Protein–RNA interactions for Protein: Q96BQ3

TRIM43, Tripartite motif-containing protein 43, humanhuman

Predicted RBP Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43Q96BQ3 Y_RNA.28-201ENST00000362554 111 ntBASIC2.93□□□□□ -1.94
TRIM43Q96BQ3 Y_RNA.31-201ENST00000362574 102 ntBASIC2.93□□□□□ -1.94
TRIM43Q96BQ3 RNU1-35P-201ENST00000362782 153 ntBASIC2.93□□□□□ -1.94
TRIM43Q96BQ3 RNU1-115P-201ENST00000365329 160 ntBASIC2.93□□□□□ -1.94
TRIM43Q96BQ3 MIR512-1-201ENST00000384913 84 ntBASIC2.93□□□□□ -1.94
TRIM43Q96BQ3 MIR153-2-201ENST00000385225 87 ntBASIC2.93□□□□□ -1.94
TRIM43Q96BQ3 MIR190B-201ENST00000401119 79 ntBASIC2.93□□□□□ -1.94
TRIM43Q96BQ3 RNU6-1328P-201ENST00000410938 106 ntBASIC2.93□□□□□ -1.94
TRIM43Q96BQ3 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC2.93□□□□□ -1.94
TRIM43Q96BQ3 PMCHL1-202ENST00000423102 261 ntBASIC2.93□□□□□ -1.94
TRIM43Q96BQ3 AL590556.1-201ENST00000423231 483 ntBASIC2.93□□□□□ -1.94
TRIM43Q96BQ3 RPL30P4-201ENST00000429309 333 ntBASIC2.93□□□□□ -1.94
TRIM43Q96BQ3 AL591806.2-201ENST00000433122 173 ntBASIC2.93□□□□□ -1.94
TRIM43Q96BQ3 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC2.93□□□□□ -1.94
TRIM43Q96BQ3 RPL21P2-201ENST00000440049 481 ntBASIC2.93□□□□□ -1.94
TRIM43Q96BQ3 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC2.93□□□□□ -1.94
TRIM43Q96BQ3 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC2.93□□□□□ -1.94
TRIM43Q96BQ3 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC2.93□□□□□ -1.94
TRIM43Q96BQ3 snoU13.6-201ENST00000458785 104 ntBASIC2.93□□□□□ -1.94
TRIM43Q96BQ3 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC2.93□□□□□ -1.94
TRIM43Q96BQ3 TOMM22P6-201ENST00000465035 409 ntBASIC2.93□□□□□ -1.94
TRIM43Q96BQ3 AC140059.1-201ENST00000489238 361 ntBASIC2.93□□□□□ -1.94
TRIM43Q96BQ3 AC144568.1-201ENST00000520139 137 ntBASIC2.93□□□□□ -1.94
TRIM43Q96BQ3 CYP4A27P-201ENST00000567218 190 ntBASIC2.93□□□□□ -1.94
TRIM43Q96BQ3 AC010928.2-201ENST00000588017 287 ntBASIC2.93□□□□□ -1.94
TRIM43Q96BQ3 AL078605.1-201ENST00000603529 500 ntBASIC2.93□□□□□ -1.94
TRIM43Q96BQ3 AC025754.2-201ENST00000606491 432 ntBASIC2.93□□□□□ -1.94
TRIM43Q96BQ3 AC006157.1-201ENST00000611750 366 ntBASIC2.93□□□□□ -1.94
TRIM43Q96BQ3 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC2.93□□□□□ -1.94
TRIM43Q96BQ3 MESTIT1_1.1-201ENST00000618871 140 ntBASIC2.93□□□□□ -1.94
TRIM43Q96BQ3 AC099654.10-201ENST00000640395 161 ntBASIC2.93□□□□□ -1.94
TRIM43Q96BQ3 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC2.93□□□□□ -1.94
TRIM43Q96BQ3 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC2.93□□□□□ -1.94
TRIM43Q96BQ3 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC2.93□□□□□ -1.94
TRIM43Q96BQ3 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.93□□□□□ -1.94
TRIM43Q96BQ3 AC008264.2-201ENST00000610193 3731 ntBASIC2.93□□□□□ -1.94
TRIM43Q96BQ3 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
TRIM43Q96BQ3 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC2.92□□□□□ -1.94
TRIM43Q96BQ3 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC2.92□□□□□ -1.94
TRIM43Q96BQ3 Y_RNA.39-201ENST00000362620 98 ntBASIC2.92□□□□□ -1.94
TRIM43Q96BQ3 Y_RNA.132-201ENST00000363421 102 ntBASIC2.92□□□□□ -1.94
TRIM43Q96BQ3 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC2.92□□□□□ -1.94
TRIM43Q96BQ3 Y_RNA.605-201ENST00000410577 105 ntBASIC2.92□□□□□ -1.94
TRIM43Q96BQ3 RNA5SP492-201ENST00000411330 114 ntBASIC2.92□□□□□ -1.94
TRIM43Q96BQ3 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC2.92□□□□□ -1.94
TRIM43Q96BQ3 UBBP3-201ENST00000445497 241 ntBASIC2.92□□□□□ -1.94
TRIM43Q96BQ3 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC2.92□□□□□ -1.94
TRIM43Q96BQ3 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC2.92□□□□□ -1.94
TRIM43Q96BQ3 RNU6-991P-201ENST00000516168 107 ntBASIC2.92□□□□□ -1.94
TRIM43Q96BQ3 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC2.92□□□□□ -1.94
TRIM43Q96BQ3 MIR4648-201ENST00000580107 72 ntBASIC2.92□□□□□ -1.94
TRIM43Q96BQ3 AC092447.9-201ENST00000603395 144 ntBASIC2.92□□□□□ -1.94
TRIM43Q96BQ3 AC069294.1-201ENST00000608397 350 ntBASIC2.92□□□□□ -1.94
TRIM43Q96BQ3 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC2.92□□□□□ -1.94
TRIM43Q96BQ3 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC2.92□□□□□ -1.94
TRIM43Q96BQ3 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC2.92□□□□□ -1.94
TRIM43Q96BQ3 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC2.91□□□□□ -1.94
TRIM43Q96BQ3 AC080128.1-201ENST00000474389 1917 ntBASIC2.91□□□□□ -1.94
TRIM43Q96BQ3 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC2.91□□□□□ -1.94
TRIM43Q96BQ3 RNA5SP383-201ENST00000362934 120 ntBASIC2.91□□□□□ -1.94
TRIM43Q96BQ3 Y_RNA.326-201ENST00000365176 113 ntBASIC2.91□□□□□ -1.94
TRIM43Q96BQ3 SNORA22B-201ENST00000383876 138 ntBASIC2.91□□□□□ -1.94
TRIM43Q96BQ3 MIR208B-201ENST00000401172 77 ntBASIC2.91□□□□□ -1.94
TRIM43Q96BQ3 U6atac.2-201ENST00000408644 118 ntBASIC2.91□□□□□ -1.94
TRIM43Q96BQ3 RNA5SP425-201ENST00000410336 112 ntBASIC2.91□□□□□ -1.94
TRIM43Q96BQ3 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC2.91□□□□□ -1.94
TRIM43Q96BQ3 MCFD2P1-201ENST00000417812 300 ntBASIC2.91□□□□□ -1.94
TRIM43Q96BQ3 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC2.91□□□□□ -1.94
TRIM43Q96BQ3 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC2.91□□□□□ -1.94
TRIM43Q96BQ3 OR2AQ1P-201ENST00000451972 200 ntBASIC2.91□□□□□ -1.94
TRIM43Q96BQ3 GSTA11P-201ENST00000452866 669 ntBASIC2.91□□□□□ -1.94
TRIM43Q96BQ3 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC2.91□□□□□ -1.94
TRIM43Q96BQ3 AC023141.11-201ENST00000508864 202 ntBASIC2.91□□□□□ -1.94
TRIM43Q96BQ3 RNA5SP320-201ENST00000516263 124 ntBASIC2.91□□□□□ -1.94
TRIM43Q96BQ3 AC091144.1-201ENST00000519573 138 ntBASIC2.91□□□□□ -1.94
TRIM43Q96BQ3 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC2.91□□□□□ -1.94
TRIM43Q96BQ3 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC2.91□□□□□ -1.94
TRIM43Q96BQ3 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC2.91□□□□□ -1.94
TRIM43Q96BQ3 AC105245.1-201ENST00000581934 244 ntBASIC2.91□□□□□ -1.94
TRIM43Q96BQ3 AC016925.2-201ENST00000605108 242 ntBASIC2.91□□□□□ -1.94
TRIM43Q96BQ3 AL138963.2-201ENST00000605137 226 ntBASIC2.91□□□□□ -1.94
TRIM43Q96BQ3 AL355802.3-201ENST00000607571 545 ntBASIC2.91□□□□□ -1.94
TRIM43Q96BQ3 AC091925.1-201ENST00000623204 462 ntBASIC2.91□□□□□ -1.94
TRIM43Q96BQ3 AC090517.3-201ENST00000625170 141 ntBASIC2.91□□□□□ -1.94
TRIM43Q96BQ3 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC2.91□□□□□ -1.94
TRIM43Q96BQ3 snoU2_19.1-201ENST00000362361 80 ntBASIC2.9□□□□□ -1.95
TRIM43Q96BQ3 SNORD56.3-201ENST00000363507 71 ntBASIC2.9□□□□□ -1.95
TRIM43Q96BQ3 Y_RNA.216-201ENST00000364205 93 ntBASIC2.9□□□□□ -1.95
TRIM43Q96BQ3 Y_RNA.364-201ENST00000365532 101 ntBASIC2.9□□□□□ -1.95
TRIM43Q96BQ3 AC117470.1-201ENST00000381974 330 ntBASIC2.9□□□□□ -1.95
TRIM43Q96BQ3 RNU6-17P-201ENST00000384245 107 ntBASIC2.9□□□□□ -1.95
TRIM43Q96BQ3 RNY1P14-201ENST00000384426 108 ntBASIC2.9□□□□□ -1.95
TRIM43Q96BQ3 Y_RNA.496-201ENST00000384444 101 ntBASIC2.9□□□□□ -1.95
TRIM43Q96BQ3 RNU6-18P-201ENST00000384527 107 ntBASIC2.9□□□□□ -1.95
TRIM43Q96BQ3 RNU6-541P-201ENST00000384709 110 ntBASIC2.9□□□□□ -1.95
TRIM43Q96BQ3 SNORA69.1-201ENST00000390904 137 ntBASIC2.9□□□□□ -1.95
TRIM43Q96BQ3 FO393413.1-201ENST00000402892 195 ntBASIC2.9□□□□□ -1.95
TRIM43Q96BQ3 RN7SKP223-201ENST00000410582 62 ntBASIC2.9□□□□□ -1.95
TRIM43Q96BQ3 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.9□□□□□ -1.95
TRIM43Q96BQ3 RPS26P42-201ENST00000413485 326 ntBASIC2.9□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 161.6 ms