Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC4.17□□□□□ -1.74
TMEM88BA6NKF7 Z83843.1-201ENST00000604070 3685 ntBASIC4.17□□□□□ -1.74
TMEM88BA6NKF7 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
TMEM88BA6NKF7 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
TMEM88BA6NKF7 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC4.16□□□□□ -1.74
TMEM88BA6NKF7 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
TMEM88BA6NKF7 AL353746.1-201ENST00000566293 6881 ntBASIC4.16□□□□□ -1.74
TMEM88BA6NKF7 RNU6-740P-201ENST00000364734 105 ntBASIC4.16□□□□□ -1.74
TMEM88BA6NKF7 TOMM22P2-201ENST00000430735 237 ntBASIC4.16□□□□□ -1.74
TMEM88BA6NKF7 MRPS10P1-201ENST00000448483 130 ntBASIC4.16□□□□□ -1.74
TMEM88BA6NKF7 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC4.16□□□□□ -1.74
TMEM88BA6NKF7 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC4.16□□□□□ -1.74
TMEM88BA6NKF7 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC4.16□□□□□ -1.74
TMEM88BA6NKF7 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC4.16□□□□□ -1.74
TMEM88BA6NKF7 Z83818.1-201ENST00000603584 150 ntBASIC4.16□□□□□ -1.74
TMEM88BA6NKF7 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC4.16□□□□□ -1.74
TMEM88BA6NKF7 MIR7157-201ENST00000635801 60 ntBASIC4.16□□□□□ -1.74
TMEM88BA6NKF7 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC4.16□□□□□ -1.74
TMEM88BA6NKF7 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
TMEM88BA6NKF7 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC4.16□□□□□ -1.74
TMEM88BA6NKF7 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
TMEM88BA6NKF7 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.74
TMEM88BA6NKF7 GABRG2-229ENST00000641017 3628 ntBASIC4.15□□□□□ -1.75
TMEM88BA6NKF7 HMGN2P8-201ENST00000391458 268 ntBASIC4.15□□□□□ -1.75
TMEM88BA6NKF7 RNU4-47P-201ENST00000410876 114 ntBASIC4.15□□□□□ -1.75
TMEM88BA6NKF7 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC4.15□□□□□ -1.75
TMEM88BA6NKF7 AC074290.1-201ENST00000448883 135 ntBASIC4.15□□□□□ -1.75
TMEM88BA6NKF7 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC4.15□□□□□ -1.75
TMEM88BA6NKF7 SRIP1-201ENST00000489235 288 ntBASIC4.15□□□□□ -1.75
TMEM88BA6NKF7 SEM1P1-201ENST00000506694 209 ntBASIC4.15□□□□□ -1.75
TMEM88BA6NKF7 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC4.15□□□□□ -1.75
TMEM88BA6NKF7 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC4.15□□□□□ -1.75
TMEM88BA6NKF7 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC4.15□□□□□ -1.75
TMEM88BA6NKF7 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC4.15□□□□□ -1.75
TMEM88BA6NKF7 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
TMEM88BA6NKF7 AC135776.4-201ENST00000624300 1904 ntBASIC4.15□□□□□ -1.75
TMEM88BA6NKF7 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.75
TMEM88BA6NKF7 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
TMEM88BA6NKF7 AC103988.1-201ENST00000566382 2177 ntBASIC4.14□□□□□ -1.75
TMEM88BA6NKF7 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC4.14□□□□□ -1.75
TMEM88BA6NKF7 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
TMEM88BA6NKF7 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC4.14□□□□□ -1.75
TMEM88BA6NKF7 Y_RNA.270-201ENST00000364693 104 ntBASIC4.14□□□□□ -1.75
TMEM88BA6NKF7 Y_RNA.274-201ENST00000364714 101 ntBASIC4.14□□□□□ -1.75
TMEM88BA6NKF7 CD24P4-201ENST00000382840 243 ntBASIC4.14□□□□□ -1.75
TMEM88BA6NKF7 Y_RNA.555-201ENST00000384673 110 ntBASIC4.14□□□□□ -1.75
TMEM88BA6NKF7 SNORA40.19-201ENST00000390846 128 ntBASIC4.14□□□□□ -1.75
TMEM88BA6NKF7 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
TMEM88BA6NKF7 AL603908.1-201ENST00000406098 201 ntBASIC4.14□□□□□ -1.75
TMEM88BA6NKF7 MIR1261-201ENST00000408659 82 ntBASIC4.14□□□□□ -1.75
TMEM88BA6NKF7 RPL19P1-201ENST00000411635 428 ntBASIC4.14□□□□□ -1.75
TMEM88BA6NKF7 AC009963.1-201ENST00000417265 157 ntBASIC4.14□□□□□ -1.75
TMEM88BA6NKF7 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC4.14□□□□□ -1.75
TMEM88BA6NKF7 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC4.14□□□□□ -1.75
TMEM88BA6NKF7 RPL31P41-201ENST00000477967 372 ntBASIC4.14□□□□□ -1.75
TMEM88BA6NKF7 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC4.14□□□□□ -1.75
TMEM88BA6NKF7 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC4.14□□□□□ -1.75
TMEM88BA6NKF7 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC4.14□□□□□ -1.75
TMEM88BA6NKF7 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC4.14□□□□□ -1.75
TMEM88BA6NKF7 AC010329.5-201ENST00000623497 2174 ntBASIC4.14□□□□□ -1.75
TMEM88BA6NKF7 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC4.13□□□□□ -1.75
TMEM88BA6NKF7 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC4.13□□□□□ -1.75
TMEM88BA6NKF7 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC4.13□□□□□ -1.75
TMEM88BA6NKF7 RNU1-75P-201ENST00000347264 129 ntBASIC4.13□□□□□ -1.75
TMEM88BA6NKF7 Y_RNA.82-201ENST00000363000 102 ntBASIC4.13□□□□□ -1.75
TMEM88BA6NKF7 Y_RNA.92-201ENST00000363043 102 ntBASIC4.13□□□□□ -1.75
TMEM88BA6NKF7 U3.8-201ENST00000363675 217 ntBASIC4.13□□□□□ -1.75
TMEM88BA6NKF7 Y_RNA.235-201ENST00000364412 102 ntBASIC4.13□□□□□ -1.75
TMEM88BA6NKF7 Y_RNA.306-201ENST00000365015 102 ntBASIC4.13□□□□□ -1.75
TMEM88BA6NKF7 Y_RNA.312-201ENST00000365089 102 ntBASIC4.13□□□□□ -1.75
TMEM88BA6NKF7 Y_RNA.322-201ENST00000365151 102 ntBASIC4.13□□□□□ -1.75
TMEM88BA6NKF7 AL357075.1-201ENST00000404107 726 ntBASIC4.13□□□□□ -1.75
TMEM88BA6NKF7 HDGFP1-201ENST00000405943 252 ntBASIC4.13□□□□□ -1.75
TMEM88BA6NKF7 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC4.13□□□□□ -1.75
TMEM88BA6NKF7 RPL23AP3-201ENST00000453844 468 ntBASIC4.13□□□□□ -1.75
TMEM88BA6NKF7 Y_RNA.650-201ENST00000459002 102 ntBASIC4.13□□□□□ -1.75
TMEM88BA6NKF7 Y_RNA.644-201ENST00000459006 113 ntBASIC4.13□□□□□ -1.75
TMEM88BA6NKF7 KRTAP13-6P-201ENST00000508999 371 ntBASIC4.13□□□□□ -1.75
TMEM88BA6NKF7 RAC1P5-201ENST00000512182 576 ntBASIC4.13□□□□□ -1.75
TMEM88BA6NKF7 RNU6-237P-201ENST00000515985 71 ntBASIC4.13□□□□□ -1.75
TMEM88BA6NKF7 Y_RNA.674-201ENST00000516362 113 ntBASIC4.13□□□□□ -1.75
TMEM88BA6NKF7 RNU5F-4P-201ENST00000516581 114 ntBASIC4.13□□□□□ -1.75
TMEM88BA6NKF7 Y_RNA.777-201ENST00000516982 102 ntBASIC4.13□□□□□ -1.75
TMEM88BA6NKF7 Y_RNA.771-201ENST00000598668 102 ntBASIC4.13□□□□□ -1.75
TMEM88BA6NKF7 AC004792.1-201ENST00000614523 137 ntBASIC4.13□□□□□ -1.75
TMEM88BA6NKF7 Y_RNA.789-201ENST00000622480 102 ntBASIC4.13□□□□□ -1.75
TMEM88BA6NKF7 AP003355.3-201ENST00000623465 114 ntBASIC4.13□□□□□ -1.75
TMEM88BA6NKF7 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC4.13□□□□□ -1.75
TMEM88BA6NKF7 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
TMEM88BA6NKF7 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC4.12□□□□□ -1.75
TMEM88BA6NKF7 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC4.12□□□□□ -1.75
TMEM88BA6NKF7 MIR411-201ENST00000362239 96 ntBASIC4.12□□□□□ -1.75
TMEM88BA6NKF7 Y_RNA.101-201ENST00000363154 102 ntBASIC4.12□□□□□ -1.75
TMEM88BA6NKF7 RNU6-324P-201ENST00000363957 106 ntBASIC4.12□□□□□ -1.75
TMEM88BA6NKF7 Y_RNA.292-201ENST00000364904 97 ntBASIC4.12□□□□□ -1.75
TMEM88BA6NKF7 Y_RNA.418-201ENST00000384029 102 ntBASIC4.12□□□□□ -1.75
TMEM88BA6NKF7 MIR1294-201ENST00000408503 142 ntBASIC4.12□□□□□ -1.75
TMEM88BA6NKF7 RN7SKP111-201ENST00000410349 271 ntBASIC4.12□□□□□ -1.75
TMEM88BA6NKF7 AC140059.1-201ENST00000489238 361 ntBASIC4.12□□□□□ -1.75
TMEM88BA6NKF7 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC4.12□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 206.7 ms