Protein–RNA interactions for Protein: A6NE82

MBD3L3, Putative methyl-CpG-binding domain protein 3-like 3, humanhuman

Predicted RBP Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L3A6NE82 AL390123.1-201ENST00000603216 237 ntBASIC2.75□□□□□ -1.97
MBD3L3A6NE82 AC116312.1-201ENST00000606841 314 ntBASIC2.75□□□□□ -1.97
MBD3L3A6NE82 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC2.75□□□□□ -1.97
MBD3L3A6NE82 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC2.75□□□□□ -1.97
MBD3L3A6NE82 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC2.75□□□□□ -1.97
MBD3L3A6NE82 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC2.75□□□□□ -1.97
MBD3L3A6NE82 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2.75□□□□□ -1.97
MBD3L3A6NE82 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC2.75□□□□□ -1.97
MBD3L3A6NE82 AC000403.1-201ENST00000613696 3585 ntBASIC2.75□□□□□ -1.97
MBD3L3A6NE82 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
MBD3L3A6NE82 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
MBD3L3A6NE82 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC2.74□□□□□ -1.97
MBD3L3A6NE82 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.74□□□□□ -1.97
MBD3L3A6NE82 FAM35CP-201ENST00000554755 2470 ntBASIC2.74□□□□□ -1.97
MBD3L3A6NE82 RNU6-245P-201ENST00000384020 107 ntBASIC2.74□□□□□ -1.97
MBD3L3A6NE82 RNY3P4-201ENST00000384428 101 ntBASIC2.74□□□□□ -1.97
MBD3L3A6NE82 Y_RNA.510-201ENST00000384511 114 ntBASIC2.74□□□□□ -1.97
MBD3L3A6NE82 RNU6-823P-201ENST00000391042 103 ntBASIC2.74□□□□□ -1.97
MBD3L3A6NE82 snosnR66.1-201ENST00000391095 99 ntBASIC2.74□□□□□ -1.97
MBD3L3A6NE82 MIR1294-201ENST00000408503 142 ntBASIC2.74□□□□□ -1.97
MBD3L3A6NE82 COTL1P1-201ENST00000422309 375 ntBASIC2.74□□□□□ -1.97
MBD3L3A6NE82 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC2.74□□□□□ -1.97
MBD3L3A6NE82 AC093852.1-201ENST00000503587 266 ntBASIC2.74□□□□□ -1.97
MBD3L3A6NE82 MIR449C-201ENST00000516047 92 ntBASIC2.74□□□□□ -1.97
MBD3L3A6NE82 RNU6-56P-201ENST00000516986 93 ntBASIC2.74□□□□□ -1.97
MBD3L3A6NE82 MIR5006-201ENST00000583027 110 ntBASIC2.74□□□□□ -1.97
MBD3L3A6NE82 AC010999.1-201ENST00000611856 324 ntBASIC2.74□□□□□ -1.97
MBD3L3A6NE82 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC2.74□□□□□ -1.97
MBD3L3A6NE82 AC006386.2-201ENST00000624491 75 ntBASIC2.74□□□□□ -1.97
MBD3L3A6NE82 AC012005.1-201ENST00000624575 75 ntBASIC2.74□□□□□ -1.97
MBD3L3A6NE82 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
MBD3L3A6NE82 AL365361.1-201ENST00000566942 3481 ntBASIC2.73□□□□□ -1.97
MBD3L3A6NE82 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC2.73□□□□□ -1.97
MBD3L3A6NE82 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
MBD3L3A6NE82 MIR22-201ENST00000362190 85 ntBASIC2.73□□□□□ -1.97
MBD3L3A6NE82 SNORD56.5-201ENST00000364281 72 ntBASIC2.73□□□□□ -1.97
MBD3L3A6NE82 RNU4-50P-201ENST00000364361 141 ntBASIC2.73□□□□□ -1.97
MBD3L3A6NE82 SNORD32B-201ENST00000364460 84 ntBASIC2.73□□□□□ -1.97
MBD3L3A6NE82 RNA5SP125-201ENST00000364843 120 ntBASIC2.73□□□□□ -1.97
MBD3L3A6NE82 AP002088.1-201ENST00000382740 395 ntBASIC2.73□□□□□ -1.97
MBD3L3A6NE82 RNU6-281P-201ENST00000384212 103 ntBASIC2.73□□□□□ -1.97
MBD3L3A6NE82 Y_RNA.459-201ENST00000384251 102 ntBASIC2.73□□□□□ -1.97
MBD3L3A6NE82 AC107083.1-201ENST00000439643 279 ntBASIC2.73□□□□□ -1.97
MBD3L3A6NE82 AC004386.2-201ENST00000441858 148 ntBASIC2.73□□□□□ -1.97
MBD3L3A6NE82 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC2.73□□□□□ -1.97
MBD3L3A6NE82 HMGN1P18-201ENST00000457642 277 ntBASIC2.73□□□□□ -1.97
MBD3L3A6NE82 AC010401.1-201ENST00000463867 348 ntBASIC2.73□□□□□ -1.97
MBD3L3A6NE82 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC2.73□□□□□ -1.97
MBD3L3A6NE82 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC2.73□□□□□ -1.97
MBD3L3A6NE82 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC2.73□□□□□ -1.97
MBD3L3A6NE82 AC113195.1-201ENST00000579952 141 ntBASIC2.73□□□□□ -1.97
MBD3L3A6NE82 AL355297.2-201ENST00000604792 129 ntBASIC2.73□□□□□ -1.97
MBD3L3A6NE82 TCL6_2.1-201ENST00000615162 119 ntBASIC2.73□□□□□ -1.97
MBD3L3A6NE82 DLEU2_2.2-201ENST00000615474 90 ntBASIC2.73□□□□□ -1.97
MBD3L3A6NE82 U6.92-201ENST00000636464 89 ntBASIC2.73□□□□□ -1.97
MBD3L3A6NE82 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC2.73□□□□□ -1.97
MBD3L3A6NE82 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
MBD3L3A6NE82 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC2.72□□□□□ -1.97
MBD3L3A6NE82 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.72□□□□□ -1.97
MBD3L3A6NE82 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC2.72□□□□□ -1.97
MBD3L3A6NE82 RNU1-75P-201ENST00000347264 129 ntBASIC2.72□□□□□ -1.97
MBD3L3A6NE82 RNU1-76P-201ENST00000362903 159 ntBASIC2.72□□□□□ -1.97
MBD3L3A6NE82 RNU6-926P-201ENST00000384075 107 ntBASIC2.72□□□□□ -1.97
MBD3L3A6NE82 Y_RNA.471-201ENST00000384312 102 ntBASIC2.72□□□□□ -1.97
MBD3L3A6NE82 SNORD67-201ENST00000390833 111 ntBASIC2.72□□□□□ -1.97
MBD3L3A6NE82 RNA5SP213-201ENST00000391031 106 ntBASIC2.72□□□□□ -1.97
MBD3L3A6NE82 SNORD78.2-201ENST00000391076 69 ntBASIC2.72□□□□□ -1.97
MBD3L3A6NE82 DPH3P2-201ENST00000422618 250 ntBASIC2.72□□□□□ -1.97
MBD3L3A6NE82 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC2.72□□□□□ -1.97
MBD3L3A6NE82 CBX3P6-201ENST00000430257 527 ntBASIC2.72□□□□□ -1.97
MBD3L3A6NE82 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC2.72□□□□□ -1.97
MBD3L3A6NE82 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC2.72□□□□□ -1.97
MBD3L3A6NE82 RNU5F-4P-201ENST00000516581 114 ntBASIC2.72□□□□□ -1.97
MBD3L3A6NE82 RNU6-965P-201ENST00000516721 96 ntBASIC2.72□□□□□ -1.97
MBD3L3A6NE82 RN7SKP40-201ENST00000517211 242 ntBASIC2.72□□□□□ -1.97
MBD3L3A6NE82 SCARNA20.6-201ENST00000517251 106 ntBASIC2.72□□□□□ -1.97
MBD3L3A6NE82 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC2.72□□□□□ -1.97
MBD3L3A6NE82 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC2.72□□□□□ -1.97
MBD3L3A6NE82 DEFB131C-201ENST00000528817 165 ntBASIC2.72□□□□□ -1.97
MBD3L3A6NE82 HSPE1P20-201ENST00000538133 289 ntBASIC2.72□□□□□ -1.97
MBD3L3A6NE82 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC2.72□□□□□ -1.97
MBD3L3A6NE82 AC005034.5-201ENST00000604219 466 ntBASIC2.72□□□□□ -1.97
MBD3L3A6NE82 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC2.72□□□□□ -1.97
MBD3L3A6NE82 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC2.72□□□□□ -1.97
MBD3L3A6NE82 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
MBD3L3A6NE82 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
MBD3L3A6NE82 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC2.71□□□□□ -1.98
MBD3L3A6NE82 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC2.71□□□□□ -1.98
MBD3L3A6NE82 RNU6-727P-201ENST00000363592 107 ntBASIC2.71□□□□□ -1.98
MBD3L3A6NE82 Y_RNA.179-201ENST00000363844 90 ntBASIC2.71□□□□□ -1.98
MBD3L3A6NE82 SNORA80A-201ENST00000363922 136 ntBASIC2.71□□□□□ -1.98
MBD3L3A6NE82 RNU6-26P-201ENST00000383985 107 ntBASIC2.71□□□□□ -1.98
MBD3L3A6NE82 SNORA18.3-201ENST00000384122 132 ntBASIC2.71□□□□□ -1.98
MBD3L3A6NE82 RNU6-793P-201ENST00000384233 104 ntBASIC2.71□□□□□ -1.98
MBD3L3A6NE82 RNU6-318P-201ENST00000384283 103 ntBASIC2.71□□□□□ -1.98
MBD3L3A6NE82 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC2.71□□□□□ -1.98
MBD3L3A6NE82 RNU2-32P-201ENST00000411193 191 ntBASIC2.71□□□□□ -1.98
MBD3L3A6NE82 BX679664.1-201ENST00000434429 253 ntBASIC2.71□□□□□ -1.98
MBD3L3A6NE82 AC010095.1-201ENST00000443543 144 ntBASIC2.71□□□□□ -1.98
MBD3L3A6NE82 AC104389.3-201ENST00000445629 235 ntBASIC2.71□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 164.1 ms