Protein–RNA interactions for Protein: Q96DD0

LRRC39, Leucine-rich repeat-containing protein 39, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC39Q96DD0 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC0.93□□□□□ -2.26
LRRC39Q96DD0 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC0.93□□□□□ -2.26
LRRC39Q96DD0 AC080078.3-201ENST00000605407 463 ntBASIC0.93□□□□□ -2.26
LRRC39Q96DD0 AL020996.3-201ENST00000606617 222 ntBASIC0.93□□□□□ -2.26
LRRC39Q96DD0 AC009994.1-201ENST00000606889 253 ntBASIC0.93□□□□□ -2.26
LRRC39Q96DD0 AL021879.1-201ENST00000611756 288 ntBASIC0.93□□□□□ -2.26
LRRC39Q96DD0 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC0.93□□□□□ -2.26
LRRC39Q96DD0 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC0.93□□□□□ -2.26
LRRC39Q96DD0 RNU6-534P-201ENST00000364877 106 ntBASIC0.92□□□□□ -2.26
LRRC39Q96DD0 SNORA4.2-201ENST00000365313 147 ntBASIC0.92□□□□□ -2.26
LRRC39Q96DD0 Y_RNA.480-201ENST00000384364 102 ntBASIC0.92□□□□□ -2.26
LRRC39Q96DD0 AL356776.1-201ENST00000406574 447 ntBASIC0.92□□□□□ -2.26
LRRC39Q96DD0 MTATP6P16-201ENST00000434543 526 ntBASIC0.92□□□□□ -2.26
LRRC39Q96DD0 GAPDHP17-201ENST00000449858 1001 ntBASIC0.92□□□□□ -2.26
LRRC39Q96DD0 RPS27P1-201ENST00000450552 247 ntBASIC0.92□□□□□ -2.26
LRRC39Q96DD0 AL163973.1-201ENST00000484753 577 ntBASIC0.92□□□□□ -2.26
LRRC39Q96DD0 AC022878.1-201ENST00000530684 149 ntBASIC0.92□□□□□ -2.26
LRRC39Q96DD0 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC0.92□□□□□ -2.26
LRRC39Q96DD0 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC0.92□□□□□ -2.26
LRRC39Q96DD0 TMF1P1-201ENST00000576058 373 ntBASIC0.92□□□□□ -2.26
LRRC39Q96DD0 MIR4781-201ENST00000585250 76 ntBASIC0.92□□□□□ -2.26
LRRC39Q96DD0 AC091805.2-201ENST00000603848 235 ntBASIC0.92□□□□□ -2.26
LRRC39Q96DD0 AC126177.8-201ENST00000618339 1015 ntBASIC0.92□□□□□ -2.26
LRRC39Q96DD0 U6.114-201ENST00000636407 96 ntBASIC0.92□□□□□ -2.26
LRRC39Q96DD0 MTND4P9-201ENST00000507819 1346 ntBASIC0.91□□□□□ -2.26
LRRC39Q96DD0 RNU6-552P-201ENST00000362869 119 ntBASIC0.91□□□□□ -2.26
LRRC39Q96DD0 RNU6-116P-201ENST00000384042 109 ntBASIC0.91□□□□□ -2.26
LRRC39Q96DD0 RNU6-950P-201ENST00000384651 107 ntBASIC0.91□□□□□ -2.26
LRRC39Q96DD0 MIR532-201ENST00000385025 91 ntBASIC0.91□□□□□ -2.26
LRRC39Q96DD0 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC0.91□□□□□ -2.26
LRRC39Q96DD0 MTND1P18-201ENST00000448191 573 ntBASIC0.91□□□□□ -2.26
LRRC39Q96DD0 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC0.91□□□□□ -2.26
LRRC39Q96DD0 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC0.91□□□□□ -2.26
LRRC39Q96DD0 SCARNA16.2-201ENST00000516520 172 ntBASIC0.91□□□□□ -2.26
LRRC39Q96DD0 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC0.91□□□□□ -2.26
LRRC39Q96DD0 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC0.91□□□□□ -2.26
LRRC39Q96DD0 AC078795.3-201ENST00000602913 472 ntBASIC0.91□□□□□ -2.26
LRRC39Q96DD0 CTHRC1P1-201ENST00000605383 469 ntBASIC0.91□□□□□ -2.26
LRRC39Q96DD0 RNU6-562P-201ENST00000362731 107 ntBASIC0.9□□□□□ -2.27
LRRC39Q96DD0 RNU1-36P-201ENST00000365130 165 ntBASIC0.9□□□□□ -2.27
LRRC39Q96DD0 SNORA20.2-201ENST00000383922 131 ntBASIC0.9□□□□□ -2.27
LRRC39Q96DD0 RNU6-378P-201ENST00000384324 107 ntBASIC0.9□□□□□ -2.27
LRRC39Q96DD0 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC0.9□□□□□ -2.27
LRRC39Q96DD0 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC0.9□□□□□ -2.27
LRRC39Q96DD0 AL512286.1-201ENST00000439244 400 ntBASIC0.9□□□□□ -2.27
LRRC39Q96DD0 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC0.9□□□□□ -2.27
LRRC39Q96DD0 RNU7-34P-201ENST00000459394 64 ntBASIC0.9□□□□□ -2.27
LRRC39Q96DD0 AC008628.2-201ENST00000502605 298 ntBASIC0.9□□□□□ -2.27
LRRC39Q96DD0 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC0.9□□□□□ -2.27
LRRC39Q96DD0 NAF1-205ENST00000509434 385 ntTSL 3 BASIC0.9□□□□□ -2.27
LRRC39Q96DD0 AF131216.2-201ENST00000512316 564 ntBASIC0.9□□□□□ -2.27
LRRC39Q96DD0 AC011406.1-201ENST00000512440 370 ntBASIC0.9□□□□□ -2.27
LRRC39Q96DD0 LRRC34P2-201ENST00000514850 553 ntBASIC0.9□□□□□ -2.27
LRRC39Q96DD0 RNA5SP384-201ENST00000516615 116 ntBASIC0.9□□□□□ -2.27
LRRC39Q96DD0 SNORA70.22-201ENST00000517160 124 ntBASIC0.9□□□□□ -2.27
LRRC39Q96DD0 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC0.9□□□□□ -2.27
LRRC39Q96DD0 AC112191.3-201ENST00000604371 277 ntBASIC0.9□□□□□ -2.27
LRRC39Q96DD0 Z98751.3-201ENST00000604447 521 ntBASIC0.9□□□□□ -2.27
LRRC39Q96DD0 AL121992.2-201ENST00000606262 256 ntBASIC0.9□□□□□ -2.27
LRRC39Q96DD0 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC0.9□□□□□ -2.27
LRRC39Q96DD0 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC0.9□□□□□ -2.27
LRRC39Q96DD0 uc_338.11-201ENST00000619132 160 ntBASIC0.9□□□□□ -2.27
LRRC39Q96DD0 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC0.89□□□□□ -2.27
LRRC39Q96DD0 Y_RNA.4-201ENST00000362333 112 ntBASIC0.89□□□□□ -2.27
LRRC39Q96DD0 RNU6-428P-201ENST00000362942 107 ntBASIC0.89□□□□□ -2.27
LRRC39Q96DD0 SNORD113-6-201ENST00000363345 75 ntBASIC0.89□□□□□ -2.27
LRRC39Q96DD0 Y_RNA.164-201ENST00000363709 102 ntBASIC0.89□□□□□ -2.27
LRRC39Q96DD0 RNU6-550P-201ENST00000391057 101 ntBASIC0.89□□□□□ -2.27
LRRC39Q96DD0 CDK8P2-201ENST00000415020 547 ntBASIC0.89□□□□□ -2.27
LRRC39Q96DD0 AL117339.3-201ENST00000418733 162 ntBASIC0.89□□□□□ -2.27
LRRC39Q96DD0 AC060773.1-201ENST00000421698 310 ntBASIC0.89□□□□□ -2.27
LRRC39Q96DD0 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC0.89□□□□□ -2.27
LRRC39Q96DD0 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC0.89□□□□□ -2.27
LRRC39Q96DD0 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC0.89□□□□□ -2.27
LRRC39Q96DD0 AC091951.3-201ENST00000504093 246 ntBASIC0.89□□□□□ -2.27
LRRC39Q96DD0 ARL2BPP4-201ENST00000506854 471 ntBASIC0.89□□□□□ -2.27
LRRC39Q96DD0 AP003072.2-201ENST00000527756 676 ntBASIC0.89□□□□□ -2.27
LRRC39Q96DD0 AC090517.1-201ENST00000569307 266 ntBASIC0.89□□□□□ -2.27
LRRC39Q96DD0 MIR3941-201ENST00000582572 103 ntBASIC0.89□□□□□ -2.27
LRRC39Q96DD0 AC211469.2-201ENST00000605461 205 ntBASIC0.89□□□□□ -2.27
LRRC39Q96DD0 AC008250.2-201ENST00000615261 205 ntBASIC0.89□□□□□ -2.27
LRRC39Q96DD0 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC0.89□□□□□ -2.27
LRRC39Q96DD0 AC099654.13-201ENST00000639774 207 ntBASIC0.89□□□□□ -2.27
LRRC39Q96DD0 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC0.88□□□□□ -2.27
LRRC39Q96DD0 RNU6-500P-201ENST00000362349 107 ntBASIC0.88□□□□□ -2.27
LRRC39Q96DD0 RNU6-1287P-201ENST00000362914 107 ntBASIC0.88□□□□□ -2.27
LRRC39Q96DD0 RNU6-715P-201ENST00000365204 103 ntBASIC0.88□□□□□ -2.27
LRRC39Q96DD0 RNU6-1060P-201ENST00000384664 107 ntBASIC0.88□□□□□ -2.27
LRRC39Q96DD0 MIR19B1-201ENST00000384829 87 ntBASIC0.88□□□□□ -2.27
LRRC39Q96DD0 AC010099.3-201ENST00000423896 409 ntBASIC0.88□□□□□ -2.27
LRRC39Q96DD0 ISCA1P6-201ENST00000427740 390 ntBASIC0.88□□□□□ -2.27
LRRC39Q96DD0 GTF2IP13-201ENST00000438487 386 ntBASIC0.88□□□□□ -2.27
LRRC39Q96DD0 AC079781.2-201ENST00000446424 169 ntBASIC0.88□□□□□ -2.27
LRRC39Q96DD0 RPL39P38-201ENST00000467018 153 ntBASIC0.88□□□□□ -2.27
LRRC39Q96DD0 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC0.88□□□□□ -2.27
LRRC39Q96DD0 ACA64.5-201ENST00000516207 127 ntBASIC0.88□□□□□ -2.27
LRRC39Q96DD0 RNU6-1146P-201ENST00000516282 102 ntBASIC0.88□□□□□ -2.27
LRRC39Q96DD0 SCARNA24.1-201ENST00000516465 137 ntBASIC0.88□□□□□ -2.27
LRRC39Q96DD0 AC024995.1-201ENST00000523014 93 ntBASIC0.88□□□□□ -2.27
LRRC39Q96DD0 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC0.88□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 265.8 ms