0B4J241 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC0.04□□□□□ -2.4
TRAV13-1A0A0B4J241 AC105313.1-201ENST00000509121 353 ntBASIC0.04□□□□□ -2.4
TRAV13-1A0A0B4J241 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC0.04□□□□□ -2.4
TRAV13-1A0A0B4J241 RNU6-917P-201ENST00000516294 104 ntBASIC0.04□□□□□ -2.4
TRAV13-1A0A0B4J241 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC0.04□□□□□ -2.4
TRAV13-1A0A0B4J241 AC123904.2-201ENST00000548059 300 ntBASIC0.04□□□□□ -2.4
TRAV13-1A0A0B4J241 MIR4778-201ENST00000577635 80 ntBASIC0.04□□□□□ -2.4
TRAV13-1A0A0B4J241 AL139286.2-201ENST00000606838 396 ntBASIC0.04□□□□□ -2.4
TRAV13-1A0A0B4J241 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC0.04□□□□□ -2.4
TRAV13-1A0A0B4J241 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC0.04□□□□□ -2.4
TRAV13-1A0A0B4J241 AC073343.1-201ENST00000328239 651 ntBASIC0.03□□□□□ -2.4
TRAV13-1A0A0B4J241 RNY4P16-201ENST00000364768 94 ntBASIC0.03□□□□□ -2.4
TRAV13-1A0A0B4J241 RNU6-298P-201ENST00000390888 96 ntBASIC0.03□□□□□ -2.4
TRAV13-1A0A0B4J241 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC0.03□□□□□ -2.4
TRAV13-1A0A0B4J241 RPL23AP50-201ENST00000434149 455 ntBASIC0.03□□□□□ -2.4
TRAV13-1A0A0B4J241 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC0.03□□□□□ -2.4
TRAV13-1A0A0B4J241 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC0.03□□□□□ -2.4
TRAV13-1A0A0B4J241 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC0.03□□□□□ -2.4
TRAV13-1A0A0B4J241 RNU6-948P-201ENST00000516374 107 ntBASIC0.03□□□□□ -2.4
TRAV13-1A0A0B4J241 RNU6-1110P-201ENST00000516462 101 ntBASIC0.03□□□□□ -2.4
TRAV13-1A0A0B4J241 AC087854.1-201ENST00000519706 414 ntBASIC0.03□□□□□ -2.4
TRAV13-1A0A0B4J241 LRRC6P1-201ENST00000532188 885 ntBASIC0.03□□□□□ -2.4
TRAV13-1A0A0B4J241 AP002001.1-203ENST00000534002 267 ntBASIC0.03□□□□□ -2.4
TRAV13-1A0A0B4J241 NTS-203ENST00000551529 801 ntTSL 3 BASIC0.03□□□□□ -2.4
TRAV13-1A0A0B4J241 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC0.03□□□□□ -2.4
TRAV13-1A0A0B4J241 MTND4LP25-201ENST00000570218 163 ntBASIC0.03□□□□□ -2.4
TRAV13-1A0A0B4J241 MIR5692A1-201ENST00000580523 69 ntBASIC0.03□□□□□ -2.4
TRAV13-1A0A0B4J241 MIR4753-201ENST00000585119 83 ntBASIC0.03□□□□□ -2.4
TRAV13-1A0A0B4J241 AP001542.1-201ENST00000591314 200 ntBASIC0.03□□□□□ -2.4
TRAV13-1A0A0B4J241 AL670729.3-201ENST00000602345 574 ntTSL 4 BASIC0.03□□□□□ -2.4
TRAV13-1A0A0B4J241 AC005520.5-201ENST00000613926 164 ntBASIC0.03□□□□□ -2.4
TRAV13-1A0A0B4J241 AL163152.1-201ENST00000642001 374 ntBASIC0.03□□□□□ -2.4
TRAV13-1A0A0B4J241 RNU6-562P-201ENST00000362731 107 ntBASIC0.02□□□□□ -2.41
TRAV13-1A0A0B4J241 RNY4P24-201ENST00000362735 96 ntBASIC0.02□□□□□ -2.41
TRAV13-1A0A0B4J241 RNU6-552P-201ENST00000362869 119 ntBASIC0.02□□□□□ -2.41
TRAV13-1A0A0B4J241 RNU6-723P-201ENST00000383973 107 ntBASIC0.02□□□□□ -2.41
TRAV13-1A0A0B4J241 RNU2-3P-201ENST00000410144 191 ntBASIC0.02□□□□□ -2.41
TRAV13-1A0A0B4J241 AL356583.2-201ENST00000426536 280 ntBASIC0.02□□□□□ -2.41
TRAV13-1A0A0B4J241 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC0.02□□□□□ -2.41
TRAV13-1A0A0B4J241 AL133396.1-201ENST00000432048 687 ntBASIC0.02□□□□□ -2.41
TRAV13-1A0A0B4J241 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC0.02□□□□□ -2.41
TRAV13-1A0A0B4J241 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC0.02□□□□□ -2.41
TRAV13-1A0A0B4J241 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC0.02□□□□□ -2.41
TRAV13-1A0A0B4J241 RNU6-377P-201ENST00000515965 102 ntBASIC0.02□□□□□ -2.41
TRAV13-1A0A0B4J241 RNU6-567P-201ENST00000516746 107 ntBASIC0.02□□□□□ -2.41
TRAV13-1A0A0B4J241 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC0.02□□□□□ -2.41
TRAV13-1A0A0B4J241 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC0.02□□□□□ -2.41
TRAV13-1A0A0B4J241 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC0.02□□□□□ -2.41
TRAV13-1A0A0B4J241 MTND1P15-201ENST00000579262 949 ntBASIC0.02□□□□□ -2.41
TRAV13-1A0A0B4J241 MIR4431-201ENST00000579990 94 ntBASIC0.02□□□□□ -2.41
TRAV13-1A0A0B4J241 AL031775.1-201ENST00000607014 887 ntBASIC0.02□□□□□ -2.41
TRAV13-1A0A0B4J241 AL391903.3-201ENST00000612158 163 ntBASIC0.02□□□□□ -2.41
TRAV13-1A0A0B4J241 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC0.02□□□□□ -2.41
TRAV13-1A0A0B4J241 SATB1-AS1-243ENST00000627546 589 ntTSL 5 BASIC0.02□□□□□ -2.41
TRAV13-1A0A0B4J241 U6.108-201ENST00000637764 58 ntBASIC0.02□□□□□ -2.41
TRAV13-1A0A0B4J241 MIR924-201ENST00000638017 53 ntBASIC0.02□□□□□ -2.41
TRAV13-1A0A0B4J241 Y_RNA.4-201ENST00000362333 112 ntBASIC0.01□□□□□ -2.41
TRAV13-1A0A0B4J241 MIR140-201ENST00000385282 100 ntBASIC0.01□□□□□ -2.41
TRAV13-1A0A0B4J241 RNU6-440P-201ENST00000390882 105 ntBASIC0.01□□□□□ -2.41
TRAV13-1A0A0B4J241 RNA5SP511-201ENST00000410487 115 ntBASIC0.01□□□□□ -2.41
TRAV13-1A0A0B4J241 RNU6-607P-201ENST00000411283 108 ntBASIC0.01□□□□□ -2.41
TRAV13-1A0A0B4J241 MRPS18CP6-201ENST00000423587 223 ntBASIC0.01□□□□□ -2.41
TRAV13-1A0A0B4J241 CALM2P2-201ENST00000428512 440 ntBASIC0.01□□□□□ -2.41
TRAV13-1A0A0B4J241 AC016717.1-201ENST00000448918 286 ntBASIC0.01□□□□□ -2.41
TRAV13-1A0A0B4J241 Y_RNA.638-201ENST00000459374 113 ntBASIC0.01□□□□□ -2.41
TRAV13-1A0A0B4J241 MTND3P25-201ENST00000509243 135 ntBASIC0.01□□□□□ -2.41
TRAV13-1A0A0B4J241 RNU6-1069P-201ENST00000516612 133 ntBASIC0.01□□□□□ -2.41
TRAV13-1A0A0B4J241 AC107934.1-201ENST00000522215 217 ntBASIC0.01□□□□□ -2.41
TRAV13-1A0A0B4J241 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC0.01□□□□□ -2.41
TRAV13-1A0A0B4J241 AC016256.1-201ENST00000547971 354 ntBASIC0.01□□□□□ -2.41
TRAV13-1A0A0B4J241 AC131055.1-201ENST00000584626 316 ntBASIC0.01□□□□□ -2.41
TRAV13-1A0A0B4J241 AC073539.2-201ENST00000597113 165 ntBASIC0.01□□□□□ -2.41
TRAV13-1A0A0B4J241 AC146944.4-201ENST00000602697 718 ntBASIC0.01□□□□□ -2.41
TRAV13-1A0A0B4J241 Z99289.3-201ENST00000605586 594 ntBASIC0.01□□□□□ -2.41
TRAV13-1A0A0B4J241 AC104458.1-201ENST00000608243 463 ntBASIC0.01□□□□□ -2.41
TRAV13-1A0A0B4J241 AP000484.1-201ENST00000620067 1252 ntBASIC0.01□□□□□ -2.41
TRAV13-1A0A0B4J241 AL450472.1-202ENST00000637286 180 ntBASIC0.01□□□□□ -2.41
TRAV13-1A0A0B4J241 ZNF736P9Y-201ENST00000439586 1345 ntBASIC0.01□□□□□ -2.41
TRAV13-1A0A0B4J241 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC0□□□□□ -2.41
TRAV13-1A0A0B4J241 RNU6-336P-201ENST00000364891 107 ntBASIC0□□□□□ -2.41
TRAV13-1A0A0B4J241 SNORA2.2-201ENST00000365473 135 ntBASIC0□□□□□ -2.41
TRAV13-1A0A0B4J241 MIR208B-201ENST00000401172 77 ntBASIC0□□□□□ -2.41
TRAV13-1A0A0B4J241 RNA5SP504-201ENST00000410676 117 ntBASIC0□□□□□ -2.41
TRAV13-1A0A0B4J241 RNU2-70P-201ENST00000410718 179 ntBASIC0□□□□□ -2.41
TRAV13-1A0A0B4J241 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC0□□□□□ -2.41
TRAV13-1A0A0B4J241 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC0□□□□□ -2.41
TRAV13-1A0A0B4J241 AC245047.3-201ENST00000429428 127 ntBASIC0□□□□□ -2.41
TRAV13-1A0A0B4J241 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC0□□□□□ -2.41
TRAV13-1A0A0B4J241 AC016632.1-201ENST00000503994 196 ntBASIC0□□□□□ -2.41
Retrieved 100 of 98,524 protein–RNA pairs in 223.6 ms