Protein–RNA interactions for Protein: Q9BYR8

KRTAP3-1, Keratin-associated protein 3-1, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-1Q9BYR8 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
KRTAP3-1Q9BYR8 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC2.43□□□□□ -2.02
KRTAP3-1Q9BYR8 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC2.43□□□□□ -2.02
KRTAP3-1Q9BYR8 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
KRTAP3-1Q9BYR8 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC2.43□□□□□ -2.02
KRTAP3-1Q9BYR8 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC2.43□□□□□ -2.02
KRTAP3-1Q9BYR8 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC2.43□□□□□ -2.02
KRTAP3-1Q9BYR8 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC2.43□□□□□ -2.02
KRTAP3-1Q9BYR8 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC2.43□□□□□ -2.02
KRTAP3-1Q9BYR8 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC2.42□□□□□ -2.02
KRTAP3-1Q9BYR8 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC2.42□□□□□ -2.02
KRTAP3-1Q9BYR8 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
KRTAP3-1Q9BYR8 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC2.42□□□□□ -2.02
KRTAP3-1Q9BYR8 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
KRTAP3-1Q9BYR8 Y_RNA.17-201ENST00000362433 111 ntBASIC2.42□□□□□ -2.02
KRTAP3-1Q9BYR8 RNU6-228P-201ENST00000362700 106 ntBASIC2.42□□□□□ -2.02
KRTAP3-1Q9BYR8 RNU1-96P-201ENST00000364163 162 ntBASIC2.42□□□□□ -2.02
KRTAP3-1Q9BYR8 RNU6-813P-201ENST00000384691 107 ntBASIC2.42□□□□□ -2.02
KRTAP3-1Q9BYR8 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC2.42□□□□□ -2.02
KRTAP3-1Q9BYR8 RNA5SP372-201ENST00000390836 115 ntBASIC2.42□□□□□ -2.02
KRTAP3-1Q9BYR8 MIR921-201ENST00000401133 56 ntBASIC2.42□□□□□ -2.02
KRTAP3-1Q9BYR8 RNA5SP146-201ENST00000410743 123 ntBASIC2.42□□□□□ -2.02
KRTAP3-1Q9BYR8 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC2.42□□□□□ -2.02
KRTAP3-1Q9BYR8 AC010401.1-201ENST00000463867 348 ntBASIC2.42□□□□□ -2.02
KRTAP3-1Q9BYR8 RN7SL174P-201ENST00000475578 289 ntBASIC2.42□□□□□ -2.02
KRTAP3-1Q9BYR8 RN7SL244P-201ENST00000493405 297 ntBASIC2.42□□□□□ -2.02
KRTAP3-1Q9BYR8 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC2.42□□□□□ -2.02
KRTAP3-1Q9BYR8 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC2.42□□□□□ -2.02
KRTAP3-1Q9BYR8 RNU6ATAC12P-201ENST00000516542 115 ntBASIC2.42□□□□□ -2.02
KRTAP3-1Q9BYR8 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC2.42□□□□□ -2.02
KRTAP3-1Q9BYR8 FAM71BP1-201ENST00000604431 523 ntBASIC2.42□□□□□ -2.02
KRTAP3-1Q9BYR8 AL121932.1-201ENST00000605542 214 ntBASIC2.42□□□□□ -2.02
KRTAP3-1Q9BYR8 U2.20-201ENST00000613956 192 ntBASIC2.42□□□□□ -2.02
KRTAP3-1Q9BYR8 MIR1248-201ENST00000629190 106 ntBASIC2.42□□□□□ -2.02
KRTAP3-1Q9BYR8 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC2.42□□□□□ -2.02
KRTAP3-1Q9BYR8 MIR1910-201ENST00000636955 80 ntBASIC2.42□□□□□ -2.02
KRTAP3-1Q9BYR8 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
KRTAP3-1Q9BYR8 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
KRTAP3-1Q9BYR8 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC2.42□□□□□ -2.02
KRTAP3-1Q9BYR8 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC2.42□□□□□ -2.02
KRTAP3-1Q9BYR8 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
KRTAP3-1Q9BYR8 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC2.42□□□□□ -2.02
KRTAP3-1Q9BYR8 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC2.42□□□□□ -2.02
KRTAP3-1Q9BYR8 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC2.42□□□□□ -2.02
KRTAP3-1Q9BYR8 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC2.42□□□□□ -2.02
KRTAP3-1Q9BYR8 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC2.42□□□□□ -2.02
KRTAP3-1Q9BYR8 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC2.42□□□□□ -2.02
KRTAP3-1Q9BYR8 Z95331.1-201ENST00000623075 23112 ntBASIC2.42□□□□□ -2.02
KRTAP3-1Q9BYR8 ANGPT2-201ENST00000325203 5416 ntAPPRIS P3 TSL 1 (best) BASIC2.42□□□□□ -2.02
KRTAP3-1Q9BYR8 SUPT16HP1-201ENST00000537175 3133 ntBASIC2.42□□□□□ -2.02
KRTAP3-1Q9BYR8 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC2.42□□□□□ -2.02
KRTAP3-1Q9BYR8 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC2.41□□□□□ -2.02
KRTAP3-1Q9BYR8 CDC42SE2-201ENST00000360515 3591 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
KRTAP3-1Q9BYR8 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
KRTAP3-1Q9BYR8 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
KRTAP3-1Q9BYR8 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC2.41□□□□□ -2.02
KRTAP3-1Q9BYR8 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC2.41□□□□□ -2.02
KRTAP3-1Q9BYR8 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
KRTAP3-1Q9BYR8 RNU1-94P-201ENST00000362627 173 ntBASIC2.41□□□□□ -2.02
KRTAP3-1Q9BYR8 Y_RNA.267-201ENST00000364679 109 ntBASIC2.41□□□□□ -2.02
KRTAP3-1Q9BYR8 RNA5SP132-201ENST00000364725 118 ntBASIC2.41□□□□□ -2.02
KRTAP3-1Q9BYR8 RNA5SP428-201ENST00000365129 132 ntBASIC2.41□□□□□ -2.02
KRTAP3-1Q9BYR8 RNU6-242P-201ENST00000384359 107 ntBASIC2.41□□□□□ -2.02
KRTAP3-1Q9BYR8 HDGFP1-201ENST00000405943 252 ntBASIC2.41□□□□□ -2.02
KRTAP3-1Q9BYR8 RNA5SP225-201ENST00000410874 135 ntBASIC2.41□□□□□ -2.02
KRTAP3-1Q9BYR8 AC114755.2-201ENST00000413520 361 ntBASIC2.41□□□□□ -2.02
KRTAP3-1Q9BYR8 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC2.41□□□□□ -2.02
KRTAP3-1Q9BYR8 AC244505.4-201ENST00000434905 287 ntBASIC2.41□□□□□ -2.02
KRTAP3-1Q9BYR8 AL445687.1-201ENST00000439946 251 ntBASIC2.41□□□□□ -2.02
KRTAP3-1Q9BYR8 SSXP5-201ENST00000443473 287 ntBASIC2.41□□□□□ -2.02
KRTAP3-1Q9BYR8 RNU1-131P-201ENST00000458943 161 ntBASIC2.41□□□□□ -2.02
KRTAP3-1Q9BYR8 AL592156.1-201ENST00000508758 304 ntBASIC2.41□□□□□ -2.02
KRTAP3-1Q9BYR8 BX510359.5-201ENST00000515651 304 ntBASIC2.41□□□□□ -2.02
KRTAP3-1Q9BYR8 RNU6-341P-201ENST00000516973 96 ntBASIC2.41□□□□□ -2.02
KRTAP3-1Q9BYR8 AC134698.5-201ENST00000519444 336 ntBASIC2.41□□□□□ -2.02
KRTAP3-1Q9BYR8 IGKV3D-34-201ENST00000522638 302 ntBASIC2.41□□□□□ -2.02
KRTAP3-1Q9BYR8 AC062004.1-202ENST00000524014 246 ntTSL 5 BASIC2.41□□□□□ -2.02
KRTAP3-1Q9BYR8 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC2.41□□□□□ -2.02
KRTAP3-1Q9BYR8 MIR4778-201ENST00000577635 80 ntBASIC2.41□□□□□ -2.02
KRTAP3-1Q9BYR8 AC131274.1-201ENST00000582507 254 ntTSL 3 BASIC2.41□□□□□ -2.02
KRTAP3-1Q9BYR8 MIR4305-201ENST00000583252 102 ntBASIC2.41□□□□□ -2.02
KRTAP3-1Q9BYR8 AC244100.4-201ENST00000617747 388 ntBASIC2.41□□□□□ -2.02
KRTAP3-1Q9BYR8 AC019206.1-201ENST00000621938 425 ntBASIC2.41□□□□□ -2.02
KRTAP3-1Q9BYR8 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC2.41□□□□□ -2.02
KRTAP3-1Q9BYR8 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
KRTAP3-1Q9BYR8 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC2.41□□□□□ -2.02
KRTAP3-1Q9BYR8 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
KRTAP3-1Q9BYR8 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
KRTAP3-1Q9BYR8 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC2.41□□□□□ -2.02
KRTAP3-1Q9BYR8 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC2.41□□□□□ -2.02
KRTAP3-1Q9BYR8 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC2.41□□□□□ -2.02
KRTAP3-1Q9BYR8 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC2.41□□□□□ -2.02
KRTAP3-1Q9BYR8 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
KRTAP3-1Q9BYR8 BRAFP1-201ENST00000445336 2703 ntBASIC2.4□□□□□ -2.02
KRTAP3-1Q9BYR8 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC2.4□□□□□ -2.02
KRTAP3-1Q9BYR8 AL031595.2-201ENST00000624215 19071 ntBASIC2.4□□□□□ -2.02
KRTAP3-1Q9BYR8 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC2.4□□□□□ -2.02
KRTAP3-1Q9BYR8 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC2.4□□□□□ -2.02
KRTAP3-1Q9BYR8 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC2.4□□□□□ -2.03
KRTAP3-1Q9BYR8 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 167.6 ms