Protein–RNA interactions for Protein: Q9Y4P1

ATG4B, Cysteine protease ATG4B, humanhuman

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4BQ9Y4P1 AL136221.1-201ENST00000621449 509 ntBASIC1.85□□□□□ -2.11
ATG4BQ9Y4P1 uc_338.20-201ENST00000621563 178 ntBASIC1.85□□□□□ -2.11
ATG4BQ9Y4P1 AL450472.1-202ENST00000637286 180 ntBASIC1.85□□□□□ -2.11
ATG4BQ9Y4P1 Y_RNA.100-201ENST00000363141 102 ntBASIC1.84□□□□□ -2.11
ATG4BQ9Y4P1 Y_RNA.414-201ENST00000384011 101 ntBASIC1.84□□□□□ -2.11
ATG4BQ9Y4P1 SNORA32.2-201ENST00000384049 122 ntBASIC1.84□□□□□ -2.11
ATG4BQ9Y4P1 RNU6-378P-201ENST00000384324 107 ntBASIC1.84□□□□□ -2.11
ATG4BQ9Y4P1 MIR504-201ENST00000385065 83 ntBASIC1.84□□□□□ -2.11
ATG4BQ9Y4P1 RNU6-192P-201ENST00000391253 100 ntBASIC1.84□□□□□ -2.11
ATG4BQ9Y4P1 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC1.84□□□□□ -2.11
ATG4BQ9Y4P1 MIR1289-2-201ENST00000408360 111 ntBASIC1.84□□□□□ -2.11
ATG4BQ9Y4P1 FCF1P9-201ENST00000412546 282 ntBASIC1.84□□□□□ -2.11
ATG4BQ9Y4P1 AC009161.1-201ENST00000417306 376 ntBASIC1.84□□□□□ -2.11
ATG4BQ9Y4P1 AL590632.1-201ENST00000424289 371 ntBASIC1.84□□□□□ -2.11
ATG4BQ9Y4P1 Z82205.1-201ENST00000428456 297 ntBASIC1.84□□□□□ -2.11
ATG4BQ9Y4P1 USP9YP28-201ENST00000435142 589 ntBASIC1.84□□□□□ -2.11
ATG4BQ9Y4P1 snoU13.6-201ENST00000458785 104 ntBASIC1.84□□□□□ -2.11
ATG4BQ9Y4P1 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC1.84□□□□□ -2.11
ATG4BQ9Y4P1 AC093259.1-201ENST00000509755 300 ntBASIC1.84□□□□□ -2.11
ATG4BQ9Y4P1 AC011352.1-201ENST00000512300 793 ntBASIC1.84□□□□□ -2.11
ATG4BQ9Y4P1 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC1.84□□□□□ -2.11
ATG4BQ9Y4P1 RNU6-256P-201ENST00000516747 97 ntBASIC1.84□□□□□ -2.11
ATG4BQ9Y4P1 AP005639.2-201ENST00000527592 928 ntBASIC1.84□□□□□ -2.11
ATG4BQ9Y4P1 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC1.84□□□□□ -2.11
ATG4BQ9Y4P1 MIR4287-201ENST00000579398 78 ntBASIC1.84□□□□□ -2.11
ATG4BQ9Y4P1 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC1.84□□□□□ -2.11
ATG4BQ9Y4P1 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC1.84□□□□□ -2.11
ATG4BQ9Y4P1 AP000907.4-201ENST00000604143 237 ntBASIC1.84□□□□□ -2.11
ATG4BQ9Y4P1 MIR3976-201ENST00000606807 139 ntBASIC1.84□□□□□ -2.11
ATG4BQ9Y4P1 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.11
ATG4BQ9Y4P1 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC1.84□□□□□ -2.11
ATG4BQ9Y4P1 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC1.84□□□□□ -2.11
ATG4BQ9Y4P1 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC1.84□□□□□ -2.11
ATG4BQ9Y4P1 U1.36-201ENST00000620684 176 ntBASIC1.84□□□□□ -2.11
ATG4BQ9Y4P1 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.84□□□□□ -2.11
ATG4BQ9Y4P1 ZNF702P-202ENST00000434269 1966 ntBASIC1.84□□□□□ -2.11
ATG4BQ9Y4P1 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC1.84□□□□□ -2.12
ATG4BQ9Y4P1 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.84□□□□□ -2.12
ATG4BQ9Y4P1 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC1.83□□□□□ -2.12
ATG4BQ9Y4P1 RNU1-58P-201ENST00000362413 163 ntBASIC1.83□□□□□ -2.12
ATG4BQ9Y4P1 Y_RNA.151-201ENST00000363566 112 ntBASIC1.83□□□□□ -2.12
ATG4BQ9Y4P1 RNU2-20P-201ENST00000410425 191 ntBASIC1.83□□□□□ -2.12
ATG4BQ9Y4P1 AC012306.1-201ENST00000423267 114 ntBASIC1.83□□□□□ -2.12
ATG4BQ9Y4P1 AL513185.2-201ENST00000425543 193 ntBASIC1.83□□□□□ -2.12
ATG4BQ9Y4P1 MTND1P4-201ENST00000435196 415 ntBASIC1.83□□□□□ -2.12
ATG4BQ9Y4P1 TRBVA-201ENST00000498804 316 ntBASIC1.83□□□□□ -2.12
ATG4BQ9Y4P1 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC1.83□□□□□ -2.12
ATG4BQ9Y4P1 MRPS17P9-201ENST00000511924 393 ntBASIC1.83□□□□□ -2.12
ATG4BQ9Y4P1 IGHVII-53-1-201ENST00000519538 255 ntBASIC1.83□□□□□ -2.12
ATG4BQ9Y4P1 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC1.83□□□□□ -2.12
ATG4BQ9Y4P1 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC1.83□□□□□ -2.12
ATG4BQ9Y4P1 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC1.83□□□□□ -2.12
ATG4BQ9Y4P1 CYP4A27P-201ENST00000567218 190 ntBASIC1.83□□□□□ -2.12
ATG4BQ9Y4P1 AC025754.2-201ENST00000606491 432 ntBASIC1.83□□□□□ -2.12
ATG4BQ9Y4P1 AC009318.2-201ENST00000610917 651 ntBASIC1.83□□□□□ -2.12
ATG4BQ9Y4P1 AC005520.5-201ENST00000613926 164 ntBASIC1.83□□□□□ -2.12
ATG4BQ9Y4P1 AC233981.2-201ENST00000611524 1614 ntBASIC1.83□□□□□ -2.12
ATG4BQ9Y4P1 ZNF736P3Y-201ENST00000428264 1465 ntBASIC1.82□□□□□ -2.12
ATG4BQ9Y4P1 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.82□□□□□ -2.12
ATG4BQ9Y4P1 RNU6-562P-201ENST00000362731 107 ntBASIC1.82□□□□□ -2.12
ATG4BQ9Y4P1 U3.9-201ENST00000363823 204 ntBASIC1.82□□□□□ -2.12
ATG4BQ9Y4P1 RNU6-1164P-201ENST00000364428 107 ntBASIC1.82□□□□□ -2.12
ATG4BQ9Y4P1 RNU6-26P-201ENST00000383985 107 ntBASIC1.82□□□□□ -2.12
ATG4BQ9Y4P1 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC1.82□□□□□ -2.12
ATG4BQ9Y4P1 RNA5SP212-201ENST00000391223 107 ntBASIC1.82□□□□□ -2.12
ATG4BQ9Y4P1 EIF1AXP1-201ENST00000419267 435 ntBASIC1.82□□□□□ -2.12
ATG4BQ9Y4P1 EIF4EP2-201ENST00000422816 654 ntBASIC1.82□□□□□ -2.12
ATG4BQ9Y4P1 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC1.82□□□□□ -2.12
ATG4BQ9Y4P1 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC1.82□□□□□ -2.12
ATG4BQ9Y4P1 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC1.82□□□□□ -2.12
ATG4BQ9Y4P1 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC1.82□□□□□ -2.12
ATG4BQ9Y4P1 KRTAP13-6P-201ENST00000508999 371 ntBASIC1.82□□□□□ -2.12
ATG4BQ9Y4P1 RNU6-1314P-201ENST00000517139 104 ntBASIC1.82□□□□□ -2.12
ATG4BQ9Y4P1 AC087441.2-201ENST00000529141 262 ntBASIC1.82□□□□□ -2.12
ATG4BQ9Y4P1 MRPS36P4-201ENST00000534436 298 ntBASIC1.82□□□□□ -2.12
ATG4BQ9Y4P1 MIR3672-201ENST00000584290 82 ntBASIC1.82□□□□□ -2.12
ATG4BQ9Y4P1 MIR3942-201ENST00000585264 109 ntBASIC1.82□□□□□ -2.12
ATG4BQ9Y4P1 AC023043.2-201ENST00000589678 1026 ntBASIC1.82□□□□□ -2.12
ATG4BQ9Y4P1 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC1.82□□□□□ -2.12
ATG4BQ9Y4P1 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC1.82□□□□□ -2.12
ATG4BQ9Y4P1 PCGEM1.1-201ENST00000613431 131 ntBASIC1.82□□□□□ -2.12
ATG4BQ9Y4P1 AL773524.1-201ENST00000614065 229 ntBASIC1.82□□□□□ -2.12
ATG4BQ9Y4P1 AC093913.1-201ENST00000614178 329 ntBASIC1.82□□□□□ -2.12
ATG4BQ9Y4P1 AL138726.1-201ENST00000614873 333 ntBASIC1.82□□□□□ -2.12
ATG4BQ9Y4P1 AC007014.2-201ENST00000615581 479 ntBASIC1.82□□□□□ -2.12
ATG4BQ9Y4P1 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.82□□□□□ -2.12
ATG4BQ9Y4P1 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC1.82□□□□□ -2.12
ATG4BQ9Y4P1 AC009033.1-201ENST00000624279 431 ntBASIC1.82□□□□□ -2.12
ATG4BQ9Y4P1 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.82□□□□□ -2.12
ATG4BQ9Y4P1 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC1.82□□□□□ -2.12
ATG4BQ9Y4P1 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC1.82□□□□□ -2.12
ATG4BQ9Y4P1 AC245060.5-201ENST00000610778 3293 ntBASIC1.81□□□□□ -2.12
ATG4BQ9Y4P1 RNU6-234P-201ENST00000365229 104 ntBASIC1.81□□□□□ -2.12
ATG4BQ9Y4P1 RNU6-968P-201ENST00000384076 107 ntBASIC1.81□□□□□ -2.12
ATG4BQ9Y4P1 RNU6-95P-201ENST00000384697 107 ntBASIC1.81□□□□□ -2.12
ATG4BQ9Y4P1 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC1.81□□□□□ -2.12
ATG4BQ9Y4P1 RNU6-1093P-201ENST00000391194 107 ntBASIC1.81□□□□□ -2.12
ATG4BQ9Y4P1 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC1.81□□□□□ -2.12
ATG4BQ9Y4P1 MIR1277-201ENST00000408536 78 ntBASIC1.81□□□□□ -2.12
ATG4BQ9Y4P1 ZNF885P-201ENST00000420174 1098 ntBASIC1.81□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 196 ms