Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 AC068205.3-201ENST00000636385 468 ntBASIC4.21□□□□□ -1.74
TMEM88BA6NKF7 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC4.21□□□□□ -1.74
TMEM88BA6NKF7 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
TMEM88BA6NKF7 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.74
TMEM88BA6NKF7 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC4.21□□□□□ -1.74
TMEM88BA6NKF7 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.2□□□□□ -1.74
TMEM88BA6NKF7 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
TMEM88BA6NKF7 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
TMEM88BA6NKF7 AC091564.4-201ENST00000533934 2194 ntBASIC4.2□□□□□ -1.74
TMEM88BA6NKF7 Y_RNA.590-201ENST00000410140 107 ntBASIC4.2□□□□□ -1.74
TMEM88BA6NKF7 ELOCP21-201ENST00000412558 336 ntBASIC4.2□□□□□ -1.74
TMEM88BA6NKF7 PIGPP3-201ENST00000425307 415 ntBASIC4.2□□□□□ -1.74
TMEM88BA6NKF7 AC107083.1-201ENST00000439643 279 ntBASIC4.2□□□□□ -1.74
TMEM88BA6NKF7 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC4.2□□□□□ -1.74
TMEM88BA6NKF7 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC4.2□□□□□ -1.74
TMEM88BA6NKF7 RNA5SP208-201ENST00000516156 78 ntBASIC4.2□□□□□ -1.74
TMEM88BA6NKF7 RNU6-155P-201ENST00000516347 100 ntBASIC4.2□□□□□ -1.74
TMEM88BA6NKF7 RNU2-44P-201ENST00000516795 194 ntBASIC4.2□□□□□ -1.74
TMEM88BA6NKF7 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC4.2□□□□□ -1.74
TMEM88BA6NKF7 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC4.2□□□□□ -1.74
TMEM88BA6NKF7 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC4.2□□□□□ -1.74
TMEM88BA6NKF7 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
TMEM88BA6NKF7 XIST_intron.1-201ENST00000619444 68 ntBASIC4.2□□□□□ -1.74
TMEM88BA6NKF7 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC4.2□□□□□ -1.74
TMEM88BA6NKF7 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
TMEM88BA6NKF7 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
TMEM88BA6NKF7 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC4.19□□□□□ -1.74
TMEM88BA6NKF7 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC4.19□□□□□ -1.74
TMEM88BA6NKF7 Y_RNA.199-201ENST00000364014 102 ntBASIC4.19□□□□□ -1.74
TMEM88BA6NKF7 Y_RNA.275-201ENST00000364726 110 ntBASIC4.19□□□□□ -1.74
TMEM88BA6NKF7 SNORA18.2-201ENST00000383865 132 ntBASIC4.19□□□□□ -1.74
TMEM88BA6NKF7 SNORA48.8-201ENST00000391324 134 ntBASIC4.19□□□□□ -1.74
TMEM88BA6NKF7 AC009414.1-201ENST00000427200 443 ntBASIC4.19□□□□□ -1.74
TMEM88BA6NKF7 ATP6V0E1P4-201ENST00000427294 242 ntBASIC4.19□□□□□ -1.74
TMEM88BA6NKF7 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC4.19□□□□□ -1.74
TMEM88BA6NKF7 COX6CP14-201ENST00000469580 174 ntBASIC4.19□□□□□ -1.74
TMEM88BA6NKF7 AC006445.1-201ENST00000491925 405 ntBASIC4.19□□□□□ -1.74
TMEM88BA6NKF7 SNORA27.4-201ENST00000516650 95 ntBASIC4.19□□□□□ -1.74
TMEM88BA6NKF7 IGKV2-26-201ENST00000518305 343 ntBASIC4.19□□□□□ -1.74
TMEM88BA6NKF7 AC022080.3-201ENST00000544433 482 ntBASIC4.19□□□□□ -1.74
TMEM88BA6NKF7 AC008011.1-201ENST00000545989 227 ntBASIC4.19□□□□□ -1.74
TMEM88BA6NKF7 HNRNPDLP4-201ENST00000605144 301 ntBASIC4.19□□□□□ -1.74
TMEM88BA6NKF7 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC4.19□□□□□ -1.74
TMEM88BA6NKF7 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC4.19□□□□□ -1.74
TMEM88BA6NKF7 AL137790.1-201ENST00000634283 177 ntBASIC4.19□□□□□ -1.74
TMEM88BA6NKF7 U6.98-201ENST00000637157 84 ntBASIC4.19□□□□□ -1.74
TMEM88BA6NKF7 AL773545.4-201ENST00000637262 310 ntBASIC4.19□□□□□ -1.74
TMEM88BA6NKF7 AL513478.4-201ENST00000641636 310 ntBASIC4.19□□□□□ -1.74
TMEM88BA6NKF7 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
TMEM88BA6NKF7 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
TMEM88BA6NKF7 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC4.19□□□□□ -1.74
TMEM88BA6NKF7 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
TMEM88BA6NKF7 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
TMEM88BA6NKF7 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.19□□□□□ -1.74
TMEM88BA6NKF7 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC4.18□□□□□ -1.74
TMEM88BA6NKF7 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC4.18□□□□□ -1.74
TMEM88BA6NKF7 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
TMEM88BA6NKF7 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC4.18□□□□□ -1.74
TMEM88BA6NKF7 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC4.18□□□□□ -1.74
TMEM88BA6NKF7 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
TMEM88BA6NKF7 UBE2WP1-201ENST00000362030 340 ntBASIC4.18□□□□□ -1.74
TMEM88BA6NKF7 Y_RNA.446-201ENST00000384178 104 ntBASIC4.18□□□□□ -1.74
TMEM88BA6NKF7 SNORA44-201ENST00000384584 132 ntBASIC4.18□□□□□ -1.74
TMEM88BA6NKF7 MIR1183-201ENST00000408856 89 ntBASIC4.18□□□□□ -1.74
TMEM88BA6NKF7 RNU2-61P-201ENST00000411069 191 ntBASIC4.18□□□□□ -1.74
TMEM88BA6NKF7 Y_RNA.793-201ENST00000411222 111 ntBASIC4.18□□□□□ -1.74
TMEM88BA6NKF7 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC4.18□□□□□ -1.74
TMEM88BA6NKF7 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC4.18□□□□□ -1.74
TMEM88BA6NKF7 APOA2-205ENST00000468465 421 ntTSL 2 BASIC4.18□□□□□ -1.74
TMEM88BA6NKF7 AC091959.1-201ENST00000495857 238 ntBASIC4.18□□□□□ -1.74
TMEM88BA6NKF7 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC4.18□□□□□ -1.74
TMEM88BA6NKF7 TGIF1P1-201ENST00000558095 802 ntBASIC4.18□□□□□ -1.74
TMEM88BA6NKF7 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC4.18□□□□□ -1.74
TMEM88BA6NKF7 AC093732.2-201ENST00000607950 274 ntBASIC4.18□□□□□ -1.74
TMEM88BA6NKF7 U4.6-201ENST00000621618 127 ntBASIC4.18□□□□□ -1.74
TMEM88BA6NKF7 AC091932.3-201ENST00000624223 323 ntBASIC4.18□□□□□ -1.74
TMEM88BA6NKF7 AC090517.3-201ENST00000625170 141 ntBASIC4.18□□□□□ -1.74
TMEM88BA6NKF7 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC4.18□□□□□ -1.74
TMEM88BA6NKF7 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
TMEM88BA6NKF7 AC093908.1-201ENST00000623125 8092 ntBASIC4.18□□□□□ -1.74
TMEM88BA6NKF7 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC4.18□□□□□ -1.74
TMEM88BA6NKF7 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
TMEM88BA6NKF7 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
TMEM88BA6NKF7 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
TMEM88BA6NKF7 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
TMEM88BA6NKF7 RNA5-8SP4-201ENST00000365096 150 ntBASIC4.17□□□□□ -1.74
TMEM88BA6NKF7 Y_RNA.415-201ENST00000384012 112 ntBASIC4.17□□□□□ -1.74
TMEM88BA6NKF7 MIR548I3-201ENST00000408378 149 ntBASIC4.17□□□□□ -1.74
TMEM88BA6NKF7 MIR548I1-201ENST00000408810 149 ntBASIC4.17□□□□□ -1.74
TMEM88BA6NKF7 RNU2-54P-201ENST00000410299 190 ntBASIC4.17□□□□□ -1.74
TMEM88BA6NKF7 RNU2-14P-201ENST00000411053 191 ntBASIC4.17□□□□□ -1.74
TMEM88BA6NKF7 AL139156.1-201ENST00000412785 841 ntBASIC4.17□□□□□ -1.74
TMEM88BA6NKF7 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC4.17□□□□□ -1.74
TMEM88BA6NKF7 PRELID3BP1-201ENST00000457142 540 ntBASIC4.17□□□□□ -1.74
TMEM88BA6NKF7 RN7SL585P-201ENST00000470538 280 ntBASIC4.17□□□□□ -1.74
TMEM88BA6NKF7 MRPS36P2-201ENST00000512569 299 ntBASIC4.17□□□□□ -1.74
TMEM88BA6NKF7 RNU1-117P-201ENST00000517041 158 ntBASIC4.17□□□□□ -1.74
TMEM88BA6NKF7 IGLV3-26-201ENST00000520756 302 ntBASIC4.17□□□□□ -1.74
TMEM88BA6NKF7 AL109918.3-201ENST00000603072 338 ntBASIC4.17□□□□□ -1.74
TMEM88BA6NKF7 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 188.6 ms