Protein–RNA interactions for Protein: Q9NPC3

CCNB1IP1, E3 ubiquitin-protein ligase CCNB1IP1, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNB1IP1Q9NPC3 Y_RNA.140-201ENST00000363474 103 ntBASIC1.18□□□□□ -2.22
CCNB1IP1Q9NPC3 SNORA36A-201ENST00000384221 132 ntBASIC1.18□□□□□ -2.22
CCNB1IP1Q9NPC3 MIR194-1-201ENST00000384892 85 ntBASIC1.18□□□□□ -2.22
CCNB1IP1Q9NPC3 RNU6-482P-201ENST00000391068 107 ntBASIC1.18□□□□□ -2.22
CCNB1IP1Q9NPC3 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.18□□□□□ -2.22
CCNB1IP1Q9NPC3 RNU2-7P-201ENST00000410794 178 ntBASIC1.18□□□□□ -2.22
CCNB1IP1Q9NPC3 MTCO2P34-201ENST00000421994 607 ntBASIC1.18□□□□□ -2.22
CCNB1IP1Q9NPC3 CYCSP46-201ENST00000423569 204 ntBASIC1.18□□□□□ -2.22
CCNB1IP1Q9NPC3 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC1.18□□□□□ -2.22
CCNB1IP1Q9NPC3 RNU6-232P-201ENST00000517144 64 ntBASIC1.18□□□□□ -2.22
CCNB1IP1Q9NPC3 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC1.18□□□□□ -2.22
CCNB1IP1Q9NPC3 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC1.18□□□□□ -2.22
CCNB1IP1Q9NPC3 RSL24D1P11-201ENST00000591045 491 ntBASIC1.18□□□□□ -2.22
CCNB1IP1Q9NPC3 MIR3976-201ENST00000606807 139 ntBASIC1.18□□□□□ -2.22
CCNB1IP1Q9NPC3 AC064807.4-201ENST00000607201 407 ntBASIC1.18□□□□□ -2.22
CCNB1IP1Q9NPC3 AL355802.3-201ENST00000607571 545 ntBASIC1.18□□□□□ -2.22
CCNB1IP1Q9NPC3 AP001596.2-201ENST00000608410 312 ntBASIC1.18□□□□□ -2.22
CCNB1IP1Q9NPC3 AL136221.1-201ENST00000621449 509 ntBASIC1.18□□□□□ -2.22
CCNB1IP1Q9NPC3 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.18□□□□□ -2.22
CCNB1IP1Q9NPC3 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC1.17□□□□□ -2.22
CCNB1IP1Q9NPC3 SNORA25.8-201ENST00000364831 128 ntBASIC1.17□□□□□ -2.22
CCNB1IP1Q9NPC3 Y_RNA.399-201ENST00000383955 105 ntBASIC1.17□□□□□ -2.22
CCNB1IP1Q9NPC3 Y_RNA.504-201ENST00000384481 104 ntBASIC1.17□□□□□ -2.22
CCNB1IP1Q9NPC3 MRPL35P1-201ENST00000404272 572 ntBASIC1.17□□□□□ -2.22
CCNB1IP1Q9NPC3 EIF1P1-201ENST00000421436 341 ntBASIC1.17□□□□□ -2.22
CCNB1IP1Q9NPC3 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC1.17□□□□□ -2.22
CCNB1IP1Q9NPC3 RNU7-125P-201ENST00000458760 62 ntBASIC1.17□□□□□ -2.22
CCNB1IP1Q9NPC3 SCARNA18-201ENST00000459004 134 ntBASIC1.17□□□□□ -2.22
CCNB1IP1Q9NPC3 SNORD42A-201ENST00000459584 64 ntBASIC1.17□□□□□ -2.22
CCNB1IP1Q9NPC3 RPL31P58-201ENST00000469001 379 ntBASIC1.17□□□□□ -2.22
CCNB1IP1Q9NPC3 RPS23P5-201ENST00000495419 428 ntBASIC1.17□□□□□ -2.22
CCNB1IP1Q9NPC3 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC1.17□□□□□ -2.22
CCNB1IP1Q9NPC3 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC1.17□□□□□ -2.22
CCNB1IP1Q9NPC3 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC1.17□□□□□ -2.22
CCNB1IP1Q9NPC3 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC1.17□□□□□ -2.22
CCNB1IP1Q9NPC3 AC019288.1-201ENST00000557918 224 ntBASIC1.17□□□□□ -2.22
CCNB1IP1Q9NPC3 AC090517.1-201ENST00000569307 266 ntBASIC1.17□□□□□ -2.22
CCNB1IP1Q9NPC3 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC1.17□□□□□ -2.22
CCNB1IP1Q9NPC3 MIR3941-201ENST00000582572 103 ntBASIC1.17□□□□□ -2.22
CCNB1IP1Q9NPC3 AC245014.2-201ENST00000603689 287 ntBASIC1.17□□□□□ -2.22
CCNB1IP1Q9NPC3 AC064872.1-201ENST00000604823 1072 ntBASIC1.17□□□□□ -2.22
CCNB1IP1Q9NPC3 Z84480.1-201ENST00000605131 311 ntBASIC1.17□□□□□ -2.22
CCNB1IP1Q9NPC3 AC246785.4-201ENST00000605374 287 ntBASIC1.17□□□□□ -2.22
CCNB1IP1Q9NPC3 AL353149.1-201ENST00000610667 244 ntBASIC1.17□□□□□ -2.22
CCNB1IP1Q9NPC3 MTND5P35-201ENST00000557537 1720 ntBASIC1.17□□□□□ -2.22
CCNB1IP1Q9NPC3 RNU1-96P-201ENST00000364163 162 ntBASIC1.16□□□□□ -2.22
CCNB1IP1Q9NPC3 RNU5A-2P-201ENST00000384337 116 ntBASIC1.16□□□□□ -2.22
CCNB1IP1Q9NPC3 RNU6-1026P-201ENST00000384465 108 ntBASIC1.16□□□□□ -2.22
CCNB1IP1Q9NPC3 RNU6-297P-201ENST00000384636 107 ntBASIC1.16□□□□□ -2.22
CCNB1IP1Q9NPC3 SNORA17.3-201ENST00000391159 129 ntBASIC1.16□□□□□ -2.22
CCNB1IP1Q9NPC3 RNU4-62P-201ENST00000410125 130 ntBASIC1.16□□□□□ -2.22
CCNB1IP1Q9NPC3 AP000275.1-201ENST00000411943 390 ntBASIC1.16□□□□□ -2.22
CCNB1IP1Q9NPC3 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC1.16□□□□□ -2.22
CCNB1IP1Q9NPC3 AC010099.3-201ENST00000423896 409 ntBASIC1.16□□□□□ -2.22
CCNB1IP1Q9NPC3 AC108667.1-201ENST00000428618 249 ntBASIC1.16□□□□□ -2.22
CCNB1IP1Q9NPC3 MTCO3P29-201ENST00000432119 779 ntBASIC1.16□□□□□ -2.22
CCNB1IP1Q9NPC3 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC1.16□□□□□ -2.22
CCNB1IP1Q9NPC3 AC022364.2-201ENST00000457963 554 ntBASIC1.16□□□□□ -2.22
CCNB1IP1Q9NPC3 RNU1-123P-201ENST00000458950 160 ntBASIC1.16□□□□□ -2.22
CCNB1IP1Q9NPC3 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC1.16□□□□□ -2.22
CCNB1IP1Q9NPC3 AC067942.3-201ENST00000512025 362 ntBASIC1.16□□□□□ -2.22
CCNB1IP1Q9NPC3 AC019176.1-201ENST00000518519 225 ntBASIC1.16□□□□□ -2.22
CCNB1IP1Q9NPC3 AC090821.2-201ENST00000523552 176 ntBASIC1.16□□□□□ -2.22
CCNB1IP1Q9NPC3 AC008015.1-201ENST00000555505 465 ntBASIC1.16□□□□□ -2.22
CCNB1IP1Q9NPC3 SNORA59B-202ENST00000578183 701 ntBASIC1.16□□□□□ -2.22
CCNB1IP1Q9NPC3 MESTIT1_1.1-201ENST00000618871 140 ntBASIC1.16□□□□□ -2.22
CCNB1IP1Q9NPC3 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.16□□□□□ -2.22
CCNB1IP1Q9NPC3 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.15□□□□□ -2.22
CCNB1IP1Q9NPC3 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC1.15□□□□□ -2.23
CCNB1IP1Q9NPC3 RNU6-606P-201ENST00000384721 111 ntBASIC1.15□□□□□ -2.23
CCNB1IP1Q9NPC3 MIR618-201ENST00000385287 98 ntBASIC1.15□□□□□ -2.23
CCNB1IP1Q9NPC3 MIR208B-201ENST00000401172 77 ntBASIC1.15□□□□□ -2.23
CCNB1IP1Q9NPC3 MIR1285-1-201ENST00000408593 84 ntBASIC1.15□□□□□ -2.23
CCNB1IP1Q9NPC3 AC012306.1-201ENST00000423267 114 ntBASIC1.15□□□□□ -2.23
CCNB1IP1Q9NPC3 AC069257.2-201ENST00000441819 155 ntBASIC1.15□□□□□ -2.23
CCNB1IP1Q9NPC3 MTCYBP18-201ENST00000501056 747 ntBASIC1.15□□□□□ -2.23
CCNB1IP1Q9NPC3 RNU6-759P-201ENST00000516740 103 ntBASIC1.15□□□□□ -2.23
CCNB1IP1Q9NPC3 MIR4421-201ENST00000578133 69 ntBASIC1.15□□□□□ -2.23
CCNB1IP1Q9NPC3 AP005136.1-201ENST00000579765 429 ntBASIC1.15□□□□□ -2.23
CCNB1IP1Q9NPC3 MIR3937-201ENST00000580135 106 ntBASIC1.15□□□□□ -2.23
CCNB1IP1Q9NPC3 AC024933.1-201ENST00000608472 348 ntBASIC1.15□□□□□ -2.23
CCNB1IP1Q9NPC3 AC122133.1-201ENST00000613964 233 ntBASIC1.15□□□□□ -2.23
CCNB1IP1Q9NPC3 AF246928.1-201ENST00000623768 87 ntBASIC1.15□□□□□ -2.23
CCNB1IP1Q9NPC3 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.15□□□□□ -2.23
CCNB1IP1Q9NPC3 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC1.15□□□□□ -2.23
CCNB1IP1Q9NPC3 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.14□□□□□ -2.23
CCNB1IP1Q9NPC3 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC1.14□□□□□ -2.23
CCNB1IP1Q9NPC3 RNU4-21P-201ENST00000362802 126 ntBASIC1.14□□□□□ -2.23
CCNB1IP1Q9NPC3 Y_RNA.132-201ENST00000363421 102 ntBASIC1.14□□□□□ -2.23
CCNB1IP1Q9NPC3 SNORA7.1-201ENST00000363750 139 ntBASIC1.14□□□□□ -2.23
CCNB1IP1Q9NPC3 RNU6-282P-201ENST00000365357 103 ntBASIC1.14□□□□□ -2.23
CCNB1IP1Q9NPC3 RNU6-248P-201ENST00000410720 107 ntBASIC1.14□□□□□ -2.23
CCNB1IP1Q9NPC3 RPL37P10-201ENST00000412884 288 ntBASIC1.14□□□□□ -2.23
CCNB1IP1Q9NPC3 AC060773.1-201ENST00000421698 310 ntBASIC1.14□□□□□ -2.23
CCNB1IP1Q9NPC3 CST2P1-201ENST00000425770 87 ntBASIC1.14□□□□□ -2.23
CCNB1IP1Q9NPC3 USP9YP28-201ENST00000435142 589 ntBASIC1.14□□□□□ -2.23
CCNB1IP1Q9NPC3 snoU13.27-201ENST00000459278 104 ntBASIC1.14□□□□□ -2.23
CCNB1IP1Q9NPC3 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC1.14□□□□□ -2.23
CCNB1IP1Q9NPC3 AL163973.1-201ENST00000484753 577 ntBASIC1.14□□□□□ -2.23
CCNB1IP1Q9NPC3 RNU6-1041P-201ENST00000516254 102 ntBASIC1.14□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 235 ms