Protein–RNA interactions for Protein: A0A0B4J241

TRAV13-1, T-cell receptor alpha variable 13-1 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV13-1A0A0B4J241 AC078809.1-201ENST00000427601 140 ntBASIC0.08□□□□□ -2.4
TRAV13-1A0A0B4J241 TIMM9P3-201ENST00000428659 274 ntBASIC0.08□□□□□ -2.4
TRAV13-1A0A0B4J241 MTND1P32-201ENST00000433043 938 ntBASIC0.08□□□□□ -2.4
TRAV13-1A0A0B4J241 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC0.08□□□□□ -2.4
TRAV13-1A0A0B4J241 AC022364.2-201ENST00000457963 554 ntBASIC0.08□□□□□ -2.4
TRAV13-1A0A0B4J241 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC0.08□□□□□ -2.4
TRAV13-1A0A0B4J241 NAF1-205ENST00000509434 385 ntTSL 3 BASIC0.08□□□□□ -2.4
TRAV13-1A0A0B4J241 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC0.08□□□□□ -2.4
TRAV13-1A0A0B4J241 RNU6-123P-201ENST00000516163 102 ntBASIC0.08□□□□□ -2.4
TRAV13-1A0A0B4J241 AC009712.1-201ENST00000564938 316 ntBASIC0.08□□□□□ -2.4
TRAV13-1A0A0B4J241 AC090517.1-201ENST00000569307 266 ntBASIC0.08□□□□□ -2.4
TRAV13-1A0A0B4J241 MIR5697-201ENST00000578045 78 ntBASIC0.08□□□□□ -2.4
TRAV13-1A0A0B4J241 AC005776.1-201ENST00000603164 290 ntBASIC0.08□□□□□ -2.4
TRAV13-1A0A0B4J241 AL357312.1-201ENST00000603879 298 ntBASIC0.08□□□□□ -2.4
TRAV13-1A0A0B4J241 AL356157.2-201ENST00000605122 111 ntBASIC0.08□□□□□ -2.4
TRAV13-1A0A0B4J241 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC0.08□□□□□ -2.4
TRAV13-1A0A0B4J241 AL445523.1-201ENST00000451184 1362 ntBASIC0.07□□□□□ -2.4
TRAV13-1A0A0B4J241 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC0.07□□□□□ -2.4
TRAV13-1A0A0B4J241 RNU6-371P-201ENST00000364283 108 ntBASIC0.07□□□□□ -2.4
TRAV13-1A0A0B4J241 RNU4-48P-201ENST00000365559 182 ntBASIC0.07□□□□□ -2.4
TRAV13-1A0A0B4J241 RNU6-692P-201ENST00000384496 107 ntBASIC0.07□□□□□ -2.4
TRAV13-1A0A0B4J241 MIR660-201ENST00000385235 97 ntBASIC0.07□□□□□ -2.4
TRAV13-1A0A0B4J241 MIR300-201ENST00000401138 83 ntBASIC0.07□□□□□ -2.4
TRAV13-1A0A0B4J241 MIR936-201ENST00000401264 98 ntBASIC0.07□□□□□ -2.4
TRAV13-1A0A0B4J241 AL451046.2-201ENST00000403074 277 ntBASIC0.07□□□□□ -2.4
TRAV13-1A0A0B4J241 EEF1A1P40-201ENST00000412883 573 ntBASIC0.07□□□□□ -2.4
TRAV13-1A0A0B4J241 RPL22P18-201ENST00000417197 377 ntBASIC0.07□□□□□ -2.4
TRAV13-1A0A0B4J241 HSFY7P-201ENST00000432672 318 ntBASIC0.07□□□□□ -2.4
TRAV13-1A0A0B4J241 HSFY8P-201ENST00000437934 318 ntBASIC0.07□□□□□ -2.4
TRAV13-1A0A0B4J241 TAF9P1-201ENST00000445421 515 ntBASIC0.07□□□□□ -2.4
TRAV13-1A0A0B4J241 RPS20P10-201ENST00000451209 253 ntBASIC0.07□□□□□ -2.4
TRAV13-1A0A0B4J241 TAF9P2-201ENST00000454958 515 ntBASIC0.07□□□□□ -2.4
TRAV13-1A0A0B4J241 AK3P2-201ENST00000507976 429 ntBASIC0.07□□□□□ -2.4
TRAV13-1A0A0B4J241 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC0.07□□□□□ -2.4
TRAV13-1A0A0B4J241 AC112206.4-201ENST00000515142 405 ntBASIC0.07□□□□□ -2.4
TRAV13-1A0A0B4J241 RNU6-1146P-201ENST00000516282 102 ntBASIC0.07□□□□□ -2.4
TRAV13-1A0A0B4J241 RNU6-1223P-201ENST00000517124 104 ntBASIC0.07□□□□□ -2.4
TRAV13-1A0A0B4J241 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC0.07□□□□□ -2.4
TRAV13-1A0A0B4J241 AC078795.3-201ENST00000602913 472 ntBASIC0.07□□□□□ -2.4
TRAV13-1A0A0B4J241 RNU6-88P-201ENST00000606801 100 ntBASIC0.07□□□□□ -2.4
TRAV13-1A0A0B4J241 AC097065.2-201ENST00000608159 533 ntBASIC0.07□□□□□ -2.4
TRAV13-1A0A0B4J241 AC072039.2-201ENST00000608883 439 ntBASIC0.07□□□□□ -2.4
TRAV13-1A0A0B4J241 7SK.10-201ENST00000621414 298 ntBASIC0.07□□□□□ -2.4
TRAV13-1A0A0B4J241 Z69720.2-201ENST00000624755 279 ntBASIC0.07□□□□□ -2.4
TRAV13-1A0A0B4J241 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC0.06□□□□□ -2.4
TRAV13-1A0A0B4J241 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC0.06□□□□□ -2.4
TRAV13-1A0A0B4J241 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.06□□□□□ -2.4
TRAV13-1A0A0B4J241 RNU6-342P-201ENST00000384521 104 ntBASIC0.06□□□□□ -2.4
TRAV13-1A0A0B4J241 RNU6-417P-201ENST00000384712 107 ntBASIC0.06□□□□□ -2.4
TRAV13-1A0A0B4J241 SNORA12.1-201ENST00000390873 148 ntBASIC0.06□□□□□ -2.4
TRAV13-1A0A0B4J241 RNA5SP323-201ENST00000391094 133 ntBASIC0.06□□□□□ -2.4
TRAV13-1A0A0B4J241 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.06□□□□□ -2.4
TRAV13-1A0A0B4J241 RNU6-293P-201ENST00000411259 106 ntBASIC0.06□□□□□ -2.4
TRAV13-1A0A0B4J241 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC0.06□□□□□ -2.4
TRAV13-1A0A0B4J241 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC0.06□□□□□ -2.4
TRAV13-1A0A0B4J241 MTND4P15-201ENST00000437913 1033 ntBASIC0.06□□□□□ -2.4
TRAV13-1A0A0B4J241 AC245047.8-201ENST00000456455 284 ntBASIC0.06□□□□□ -2.4
TRAV13-1A0A0B4J241 RNU6-1132P-201ENST00000459214 107 ntBASIC0.06□□□□□ -2.4
TRAV13-1A0A0B4J241 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC0.06□□□□□ -2.4
TRAV13-1A0A0B4J241 RNU6-405P-201ENST00000516637 110 ntBASIC0.06□□□□□ -2.4
TRAV13-1A0A0B4J241 RNU6-467P-201ENST00000517027 110 ntBASIC0.06□□□□□ -2.4
TRAV13-1A0A0B4J241 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC0.06□□□□□ -2.4
TRAV13-1A0A0B4J241 AC106038.2-201ENST00000520706 568 ntBASIC0.06□□□□□ -2.4
TRAV13-1A0A0B4J241 AC068587.4-201ENST00000533893 186 ntBASIC0.06□□□□□ -2.4
TRAV13-1A0A0B4J241 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC0.06□□□□□ -2.4
TRAV13-1A0A0B4J241 AL078603.1-201ENST00000603824 313 ntBASIC0.06□□□□□ -2.4
TRAV13-1A0A0B4J241 AC022217.4-201ENST00000604389 163 ntBASIC0.06□□□□□ -2.4
TRAV13-1A0A0B4J241 AC009994.1-201ENST00000606889 253 ntBASIC0.06□□□□□ -2.4
TRAV13-1A0A0B4J241 AC073349.3-201ENST00000617616 186 ntBASIC0.06□□□□□ -2.4
TRAV13-1A0A0B4J241 MIR8054-201ENST00000620877 86 ntBASIC0.06□□□□□ -2.4
TRAV13-1A0A0B4J241 RNU6-199P-201ENST00000362954 107 ntBASIC0.05□□□□□ -2.4
TRAV13-1A0A0B4J241 Y_RNA.287-201ENST00000364853 94 ntBASIC0.05□□□□□ -2.4
TRAV13-1A0A0B4J241 SNORA36.2-201ENST00000384004 127 ntBASIC0.05□□□□□ -2.4
TRAV13-1A0A0B4J241 MTND3P20-201ENST00000407663 186 ntBASIC0.05□□□□□ -2.4
TRAV13-1A0A0B4J241 MIR1283-1-201ENST00000408494 87 ntBASIC0.05□□□□□ -2.4
TRAV13-1A0A0B4J241 RNA5SP222-201ENST00000411039 105 ntBASIC0.05□□□□□ -2.4
TRAV13-1A0A0B4J241 AL158013.1-202ENST00000419666 520 ntTSL 5 BASIC0.05□□□□□ -2.4
TRAV13-1A0A0B4J241 AC006366.1-201ENST00000422002 759 ntBASIC0.05□□□□□ -2.4
TRAV13-1A0A0B4J241 AC007283.2-201ENST00000424739 197 ntBASIC0.05□□□□□ -2.4
TRAV13-1A0A0B4J241 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC0.05□□□□□ -2.4
TRAV13-1A0A0B4J241 AC000111.3-201ENST00000433478 193 ntBASIC0.05□□□□□ -2.4
TRAV13-1A0A0B4J241 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC0.05□□□□□ -2.4
TRAV13-1A0A0B4J241 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC0.05□□□□□ -2.4
TRAV13-1A0A0B4J241 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC0.05□□□□□ -2.4
TRAV13-1A0A0B4J241 ZNF736P5Y-201ENST00000451173 805 ntBASIC0.05□□□□□ -2.4
TRAV13-1A0A0B4J241 MTCO3P27-201ENST00000514397 196 ntBASIC0.05□□□□□ -2.4
TRAV13-1A0A0B4J241 RNU7-51P-201ENST00000516560 62 ntBASIC0.05□□□□□ -2.4
TRAV13-1A0A0B4J241 AC027419.1-201ENST00000522976 328 ntBASIC0.05□□□□□ -2.4
TRAV13-1A0A0B4J241 AC013828.2-201ENST00000532487 235 ntBASIC0.05□□□□□ -2.4
TRAV13-1A0A0B4J241 AC087894.1-201ENST00000538359 518 ntBASIC0.05□□□□□ -2.4
TRAV13-1A0A0B4J241 SUB1P2-201ENST00000556401 297 ntBASIC0.05□□□□□ -2.4
TRAV13-1A0A0B4J241 AC011195.1-201ENST00000578177 177 ntBASIC0.05□□□□□ -2.4
TRAV13-1A0A0B4J241 AP002360.4-201ENST00000606980 481 ntBASIC0.05□□□□□ -2.4
TRAV13-1A0A0B4J241 AC024060.1-201ENST00000607052 494 ntBASIC0.05□□□□□ -2.4
TRAV13-1A0A0B4J241 AC097478.2-201ENST00000610572 514 ntBASIC0.05□□□□□ -2.4
TRAV13-1A0A0B4J241 AL138726.1-201ENST00000614873 333 ntBASIC0.05□□□□□ -2.4
TRAV13-1A0A0B4J241 AC100810.6-201ENST00000638068 285 ntBASIC0.05□□□□□ -2.4
TRAV13-1A0A0B4J241 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC0.05□□□□□ -2.4
TRAV13-1A0A0B4J241 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.05□□□□□ -2.4
TRAV13-1A0A0B4J241 Y_RNA.46-201ENST00000362695 102 ntBASIC0.04□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 182.2 ms