Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC3.99□□□□□ -1.77
NFKB1P19838 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC3.99□□□□□ -1.77
NFKB1P19838 SNORD19.2-201ENST00000516978 73 ntBASIC3.99□□□□□ -1.77
NFKB1P19838 IGKV2D-19-201ENST00000523346 262 ntBASIC3.99□□□□□ -1.77
NFKB1P19838 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC3.99□□□□□ -1.77
NFKB1P19838 MIR5006-201ENST00000583027 110 ntBASIC3.99□□□□□ -1.77
NFKB1P19838 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC3.99□□□□□ -1.77
NFKB1P19838 AC091152.3-201ENST00000604227 325 ntBASIC3.99□□□□□ -1.77
NFKB1P19838 AP001340.1-201ENST00000624405 217 ntBASIC3.99□□□□□ -1.77
NFKB1P19838 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC3.99□□□□□ -1.77
NFKB1P19838 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
NFKB1P19838 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC3.99□□□□□ -1.77
NFKB1P19838 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
NFKB1P19838 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC3.99□□□□□ -1.77
NFKB1P19838 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC3.99□□□□□ -1.77
NFKB1P19838 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
NFKB1P19838 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
NFKB1P19838 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
NFKB1P19838 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC3.98□□□□□ -1.77
NFKB1P19838 RNU4-15P-201ENST00000362613 141 ntBASIC3.98□□□□□ -1.77
NFKB1P19838 ACEA_U3.1-201ENST00000363057 217 ntBASIC3.98□□□□□ -1.77
NFKB1P19838 RNU6-529P-201ENST00000363383 104 ntBASIC3.98□□□□□ -1.77
NFKB1P19838 U3.9-201ENST00000363823 204 ntBASIC3.98□□□□□ -1.77
NFKB1P19838 Y_RNA.229-201ENST00000364347 113 ntBASIC3.98□□□□□ -1.77
NFKB1P19838 RNU1-13P-201ENST00000384499 162 ntBASIC3.98□□□□□ -1.77
NFKB1P19838 U8.12-201ENST00000384701 133 ntBASIC3.98□□□□□ -1.77
NFKB1P19838 SNORA48.5-201ENST00000391143 135 ntBASIC3.98□□□□□ -1.77
NFKB1P19838 RNU6-460P-201ENST00000391158 108 ntBASIC3.98□□□□□ -1.77
NFKB1P19838 AL133475.1-201ENST00000404414 305 ntBASIC3.98□□□□□ -1.77
NFKB1P19838 AIMP1P2-201ENST00000425294 312 ntBASIC3.98□□□□□ -1.77
NFKB1P19838 SNRPGP5-201ENST00000456003 220 ntBASIC3.98□□□□□ -1.77
NFKB1P19838 PPIAP15-201ENST00000479662 484 ntBASIC3.98□□□□□ -1.77
NFKB1P19838 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC3.98□□□□□ -1.77
NFKB1P19838 U6.115-201ENST00000636045 103 ntBASIC3.98□□□□□ -1.77
NFKB1P19838 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
NFKB1P19838 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC3.98□□□□□ -1.77
NFKB1P19838 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC3.98□□□□□ -1.77
NFKB1P19838 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC3.98□□□□□ -1.77
NFKB1P19838 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
NFKB1P19838 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
NFKB1P19838 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.97□□□□□ -1.77
NFKB1P19838 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC3.97□□□□□ -1.77
NFKB1P19838 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
NFKB1P19838 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
NFKB1P19838 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC3.97□□□□□ -1.77
NFKB1P19838 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC3.97□□□□□ -1.77
NFKB1P19838 SPRR2C-201ENST00000290702 219 ntBASIC3.97□□□□□ -1.77
NFKB1P19838 MIR372-201ENST00000362225 67 ntBASIC3.97□□□□□ -1.77
NFKB1P19838 SNORA18.2-201ENST00000383865 132 ntBASIC3.97□□□□□ -1.77
NFKB1P19838 RNU6-19P-201ENST00000384718 107 ntBASIC3.97□□□□□ -1.77
NFKB1P19838 MT-TT-201ENST00000387460 66 ntBASIC3.97□□□□□ -1.77
NFKB1P19838 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
NFKB1P19838 RNU6-1228P-201ENST00000391014 107 ntBASIC3.97□□□□□ -1.77
NFKB1P19838 MIR1183-201ENST00000408856 89 ntBASIC3.97□□□□□ -1.77
NFKB1P19838 AL365496.1-201ENST00000426885 215 ntBASIC3.97□□□□□ -1.77
NFKB1P19838 AL162151.2-201ENST00000448875 158 ntBASIC3.97□□□□□ -1.77
NFKB1P19838 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC3.97□□□□□ -1.77
NFKB1P19838 AP004242.1-201ENST00000533701 349 ntBASIC3.97□□□□□ -1.77
NFKB1P19838 AC025281.1-201ENST00000567026 265 ntBASIC3.97□□□□□ -1.77
NFKB1P19838 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC3.97□□□□□ -1.77
NFKB1P19838 MIR3609-201ENST00000582661 80 ntBASIC3.97□□□□□ -1.77
NFKB1P19838 AC069200.1-201ENST00000609511 323 ntBASIC3.97□□□□□ -1.77
NFKB1P19838 AC006133.1-201ENST00000617106 264 ntBASIC3.97□□□□□ -1.77
NFKB1P19838 MIR6500-201ENST00000622700 86 ntBASIC3.97□□□□□ -1.77
NFKB1P19838 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC3.97□□□□□ -1.77
NFKB1P19838 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC3.97□□□□□ -1.77
NFKB1P19838 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
NFKB1P19838 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC3.97□□□□□ -1.77
NFKB1P19838 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
NFKB1P19838 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC3.96□□□□□ -1.78
NFKB1P19838 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC3.96□□□□□ -1.78
NFKB1P19838 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
NFKB1P19838 U3.8-201ENST00000363675 217 ntBASIC3.96□□□□□ -1.78
NFKB1P19838 RNA5SP167-201ENST00000365461 116 ntBASIC3.96□□□□□ -1.78
NFKB1P19838 SNORA67.2-201ENST00000384300 149 ntBASIC3.96□□□□□ -1.78
NFKB1P19838 RNU6-768P-201ENST00000384683 107 ntBASIC3.96□□□□□ -1.78
NFKB1P19838 AL606845.1-201ENST00000404881 255 ntBASIC3.96□□□□□ -1.78
NFKB1P19838 AC023141.4-201ENST00000412031 328 ntBASIC3.96□□□□□ -1.78
NFKB1P19838 CRYBB2P1-203ENST00000415709 538 ntBASIC3.96□□□□□ -1.78
NFKB1P19838 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
NFKB1P19838 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC3.96□□□□□ -1.78
NFKB1P19838 HMGN2P20-201ENST00000437531 273 ntBASIC3.96□□□□□ -1.78
NFKB1P19838 Z75741.1-201ENST00000446793 314 ntBASIC3.96□□□□□ -1.78
NFKB1P19838 AP001328.1-201ENST00000528550 176 ntBASIC3.96□□□□□ -1.78
NFKB1P19838 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC3.96□□□□□ -1.78
NFKB1P19838 MIR4724-201ENST00000579485 89 ntBASIC3.96□□□□□ -1.78
NFKB1P19838 U7.2-201ENST00000607576 63 ntBASIC3.96□□□□□ -1.78
NFKB1P19838 AC099778.2-201ENST00000610904 211 ntBASIC3.96□□□□□ -1.78
NFKB1P19838 AC012640.5-201ENST00000623897 319 ntBASIC3.96□□□□□ -1.78
NFKB1P19838 MIR6844-201ENST00000637122 62 ntBASIC3.96□□□□□ -1.78
NFKB1P19838 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
NFKB1P19838 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
NFKB1P19838 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC3.95□□□□□ -1.78
NFKB1P19838 ZNF702P-202ENST00000434269 1966 ntBASIC3.95□□□□□ -1.78
NFKB1P19838 SNORA70.2-201ENST00000364506 135 ntBASIC3.95□□□□□ -1.78
NFKB1P19838 RNA5SP479-201ENST00000364858 117 ntBASIC3.95□□□□□ -1.78
NFKB1P19838 RNU6-728P-201ENST00000365375 104 ntBASIC3.95□□□□□ -1.78
NFKB1P19838 RNU6-144P-201ENST00000383951 107 ntBASIC3.95□□□□□ -1.78
NFKB1P19838 AL117339.2-201ENST00000430475 180 ntBASIC3.95□□□□□ -1.78
NFKB1P19838 AL714022.1-201ENST00000439897 151 ntBASIC3.95□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 231.4 ms