Protein–RNA interactions for Protein: Q96T60

PNKP, Bifunctional polynucleotide phosphatase/kinase, humanhuman

Predictions only

Length 521 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PNKPQ96T60 RPL39P29-201ENST00000447779 157 ntBASIC3.11□□□□□ -1.91
PNKPQ96T60 RPL23AP94-201ENST00000512518 302 ntBASIC3.11□□□□□ -1.91
PNKPQ96T60 CKS1BP7-201ENST00000522230 235 ntBASIC3.11□□□□□ -1.91
PNKPQ96T60 HSPE1P20-201ENST00000538133 289 ntBASIC3.11□□□□□ -1.91
PNKPQ96T60 AP002770.2-201ENST00000543613 532 ntBASIC3.11□□□□□ -1.91
PNKPQ96T60 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.11□□□□□ -1.91
PNKPQ96T60 AC090617.3-201ENST00000573670 475 ntBASIC3.11□□□□□ -1.91
PNKPQ96T60 AC090897.2-201ENST00000581715 130 ntBASIC3.11□□□□□ -1.91
PNKPQ96T60 AL356157.2-201ENST00000605122 111 ntBASIC3.11□□□□□ -1.91
PNKPQ96T60 U6.92-201ENST00000636464 89 ntBASIC3.11□□□□□ -1.91
PNKPQ96T60 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
PNKPQ96T60 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
PNKPQ96T60 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
PNKPQ96T60 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.1□□□□□ -1.91
PNKPQ96T60 AL161431.1-201ENST00000618966 4205 ntBASIC3.1□□□□□ -1.91
PNKPQ96T60 FAM35CP-201ENST00000554755 2470 ntBASIC3.1□□□□□ -1.91
PNKPQ96T60 RNU1-35P-201ENST00000362782 153 ntBASIC3.1□□□□□ -1.91
PNKPQ96T60 RNU6-1141P-201ENST00000364520 107 ntBASIC3.1□□□□□ -1.91
PNKPQ96T60 Y_RNA.307-201ENST00000365022 117 ntBASIC3.1□□□□□ -1.91
PNKPQ96T60 Y_RNA.376-201ENST00000365638 108 ntBASIC3.1□□□□□ -1.91
PNKPQ96T60 MIR487A-201ENST00000385009 80 ntBASIC3.1□□□□□ -1.91
PNKPQ96T60 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC3.1□□□□□ -1.91
PNKPQ96T60 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC3.1□□□□□ -1.91
PNKPQ96T60 AC103975.1-201ENST00000482506 483 ntBASIC3.1□□□□□ -1.91
PNKPQ96T60 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC3.1□□□□□ -1.91
PNKPQ96T60 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC3.1□□□□□ -1.91
PNKPQ96T60 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC3.1□□□□□ -1.91
PNKPQ96T60 AC022868.1-201ENST00000517767 391 ntBASIC3.1□□□□□ -1.91
PNKPQ96T60 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC3.1□□□□□ -1.91
PNKPQ96T60 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC3.1□□□□□ -1.91
PNKPQ96T60 AC091152.3-201ENST00000604227 325 ntBASIC3.1□□□□□ -1.91
PNKPQ96T60 AC062037.2-201ENST00000610137 73 ntBASIC3.1□□□□□ -1.91
PNKPQ96T60 RMST_6.1-201ENST00000611980 203 ntBASIC3.1□□□□□ -1.91
PNKPQ96T60 AC130454.1-201ENST00000622948 401 ntBASIC3.1□□□□□ -1.91
PNKPQ96T60 AL450472.1-202ENST00000637286 180 ntBASIC3.1□□□□□ -1.91
PNKPQ96T60 AL035425.3-201ENST00000564206 4996 ntBASIC3.1□□□□□ -1.91
PNKPQ96T60 AC009487.2-201ENST00000420969 6821 ntBASIC3.1□□□□□ -1.91
PNKPQ96T60 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC3.1□□□□□ -1.91
PNKPQ96T60 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC3.09□□□□□ -1.91
PNKPQ96T60 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
PNKPQ96T60 AP003122.5-201ENST00000527668 3766 ntBASIC3.09□□□□□ -1.91
PNKPQ96T60 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC3.09□□□□□ -1.91
PNKPQ96T60 RNA5SP295-201ENST00000362655 121 ntBASIC3.09□□□□□ -1.91
PNKPQ96T60 SNORD115-32-201ENST00000364079 82 ntBASIC3.09□□□□□ -1.91
PNKPQ96T60 RNU6-1318P-201ENST00000365389 103 ntBASIC3.09□□□□□ -1.91
PNKPQ96T60 RNU6-611P-201ENST00000384276 104 ntBASIC3.09□□□□□ -1.91
PNKPQ96T60 Y_RNA.483-201ENST00000384380 101 ntBASIC3.09□□□□□ -1.91
PNKPQ96T60 RNU6-19P-201ENST00000384718 107 ntBASIC3.09□□□□□ -1.91
PNKPQ96T60 MIR887-201ENST00000401258 79 ntBASIC3.09□□□□□ -1.91
PNKPQ96T60 RNU6-121P-201ENST00000410525 99 ntBASIC3.09□□□□□ -1.91
PNKPQ96T60 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC3.09□□□□□ -1.91
PNKPQ96T60 PTGES3P4-201ENST00000426243 356 ntBASIC3.09□□□□□ -1.91
PNKPQ96T60 AL139132.1-201ENST00000431587 344 ntBASIC3.09□□□□□ -1.91
PNKPQ96T60 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC3.09□□□□□ -1.91
PNKPQ96T60 AC244670.1-201ENST00000436879 112 ntBASIC3.09□□□□□ -1.91
PNKPQ96T60 LINC01399-202ENST00000458450 244 ntBASIC3.09□□□□□ -1.91
PNKPQ96T60 RNU7-23P-201ENST00000459465 62 ntBASIC3.09□□□□□ -1.91
PNKPQ96T60 AP000870.1-201ENST00000472927 406 ntBASIC3.09□□□□□ -1.91
PNKPQ96T60 AC083906.5-201ENST00000503722 328 ntBASIC3.09□□□□□ -1.91
PNKPQ96T60 AC016632.1-201ENST00000503994 196 ntBASIC3.09□□□□□ -1.91
PNKPQ96T60 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC3.09□□□□□ -1.91
PNKPQ96T60 MIR5571-201ENST00000577998 113 ntBASIC3.09□□□□□ -1.91
PNKPQ96T60 AL359198.2-201ENST00000611836 194 ntBASIC3.09□□□□□ -1.91
PNKPQ96T60 AC006111.3-201ENST00000622137 383 ntBASIC3.09□□□□□ -1.91
PNKPQ96T60 OFD1P6Y-202ENST00000451061 2724 ntBASIC3.09□□□□□ -1.92
PNKPQ96T60 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC3.09□□□□□ -1.92
PNKPQ96T60 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC3.09□□□□□ -1.92
PNKPQ96T60 HAUS6P2-201ENST00000433254 2404 ntBASIC3.09□□□□□ -1.92
PNKPQ96T60 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.92
PNKPQ96T60 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
PNKPQ96T60 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
PNKPQ96T60 RNU6-1301P-201ENST00000362724 104 ntBASIC3.08□□□□□ -1.92
PNKPQ96T60 RNY3P4-201ENST00000384428 101 ntBASIC3.08□□□□□ -1.92
PNKPQ96T60 MIR153-2-201ENST00000385225 87 ntBASIC3.08□□□□□ -1.92
PNKPQ96T60 MIR1302-6-201ENST00000408466 90 ntBASIC3.08□□□□□ -1.92
PNKPQ96T60 RNA5SP390-201ENST00000410191 113 ntBASIC3.08□□□□□ -1.92
PNKPQ96T60 RN7SKP61-201ENST00000410642 295 ntBASIC3.08□□□□□ -1.92
PNKPQ96T60 RPL21P38-201ENST00000418090 167 ntBASIC3.08□□□□□ -1.92
PNKPQ96T60 TRAPPC2P8-201ENST00000440676 396 ntBASIC3.08□□□□□ -1.92
PNKPQ96T60 AL031183.1-201ENST00000457667 207 ntBASIC3.08□□□□□ -1.92
PNKPQ96T60 snoU13.6-201ENST00000458785 104 ntBASIC3.08□□□□□ -1.92
PNKPQ96T60 RPS29P26-201ENST00000477483 171 ntBASIC3.08□□□□□ -1.92
PNKPQ96T60 AC098869.1-201ENST00000481627 292 ntBASIC3.08□□□□□ -1.92
PNKPQ96T60 AC067942.3-201ENST00000512025 362 ntBASIC3.08□□□□□ -1.92
PNKPQ96T60 RNU6-408P-201ENST00000515910 100 ntBASIC3.08□□□□□ -1.92
PNKPQ96T60 MIR2355-201ENST00000517199 87 ntBASIC3.08□□□□□ -1.92
PNKPQ96T60 AC107016.2-201ENST00000547968 190 ntBASIC3.08□□□□□ -1.92
PNKPQ96T60 HOTTIP_4.1-201ENST00000618195 165 ntBASIC3.08□□□□□ -1.92
PNKPQ96T60 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC3.07□□□□□ -1.92
PNKPQ96T60 AC010680.1-201ENST00000590024 3590 ntBASIC3.07□□□□□ -1.92
PNKPQ96T60 OR56A5-201ENST00000340110 738 ntBASIC3.07□□□□□ -1.92
PNKPQ96T60 RNU6-1285P-201ENST00000363480 105 ntBASIC3.07□□□□□ -1.92
PNKPQ96T60 Y_RNA.183-201ENST00000363882 113 ntBASIC3.07□□□□□ -1.92
PNKPQ96T60 Y_RNA.288-201ENST00000364854 92 ntBASIC3.07□□□□□ -1.92
PNKPQ96T60 RNU6-487P-201ENST00000365430 104 ntBASIC3.07□□□□□ -1.92
PNKPQ96T60 U8.10-201ENST00000384260 133 ntBASIC3.07□□□□□ -1.92
PNKPQ96T60 Y_RNA.476-201ENST00000384347 108 ntBASIC3.07□□□□□ -1.92
PNKPQ96T60 AC078809.1-201ENST00000427601 140 ntBASIC3.07□□□□□ -1.92
PNKPQ96T60 AL445305.1-201ENST00000432577 575 ntBASIC3.07□□□□□ -1.92
PNKPQ96T60 AC107626.1-201ENST00000471084 183 ntBASIC3.07□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 222.6 ms