Protein–RNA interactions for Protein: A6NM62

LRRC53, Leucine-rich repeat-containing protein 53, humanhuman

Predictions only

Length 1,247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC53A6NM62 RNU6-1213P-201ENST00000517075 94 ntBASIC2.44□□□□□ -2.02
LRRC53A6NM62 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC2.44□□□□□ -2.02
LRRC53A6NM62 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.44□□□□□ -2.02
LRRC53A6NM62 CYP4A27P-201ENST00000567218 190 ntBASIC2.44□□□□□ -2.02
LRRC53A6NM62 RPS3AP23-202ENST00000574601 686 ntBASIC2.44□□□□□ -2.02
LRRC53A6NM62 AL158827.2-201ENST00000602494 330 ntBASIC2.44□□□□□ -2.02
LRRC53A6NM62 AP000654.2-201ENST00000605633 586 ntBASIC2.44□□□□□ -2.02
LRRC53A6NM62 AC009229.3-201ENST00000608056 282 ntBASIC2.44□□□□□ -2.02
LRRC53A6NM62 AC025253.1-201ENST00000613623 543 ntBASIC2.44□□□□□ -2.02
LRRC53A6NM62 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC2.44□□□□□ -2.02
LRRC53A6NM62 AL691447.3-201ENST00000635020 330 ntBASIC2.44□□□□□ -2.02
LRRC53A6NM62 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC2.44□□□□□ -2.02
LRRC53A6NM62 ZNF736P3Y-201ENST00000428264 1465 ntBASIC2.44□□□□□ -2.02
LRRC53A6NM62 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
LRRC53A6NM62 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.43□□□□□ -2.02
LRRC53A6NM62 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC2.43□□□□□ -2.02
LRRC53A6NM62 Y_RNA.263-201ENST00000364659 114 ntBASIC2.43□□□□□ -2.02
LRRC53A6NM62 Y_RNA.404-201ENST00000383978 102 ntBASIC2.43□□□□□ -2.02
LRRC53A6NM62 Y_RNA.529-201ENST00000384586 119 ntBASIC2.43□□□□□ -2.02
LRRC53A6NM62 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.43□□□□□ -2.02
LRRC53A6NM62 RNA5SP494-201ENST00000410653 129 ntBASIC2.43□□□□□ -2.02
LRRC53A6NM62 Z92545.1-201ENST00000411782 234 ntBASIC2.43□□□□□ -2.02
LRRC53A6NM62 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC2.43□□□□□ -2.02
LRRC53A6NM62 RN7SL636P-201ENST00000497504 294 ntBASIC2.43□□□□□ -2.02
LRRC53A6NM62 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.43□□□□□ -2.02
LRRC53A6NM62 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC2.43□□□□□ -2.02
LRRC53A6NM62 RNU6-567P-201ENST00000516746 107 ntBASIC2.43□□□□□ -2.02
LRRC53A6NM62 Y_RNA.708-201ENST00000516950 96 ntBASIC2.43□□□□□ -2.02
LRRC53A6NM62 RNU1-104P-201ENST00000517280 175 ntBASIC2.43□□□□□ -2.02
LRRC53A6NM62 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC2.43□□□□□ -2.02
LRRC53A6NM62 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC2.43□□□□□ -2.02
LRRC53A6NM62 MIR5696-201ENST00000578474 85 ntBASIC2.43□□□□□ -2.02
LRRC53A6NM62 AC113139.1-201ENST00000605049 239 ntBASIC2.43□□□□□ -2.02
LRRC53A6NM62 PCGEM1.1-201ENST00000613431 131 ntBASIC2.43□□□□□ -2.02
LRRC53A6NM62 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC2.43□□□□□ -2.02
LRRC53A6NM62 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC2.43□□□□□ -2.02
LRRC53A6NM62 KPNA2P1-201ENST00000458289 1591 ntBASIC2.43□□□□□ -2.02
LRRC53A6NM62 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
LRRC53A6NM62 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.42□□□□□ -2.02
LRRC53A6NM62 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.42□□□□□ -2.02
LRRC53A6NM62 Y_RNA.2-201ENST00000362330 96 ntBASIC2.42□□□□□ -2.02
LRRC53A6NM62 Y_RNA.356-201ENST00000365475 113 ntBASIC2.42□□□□□ -2.02
LRRC53A6NM62 MIR561-201ENST00000385216 97 ntBASIC2.42□□□□□ -2.02
LRRC53A6NM62 MIR208B-201ENST00000401172 77 ntBASIC2.42□□□□□ -2.02
LRRC53A6NM62 RNU6-370P-201ENST00000411008 104 ntBASIC2.42□□□□□ -2.02
LRRC53A6NM62 RNU2-32P-201ENST00000411193 191 ntBASIC2.42□□□□□ -2.02
LRRC53A6NM62 AL358453.1-201ENST00000422522 250 ntBASIC2.42□□□□□ -2.02
LRRC53A6NM62 Z82188.1-201ENST00000436709 154 ntBASIC2.42□□□□□ -2.02
LRRC53A6NM62 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC2.42□□□□□ -2.02
LRRC53A6NM62 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC2.42□□□□□ -2.02
LRRC53A6NM62 AC018868.1-201ENST00000491307 315 ntBASIC2.42□□□□□ -2.02
LRRC53A6NM62 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC2.42□□□□□ -2.02
LRRC53A6NM62 RNA5SP24-201ENST00000516478 95 ntBASIC2.42□□□□□ -2.02
LRRC53A6NM62 RNA5SP384-201ENST00000516615 116 ntBASIC2.42□□□□□ -2.02
LRRC53A6NM62 RNU6-965P-201ENST00000516721 96 ntBASIC2.42□□□□□ -2.02
LRRC53A6NM62 HSPE1P18-201ENST00000517602 280 ntBASIC2.42□□□□□ -2.02
LRRC53A6NM62 AL008636.1-201ENST00000625038 1018 ntBASIC2.42□□□□□ -2.02
LRRC53A6NM62 MIR1302-1-201ENST00000637932 143 ntBASIC2.42□□□□□ -2.02
LRRC53A6NM62 AC112487.2-201ENST00000637950 304 ntBASIC2.42□□□□□ -2.02
LRRC53A6NM62 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC2.42□□□□□ -2.02
LRRC53A6NM62 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC2.42□□□□□ -2.02
LRRC53A6NM62 AC131280.1-202ENST00000624067 4211 ntBASIC2.41□□□□□ -2.02
LRRC53A6NM62 SNORD32B-201ENST00000364460 84 ntBASIC2.41□□□□□ -2.02
LRRC53A6NM62 RNU6-867P-201ENST00000364956 107 ntBASIC2.41□□□□□ -2.02
LRRC53A6NM62 SNORA75.4-201ENST00000391278 119 ntBASIC2.41□□□□□ -2.02
LRRC53A6NM62 AC007064.1-201ENST00000412238 351 ntBASIC2.41□□□□□ -2.02
LRRC53A6NM62 AC087477.1-201ENST00000465747 340 ntBASIC2.41□□□□□ -2.02
LRRC53A6NM62 AC068781.1-201ENST00000488231 618 ntBASIC2.41□□□□□ -2.02
LRRC53A6NM62 MIR449C-201ENST00000516047 92 ntBASIC2.41□□□□□ -2.02
LRRC53A6NM62 RNU6-559P-201ENST00000516151 98 ntBASIC2.41□□□□□ -2.02
LRRC53A6NM62 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC2.41□□□□□ -2.02
LRRC53A6NM62 CBX3P8-201ENST00000532412 525 ntBASIC2.41□□□□□ -2.02
LRRC53A6NM62 APOOP3-201ENST00000536787 586 ntBASIC2.41□□□□□ -2.02
LRRC53A6NM62 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC2.41□□□□□ -2.02
LRRC53A6NM62 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC2.41□□□□□ -2.02
LRRC53A6NM62 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC2.41□□□□□ -2.02
LRRC53A6NM62 AC010928.2-201ENST00000588017 287 ntBASIC2.41□□□□□ -2.02
LRRC53A6NM62 AC005520.5-201ENST00000613926 164 ntBASIC2.41□□□□□ -2.02
LRRC53A6NM62 U4atac.1-201ENST00000618345 95 ntBASIC2.41□□□□□ -2.02
LRRC53A6NM62 AC098657.3-201ENST00000620434 263 ntBASIC2.41□□□□□ -2.02
LRRC53A6NM62 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.02
LRRC53A6NM62 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC2.4□□□□□ -2.03
LRRC53A6NM62 RNU6-525P-201ENST00000363685 104 ntBASIC2.4□□□□□ -2.03
LRRC53A6NM62 RNU6-546P-201ENST00000383991 107 ntBASIC2.4□□□□□ -2.03
LRRC53A6NM62 RNU6-331P-201ENST00000384724 107 ntBASIC2.4□□□□□ -2.03
LRRC53A6NM62 RNU6-1093P-201ENST00000391194 107 ntBASIC2.4□□□□□ -2.03
LRRC53A6NM62 RNU2-48P-201ENST00000410694 191 ntBASIC2.4□□□□□ -2.03
LRRC53A6NM62 AC243428.1-201ENST00000421099 264 ntBASIC2.4□□□□□ -2.03
LRRC53A6NM62 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC2.4□□□□□ -2.03
LRRC53A6NM62 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC2.4□□□□□ -2.03
LRRC53A6NM62 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC2.4□□□□□ -2.03
LRRC53A6NM62 AC009238.1-201ENST00000442165 424 ntBASIC2.4□□□□□ -2.03
LRRC53A6NM62 AC009237.6-201ENST00000446969 424 ntBASIC2.4□□□□□ -2.03
LRRC53A6NM62 AL139109.1-201ENST00000455491 297 ntBASIC2.4□□□□□ -2.03
LRRC53A6NM62 FGF7P4-201ENST00000509595 295 ntBASIC2.4□□□□□ -2.03
LRRC53A6NM62 AC018630.3-201ENST00000542637 96 ntBASIC2.4□□□□□ -2.03
LRRC53A6NM62 FRG2DP-202ENST00000566967 323 ntBASIC2.4□□□□□ -2.03
LRRC53A6NM62 MYL12BP1-201ENST00000569826 507 ntBASIC2.4□□□□□ -2.03
LRRC53A6NM62 AL355375.2-201ENST00000574825 175 ntBASIC2.4□□□□□ -2.03
LRRC53A6NM62 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC2.4□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 160.9 ms