Protein–RNA interactions for Protein: O60500

NPHS1, Nephrin, humanhuman

Predictions only

Length 1,241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHS1O60500 AC104027.1-201ENST00000521887 300 ntBASIC3.37□□□□□ -1.87
NPHS1O60500 EIF4A1P12-201ENST00000551910 141 ntBASIC3.37□□□□□ -1.87
NPHS1O60500 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC3.37□□□□□ -1.87
NPHS1O60500 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC3.37□□□□□ -1.87
NPHS1O60500 MIR3674-201ENST00000636576 68 ntBASIC3.37□□□□□ -1.87
NPHS1O60500 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
NPHS1O60500 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
NPHS1O60500 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.37□□□□□ -1.87
NPHS1O60500 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.36□□□□□ -1.87
NPHS1O60500 MFSD8-236ENST00000641509 4050 ntBASIC3.36□□□□□ -1.87
NPHS1O60500 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.36□□□□□ -1.87
NPHS1O60500 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.36□□□□□ -1.87
NPHS1O60500 ANKRD36BP1-201ENST00000358576 1779 ntBASIC3.36□□□□□ -1.87
NPHS1O60500 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
NPHS1O60500 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
NPHS1O60500 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
NPHS1O60500 RNA5SP51-201ENST00000364750 119 ntBASIC3.36□□□□□ -1.87
NPHS1O60500 RNU6-923P-201ENST00000364753 107 ntBASIC3.36□□□□□ -1.87
NPHS1O60500 SNORA73.2-201ENST00000364946 201 ntBASIC3.36□□□□□ -1.87
NPHS1O60500 RNU6-746P-201ENST00000384112 109 ntBASIC3.36□□□□□ -1.87
NPHS1O60500 RNU6-1310P-201ENST00000384153 107 ntBASIC3.36□□□□□ -1.87
NPHS1O60500 PVALB-202ENST00000404171 422 ntTSL 2 BASIC3.36□□□□□ -1.87
NPHS1O60500 Y_RNA.597-201ENST00000410463 100 ntBASIC3.36□□□□□ -1.87
NPHS1O60500 RNA5SP293-201ENST00000410527 113 ntBASIC3.36□□□□□ -1.87
NPHS1O60500 RN7SKP51-201ENST00000410781 304 ntBASIC3.36□□□□□ -1.87
NPHS1O60500 AL365496.1-201ENST00000426885 215 ntBASIC3.36□□□□□ -1.87
NPHS1O60500 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC3.36□□□□□ -1.87
NPHS1O60500 AC109925.1-201ENST00000478069 331 ntBASIC3.36□□□□□ -1.87
NPHS1O60500 AC145146.1-201ENST00000496370 254 ntBASIC3.36□□□□□ -1.87
NPHS1O60500 RNU6-191P-201ENST00000516295 94 ntBASIC3.36□□□□□ -1.87
NPHS1O60500 SNORA70.18-201ENST00000516696 98 ntBASIC3.36□□□□□ -1.87
NPHS1O60500 SNORD59.2-201ENST00000516873 68 ntBASIC3.36□□□□□ -1.87
NPHS1O60500 DEFB131C-201ENST00000528817 165 ntBASIC3.36□□□□□ -1.87
NPHS1O60500 MIR3160-1-201ENST00000577972 85 ntBASIC3.36□□□□□ -1.87
NPHS1O60500 MIR5685-201ENST00000579080 79 ntBASIC3.36□□□□□ -1.87
NPHS1O60500 MIR5047-201ENST00000579212 100 ntBASIC3.36□□□□□ -1.87
NPHS1O60500 AC073349.3-201ENST00000617616 186 ntBASIC3.36□□□□□ -1.87
NPHS1O60500 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC3.36□□□□□ -1.87
NPHS1O60500 U4.6-201ENST00000621618 127 ntBASIC3.36□□□□□ -1.87
NPHS1O60500 AC068724.3-201ENST00000625906 87 ntBASIC3.36□□□□□ -1.87
NPHS1O60500 AC073476.4-201ENST00000628409 72 ntBASIC3.36□□□□□ -1.87
NPHS1O60500 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.36□□□□□ -1.87
NPHS1O60500 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC3.36□□□□□ -1.87
NPHS1O60500 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC3.36□□□□□ -1.87
NPHS1O60500 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.36□□□□□ -1.87
NPHS1O60500 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.36□□□□□ -1.87
NPHS1O60500 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
NPHS1O60500 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.35□□□□□ -1.87
NPHS1O60500 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
NPHS1O60500 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
NPHS1O60500 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
NPHS1O60500 RNA5SP383-201ENST00000362934 120 ntBASIC3.35□□□□□ -1.87
NPHS1O60500 SNORD87-201ENST00000364849 89 ntBASIC3.35□□□□□ -1.87
NPHS1O60500 RNU6-918P-201ENST00000391219 106 ntBASIC3.35□□□□□ -1.87
NPHS1O60500 RNU2-54P-201ENST00000410299 190 ntBASIC3.35□□□□□ -1.87
NPHS1O60500 RNA5SP475-201ENST00000410568 110 ntBASIC3.35□□□□□ -1.87
NPHS1O60500 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC3.35□□□□□ -1.87
NPHS1O60500 AC009963.1-201ENST00000417265 157 ntBASIC3.35□□□□□ -1.87
NPHS1O60500 HMGN2P31-201ENST00000432430 273 ntBASIC3.35□□□□□ -1.87
NPHS1O60500 SNORA64.4-201ENST00000516632 81 ntBASIC3.35□□□□□ -1.87
NPHS1O60500 RNU6-1212P-201ENST00000517023 104 ntBASIC3.35□□□□□ -1.87
NPHS1O60500 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC3.35□□□□□ -1.87
NPHS1O60500 AC011471.1-201ENST00000585766 187 ntBASIC3.35□□□□□ -1.87
NPHS1O60500 DEFB117-201ENST00000602356 141 ntBASIC3.35□□□□□ -1.87
NPHS1O60500 AC072026.1-201ENST00000605023 201 ntBASIC3.35□□□□□ -1.87
NPHS1O60500 AC005562.2-201ENST00000618264 111 ntBASIC3.35□□□□□ -1.87
NPHS1O60500 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.35□□□□□ -1.87
NPHS1O60500 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
NPHS1O60500 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.34□□□□□ -1.87
NPHS1O60500 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.34□□□□□ -1.87
NPHS1O60500 RNU1-35P-201ENST00000362782 153 ntBASIC3.34□□□□□ -1.87
NPHS1O60500 RNU6-655P-201ENST00000362858 107 ntBASIC3.34□□□□□ -1.87
NPHS1O60500 RNU6-1210P-201ENST00000363775 107 ntBASIC3.34□□□□□ -1.87
NPHS1O60500 U3.9-201ENST00000363823 204 ntBASIC3.34□□□□□ -1.87
NPHS1O60500 SNORA18.2-201ENST00000383865 132 ntBASIC3.34□□□□□ -1.87
NPHS1O60500 RNU6-187P-201ENST00000384139 106 ntBASIC3.34□□□□□ -1.87
NPHS1O60500 RNU1-57P-201ENST00000384491 166 ntBASIC3.34□□□□□ -1.87
NPHS1O60500 U8.11-201ENST00000384699 133 ntBASIC3.34□□□□□ -1.87
NPHS1O60500 U8.12-201ENST00000384701 133 ntBASIC3.34□□□□□ -1.87
NPHS1O60500 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC3.34□□□□□ -1.87
NPHS1O60500 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC3.34□□□□□ -1.87
NPHS1O60500 AC004386.2-201ENST00000441858 148 ntBASIC3.34□□□□□ -1.87
NPHS1O60500 AL392103.1-201ENST00000447000 198 ntBASIC3.34□□□□□ -1.87
NPHS1O60500 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC3.34□□□□□ -1.87
NPHS1O60500 RPS3P1-201ENST00000456781 192 ntBASIC3.34□□□□□ -1.87
NPHS1O60500 SNORD105B-201ENST00000458770 79 ntBASIC3.34□□□□□ -1.87
NPHS1O60500 U8.18-201ENST00000459285 133 ntBASIC3.34□□□□□ -1.87
NPHS1O60500 RNU6-107P-201ENST00000516643 102 ntBASIC3.34□□□□□ -1.87
NPHS1O60500 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC3.34□□□□□ -1.87
NPHS1O60500 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC3.34□□□□□ -1.87
NPHS1O60500 MIR3133-201ENST00000583157 78 ntBASIC3.34□□□□□ -1.87
NPHS1O60500 TCL6_2.1-201ENST00000615162 119 ntBASIC3.34□□□□□ -1.87
NPHS1O60500 snoU18.1-201ENST00000629629 71 ntBASIC3.34□□□□□ -1.87
NPHS1O60500 U2.22-201ENST00000636441 106 ntBASIC3.34□□□□□ -1.87
NPHS1O60500 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.34□□□□□ -1.87
NPHS1O60500 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
NPHS1O60500 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
NPHS1O60500 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
NPHS1O60500 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC3.33□□□□□ -1.88
NPHS1O60500 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.33□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 185.3 ms