Protein–RNA interactions for Protein: P01730

CD4, T-cell surface glycoprotein CD4, humanhuman

Predictions only

Length 458 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD4P01730 AL359697.1-201ENST00000624879 587 ntBASIC2.42□□□□□ -2.02
CD4P01730 MIR1248-201ENST00000629190 106 ntBASIC2.42□□□□□ -2.02
CD4P01730 AC100810.6-201ENST00000638068 285 ntBASIC2.42□□□□□ -2.02
CD4P01730 ZNF355P-201ENST00000427301 3216 ntBASIC2.42□□□□□ -2.02
CD4P01730 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
CD4P01730 RNU6-1252P-201ENST00000363054 104 ntBASIC2.41□□□□□ -2.02
CD4P01730 RNU6-743P-201ENST00000364151 106 ntBASIC2.41□□□□□ -2.02
CD4P01730 SNORA12-201ENST00000391162 147 ntBASIC2.41□□□□□ -2.02
CD4P01730 RNA5SP494-201ENST00000410653 129 ntBASIC2.41□□□□□ -2.02
CD4P01730 KRTAP13-6P-201ENST00000508999 371 ntBASIC2.41□□□□□ -2.02
CD4P01730 AC093259.1-201ENST00000509755 300 ntBASIC2.41□□□□□ -2.02
CD4P01730 RNU6-718P-201ENST00000516166 105 ntBASIC2.41□□□□□ -2.02
CD4P01730 Y_RNA.673-201ENST00000516306 88 ntBASIC2.41□□□□□ -2.02
CD4P01730 RNA5SP490-201ENST00000517141 136 ntBASIC2.41□□□□□ -2.02
CD4P01730 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC2.41□□□□□ -2.02
CD4P01730 AC026470.2-201ENST00000561492 181 ntBASIC2.41□□□□□ -2.02
CD4P01730 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
CD4P01730 AC009831.4-201ENST00000620744 325 ntBASIC2.41□□□□□ -2.02
CD4P01730 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
CD4P01730 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.4□□□□□ -2.02
CD4P01730 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC2.4□□□□□ -2.03
CD4P01730 SNORD116-11-201ENST00000383882 92 ntBASIC2.4□□□□□ -2.03
CD4P01730 SNORA29-201ENST00000384183 140 ntBASIC2.4□□□□□ -2.03
CD4P01730 SNORA36A-201ENST00000384221 132 ntBASIC2.4□□□□□ -2.03
CD4P01730 RNU6-95P-201ENST00000384697 107 ntBASIC2.4□□□□□ -2.03
CD4P01730 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC2.4□□□□□ -2.03
CD4P01730 RNU2-2P-201ENST00000410396 191 ntBASIC2.4□□□□□ -2.03
CD4P01730 MTND2P29-201ENST00000438595 412 ntBASIC2.4□□□□□ -2.03
CD4P01730 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC2.4□□□□□ -2.03
CD4P01730 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC2.4□□□□□ -2.03
CD4P01730 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC2.4□□□□□ -2.03
CD4P01730 ACA59.1-201ENST00000515966 143 ntBASIC2.4□□□□□ -2.03
CD4P01730 RNU6-864P-201ENST00000516256 108 ntBASIC2.4□□□□□ -2.03
CD4P01730 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC2.4□□□□□ -2.03
CD4P01730 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC2.4□□□□□ -2.03
CD4P01730 MIR3672-201ENST00000584290 82 ntBASIC2.4□□□□□ -2.03
CD4P01730 POLR3GP2-201ENST00000588366 668 ntBASIC2.4□□□□□ -2.03
CD4P01730 AL022345.1-201ENST00000607292 135 ntBASIC2.4□□□□□ -2.03
CD4P01730 U2.15-201ENST00000611544 191 ntBASIC2.4□□□□□ -2.03
CD4P01730 U2.16-201ENST00000613119 191 ntBASIC2.4□□□□□ -2.03
CD4P01730 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC2.4□□□□□ -2.03
CD4P01730 U2.12-201ENST00000613778 191 ntBASIC2.4□□□□□ -2.03
CD4P01730 U2.20-201ENST00000613956 192 ntBASIC2.4□□□□□ -2.03
CD4P01730 U2.9-201ENST00000615427 191 ntBASIC2.4□□□□□ -2.03
CD4P01730 U2.11-201ENST00000616345 191 ntBASIC2.4□□□□□ -2.03
CD4P01730 U2.2-201ENST00000616535 191 ntBASIC2.4□□□□□ -2.03
CD4P01730 U2.3-201ENST00000617785 191 ntBASIC2.4□□□□□ -2.03
CD4P01730 U2.19-201ENST00000618602 191 ntBASIC2.4□□□□□ -2.03
CD4P01730 RNU2-1-201ENST00000618664 191 ntBASIC2.4□□□□□ -2.03
CD4P01730 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC2.4□□□□□ -2.03
CD4P01730 U2.6-201ENST00000619225 191 ntBASIC2.4□□□□□ -2.03
CD4P01730 U2.5-201ENST00000619465 191 ntBASIC2.4□□□□□ -2.03
CD4P01730 U2.10-201ENST00000620268 191 ntBASIC2.4□□□□□ -2.03
CD4P01730 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC2.4□□□□□ -2.03
CD4P01730 MIR6132-201ENST00000622083 109 ntBASIC2.4□□□□□ -2.03
CD4P01730 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.4□□□□□ -2.03
CD4P01730 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.4□□□□□ -2.03
CD4P01730 RNU5B-2P-201ENST00000363036 113 ntBASIC2.39□□□□□ -2.03
CD4P01730 RNU6-378P-201ENST00000384324 107 ntBASIC2.39□□□□□ -2.03
CD4P01730 RNU6-160P-201ENST00000384591 107 ntBASIC2.39□□□□□ -2.03
CD4P01730 MIR1262-201ENST00000408276 93 ntBASIC2.39□□□□□ -2.03
CD4P01730 Y_RNA.619-201ENST00000410951 90 ntBASIC2.39□□□□□ -2.03
CD4P01730 RNA5SP247-201ENST00000411181 105 ntBASIC2.39□□□□□ -2.03
CD4P01730 CYCSP49-201ENST00000420810 319 ntBASIC2.39□□□□□ -2.03
CD4P01730 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC2.39□□□□□ -2.03
CD4P01730 FGF7P6-202ENST00000451282 293 ntBASIC2.39□□□□□ -2.03
CD4P01730 RNU7-187P-201ENST00000458985 68 ntBASIC2.39□□□□□ -2.03
CD4P01730 AC130509.1-201ENST00000464158 433 ntBASIC2.39□□□□□ -2.03
CD4P01730 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC2.39□□□□□ -2.03
CD4P01730 AP000942.3-201ENST00000603702 160 ntBASIC2.39□□□□□ -2.03
CD4P01730 AC007014.2-201ENST00000615581 479 ntBASIC2.39□□□□□ -2.03
CD4P01730 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC2.39□□□□□ -2.03
CD4P01730 AC080100.1-201ENST00000624239 5356 ntBASIC2.38□□□□□ -2.03
CD4P01730 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
CD4P01730 RNU6-1093P-201ENST00000391194 107 ntBASIC2.38□□□□□ -2.03
CD4P01730 RNU6-510P-201ENST00000391239 108 ntBASIC2.38□□□□□ -2.03
CD4P01730 MIR320B2-201ENST00000408479 138 ntBASIC2.38□□□□□ -2.03
CD4P01730 Y_RNA.599-201ENST00000410489 109 ntBASIC2.38□□□□□ -2.03
CD4P01730 AL139396.1-201ENST00000421137 167 ntBASIC2.38□□□□□ -2.03
CD4P01730 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC2.38□□□□□ -2.03
CD4P01730 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC2.38□□□□□ -2.03
CD4P01730 RNU5F-4P-201ENST00000516581 114 ntBASIC2.38□□□□□ -2.03
CD4P01730 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC2.38□□□□□ -2.03
CD4P01730 PRELID2P1-201ENST00000552837 301 ntBASIC2.38□□□□□ -2.03
CD4P01730 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC2.38□□□□□ -2.03
CD4P01730 AC090517.1-201ENST00000569307 266 ntBASIC2.38□□□□□ -2.03
CD4P01730 AP000907.4-201ENST00000604143 237 ntBASIC2.38□□□□□ -2.03
CD4P01730 AC016727.1-205ENST00000605437 569 ntBASIC2.38□□□□□ -2.03
CD4P01730 AC124303.1-201ENST00000605703 360 ntBASIC2.38□□□□□ -2.03
CD4P01730 MIR6840-201ENST00000611937 71 ntBASIC2.38□□□□□ -2.03
CD4P01730 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC2.38□□□□□ -2.03
CD4P01730 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC2.38□□□□□ -2.03
CD4P01730 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC2.38□□□□□ -2.03
CD4P01730 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
CD4P01730 RNU1-58P-201ENST00000362413 163 ntBASIC2.37□□□□□ -2.03
CD4P01730 RNU1-76P-201ENST00000362903 159 ntBASIC2.37□□□□□ -2.03
CD4P01730 Y_RNA.332-201ENST00000365271 113 ntBASIC2.37□□□□□ -2.03
CD4P01730 RNU6-438P-201ENST00000365561 103 ntBASIC2.37□□□□□ -2.03
CD4P01730 RNA5SP213-201ENST00000391031 106 ntBASIC2.37□□□□□ -2.03
CD4P01730 SNORA48.3-201ENST00000391081 134 ntBASIC2.37□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 254.2 ms