Protein–RNA interactions for Protein: O43474

KLF4, Krueppel-like factor 4, humanhuman

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLF4O43474 AC005042.3-201ENST00000453230 174 ntBASIC3.33□□□□□ -1.88
KLF4O43474 MIR449C-201ENST00000516047 92 ntBASIC3.33□□□□□ -1.88
KLF4O43474 RNU6-496P-201ENST00000516145 99 ntBASIC3.33□□□□□ -1.88
KLF4O43474 AC022616.8-201ENST00000533569 253 ntBASIC3.33□□□□□ -1.88
KLF4O43474 MIR3186-201ENST00000577404 85 ntBASIC3.33□□□□□ -1.88
KLF4O43474 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC3.33□□□□□ -1.88
KLF4O43474 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC3.33□□□□□ -1.88
KLF4O43474 AC023043.3-201ENST00000593113 385 ntBASIC3.33□□□□□ -1.88
KLF4O43474 RNVU1-4-201ENST00000612985 164 ntBASIC3.33□□□□□ -1.88
KLF4O43474 AC004467.1-201ENST00000615678 330 ntBASIC3.33□□□□□ -1.88
KLF4O43474 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
KLF4O43474 AP000553.6-201ENST00000641242 118 ntBASIC3.33□□□□□ -1.88
KLF4O43474 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC3.33□□□□□ -1.88
KLF4O43474 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC3.33□□□□□ -1.88
KLF4O43474 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
KLF4O43474 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.33□□□□□ -1.88
KLF4O43474 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.32□□□□□ -1.88
KLF4O43474 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC3.32□□□□□ -1.88
KLF4O43474 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
KLF4O43474 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC3.32□□□□□ -1.88
KLF4O43474 TNPO1P3-201ENST00000436471 2662 ntBASIC3.32□□□□□ -1.88
KLF4O43474 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC3.32□□□□□ -1.88
KLF4O43474 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.32□□□□□ -1.88
KLF4O43474 MIR410-201ENST00000362222 80 ntBASIC3.32□□□□□ -1.88
KLF4O43474 RNU6-290P-201ENST00000365212 101 ntBASIC3.32□□□□□ -1.88
KLF4O43474 Y_RNA.331-201ENST00000365267 102 ntBASIC3.32□□□□□ -1.88
KLF4O43474 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC3.32□□□□□ -1.88
KLF4O43474 MIR215-201ENST00000384858 110 ntBASIC3.32□□□□□ -1.88
KLF4O43474 RNU6-220P-201ENST00000390919 107 ntBASIC3.32□□□□□ -1.88
KLF4O43474 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC3.32□□□□□ -1.88
KLF4O43474 TRBV25OR9-2-201ENST00000438417 374 ntBASIC3.32□□□□□ -1.88
KLF4O43474 AL445687.1-201ENST00000439946 251 ntBASIC3.32□□□□□ -1.88
KLF4O43474 RPS29P2-201ENST00000479278 136 ntBASIC3.32□□□□□ -1.88
KLF4O43474 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC3.32□□□□□ -1.88
KLF4O43474 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC3.32□□□□□ -1.88
KLF4O43474 RNU6-579P-201ENST00000516879 102 ntBASIC3.32□□□□□ -1.88
KLF4O43474 AC109329.2-201ENST00000519658 482 ntBASIC3.32□□□□□ -1.88
KLF4O43474 MIR3944-201ENST00000581277 108 ntBASIC3.32□□□□□ -1.88
KLF4O43474 MIR5187-201ENST00000583479 76 ntBASIC3.32□□□□□ -1.88
KLF4O43474 RMST_8.1-201ENST00000610287 165 ntBASIC3.32□□□□□ -1.88
KLF4O43474 AC008873.1-201ENST00000625051 138 ntBASIC3.32□□□□□ -1.88
KLF4O43474 AC009093.8-201ENST00000641769 292 ntBASIC3.32□□□□□ -1.88
KLF4O43474 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC3.32□□□□□ -1.88
KLF4O43474 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC3.32□□□□□ -1.88
KLF4O43474 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
KLF4O43474 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
KLF4O43474 AC000403.1-201ENST00000613696 3585 ntBASIC3.32□□□□□ -1.88
KLF4O43474 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
KLF4O43474 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
KLF4O43474 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
KLF4O43474 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC3.31□□□□□ -1.88
KLF4O43474 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
KLF4O43474 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC3.31□□□□□ -1.88
KLF4O43474 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
KLF4O43474 Y_RNA.14-201ENST00000362415 103 ntBASIC3.31□□□□□ -1.88
KLF4O43474 SNORD87-201ENST00000364849 89 ntBASIC3.31□□□□□ -1.88
KLF4O43474 MIR7-3-201ENST00000384898 110 ntBASIC3.31□□□□□ -1.88
KLF4O43474 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
KLF4O43474 MIR548H3-201ENST00000408771 118 ntBASIC3.31□□□□□ -1.88
KLF4O43474 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC3.31□□□□□ -1.88
KLF4O43474 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC3.31□□□□□ -1.88
KLF4O43474 AL035423.1-201ENST00000420331 213 ntBASIC3.31□□□□□ -1.88
KLF4O43474 ARL5AP4-201ENST00000430731 512 ntBASIC3.31□□□□□ -1.88
KLF4O43474 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.31□□□□□ -1.88
KLF4O43474 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.31□□□□□ -1.88
KLF4O43474 AC023157.2-201ENST00000540596 141 ntBASIC3.31□□□□□ -1.88
KLF4O43474 AC022441.3-201ENST00000605737 136 ntBASIC3.31□□□□□ -1.88
KLF4O43474 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
KLF4O43474 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
KLF4O43474 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC3.31□□□□□ -1.88
KLF4O43474 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
KLF4O43474 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
KLF4O43474 SNORA63.1-201ENST00000362493 131 ntBASIC3.3□□□□□ -1.88
KLF4O43474 SNORD31B-201ENST00000364977 69 ntBASIC3.3□□□□□ -1.88
KLF4O43474 SNORA51.4-201ENST00000364993 124 ntBASIC3.3□□□□□ -1.88
KLF4O43474 Y_RNA.478-201ENST00000384358 107 ntBASIC3.3□□□□□ -1.88
KLF4O43474 MIR1283-1-201ENST00000408494 87 ntBASIC3.3□□□□□ -1.88
KLF4O43474 RNU4-30P-201ENST00000410245 143 ntBASIC3.3□□□□□ -1.88
KLF4O43474 AC107222.1-201ENST00000510899 637 ntBASIC3.3□□□□□ -1.88
KLF4O43474 RNU6-1338P-201ENST00000516328 91 ntBASIC3.3□□□□□ -1.88
KLF4O43474 RNU6-965P-201ENST00000516721 96 ntBASIC3.3□□□□□ -1.88
KLF4O43474 DEFB108E-201ENST00000524692 240 ntBASIC3.3□□□□□ -1.88
KLF4O43474 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC3.3□□□□□ -1.88
KLF4O43474 MIR4425-201ENST00000580572 84 ntBASIC3.3□□□□□ -1.88
KLF4O43474 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC3.3□□□□□ -1.88
KLF4O43474 SDR42E1P4-201ENST00000620894 481 ntBASIC3.3□□□□□ -1.88
KLF4O43474 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC3.3□□□□□ -1.88
KLF4O43474 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
KLF4O43474 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
KLF4O43474 AC092593.1-201ENST00000515413 1815 ntBASIC3.3□□□□□ -1.88
KLF4O43474 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC3.3□□□□□ -1.88
KLF4O43474 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.29□□□□□ -1.88
KLF4O43474 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
KLF4O43474 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
KLF4O43474 SNORD46.1-201ENST00000364139 104 ntBASIC3.29□□□□□ -1.88
KLF4O43474 RNU6-1180P-201ENST00000364935 107 ntBASIC3.29□□□□□ -1.88
KLF4O43474 Y_RNA.307-201ENST00000365022 117 ntBASIC3.29□□□□□ -1.88
KLF4O43474 RNU6-514P-201ENST00000384208 107 ntBASIC3.29□□□□□ -1.88
KLF4O43474 Y_RNA.518-201ENST00000384552 113 ntBASIC3.29□□□□□ -1.88
KLF4O43474 Y_RNA.569-201ENST00000384749 103 ntBASIC3.29□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 298.6 ms