Protein–RNA interactions for Protein: Q9H3Q1

CDC42EP4, Cdc42 effector protein 4, humanhuman

Known RBP Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4Q9H3Q1 AL512360.1-201ENST00000555346 234 ntBASIC1.57□□□□□ -2.16
CDC42EP4Q9H3Q1 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.57□□□□□ -2.16
CDC42EP4Q9H3Q1 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC1.57□□□□□ -2.16
CDC42EP4Q9H3Q1 AC090517.3-201ENST00000625170 141 ntBASIC1.57□□□□□ -2.16
CDC42EP4Q9H3Q1 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.57□□□□□ -2.16
CDC42EP4Q9H3Q1 Y_RNA.4-201ENST00000362333 112 ntBASIC1.56□□□□□ -2.16
CDC42EP4Q9H3Q1 RNU6-623P-201ENST00000363143 105 ntBASIC1.56□□□□□ -2.16
CDC42EP4Q9H3Q1 U3.13-201ENST00000364804 214 ntBASIC1.56□□□□□ -2.16
CDC42EP4Q9H3Q1 RNU4-66P-201ENST00000365199 138 ntBASIC1.56□□□□□ -2.16
CDC42EP4Q9H3Q1 MIR29B2-201ENST00000385055 81 ntBASIC1.56□□□□□ -2.16
CDC42EP4Q9H3Q1 SNORD37.1-201ENST00000390968 65 ntBASIC1.56□□□□□ -2.16
CDC42EP4Q9H3Q1 RNU6-908P-201ENST00000410160 94 ntBASIC1.56□□□□□ -2.16
CDC42EP4Q9H3Q1 RNU2-32P-201ENST00000411193 191 ntBASIC1.56□□□□□ -2.16
CDC42EP4Q9H3Q1 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC1.56□□□□□ -2.16
CDC42EP4Q9H3Q1 RPL23AP95-201ENST00000426806 265 ntBASIC1.56□□□□□ -2.16
CDC42EP4Q9H3Q1 AL589823.1-201ENST00000429577 183 ntBASIC1.56□□□□□ -2.16
CDC42EP4Q9H3Q1 MTCO2P7-201ENST00000446518 666 ntBASIC1.56□□□□□ -2.16
CDC42EP4Q9H3Q1 MTND3P16-201ENST00000452205 344 ntBASIC1.56□□□□□ -2.16
CDC42EP4Q9H3Q1 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC1.56□□□□□ -2.16
CDC42EP4Q9H3Q1 FO393415.2-201ENST00000480085 343 ntBASIC1.56□□□□□ -2.16
CDC42EP4Q9H3Q1 Y_RNA.654-201ENST00000497848 106 ntBASIC1.56□□□□□ -2.16
CDC42EP4Q9H3Q1 HMGB1P35-201ENST00000503360 598 ntBASIC1.56□□□□□ -2.16
CDC42EP4Q9H3Q1 AK3P2-201ENST00000507976 429 ntBASIC1.56□□□□□ -2.16
CDC42EP4Q9H3Q1 RNU6-1053P-201ENST00000515930 101 ntBASIC1.56□□□□□ -2.16
CDC42EP4Q9H3Q1 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC1.56□□□□□ -2.16
CDC42EP4Q9H3Q1 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC1.56□□□□□ -2.16
CDC42EP4Q9H3Q1 AC115990.1-201ENST00000526957 301 ntBASIC1.56□□□□□ -2.16
CDC42EP4Q9H3Q1 AP000763.2-201ENST00000540641 163 ntBASIC1.56□□□□□ -2.16
CDC42EP4Q9H3Q1 HMGB1P33-201ENST00000563485 527 ntBASIC1.56□□□□□ -2.16
CDC42EP4Q9H3Q1 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC1.56□□□□□ -2.16
CDC42EP4Q9H3Q1 AC023043.2-201ENST00000589678 1026 ntBASIC1.56□□□□□ -2.16
CDC42EP4Q9H3Q1 AC092747.3-201ENST00000603769 301 ntBASIC1.56□□□□□ -2.16
CDC42EP4Q9H3Q1 AC107304.1-201ENST00000604229 296 ntBASIC1.56□□□□□ -2.16
CDC42EP4Q9H3Q1 AC018889.1-201ENST00000605372 397 ntBASIC1.56□□□□□ -2.16
CDC42EP4Q9H3Q1 BX248123.2-201ENST00000606318 124 ntBASIC1.56□□□□□ -2.16
CDC42EP4Q9H3Q1 AC092807.2-201ENST00000609367 243 ntBASIC1.56□□□□□ -2.16
CDC42EP4Q9H3Q1 AC015540.1-201ENST00000615828 501 ntBASIC1.56□□□□□ -2.16
CDC42EP4Q9H3Q1 AC005296.1-201ENST00000616145 209 ntBASIC1.56□□□□□ -2.16
CDC42EP4Q9H3Q1 AL132822.1-201ENST00000617063 513 ntBASIC1.56□□□□□ -2.16
CDC42EP4Q9H3Q1 AC068137.3-201ENST00000639191 341 ntBASIC1.56□□□□□ -2.16
CDC42EP4Q9H3Q1 AC099654.12-201ENST00000639868 649 ntBASIC1.56□□□□□ -2.16
CDC42EP4Q9H3Q1 AC008555.8-201ENST00000623602 2168 ntBASIC1.56□□□□□ -2.16
CDC42EP4Q9H3Q1 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC1.56□□□□□ -2.16
CDC42EP4Q9H3Q1 AC006026.1-201ENST00000444025 1803 ntBASIC1.55□□□□□ -2.16
CDC42EP4Q9H3Q1 RNU6-522P-201ENST00000364497 107 ntBASIC1.55□□□□□ -2.16
CDC42EP4Q9H3Q1 Y_RNA.372-201ENST00000365599 102 ntBASIC1.55□□□□□ -2.16
CDC42EP4Q9H3Q1 RNU6-483P-201ENST00000384088 108 ntBASIC1.55□□□□□ -2.16
CDC42EP4Q9H3Q1 SNORD73A-201ENST00000386062 65 ntBASIC1.55□□□□□ -2.16
CDC42EP4Q9H3Q1 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC1.55□□□□□ -2.16
CDC42EP4Q9H3Q1 RNU6-1068P-201ENST00000410958 103 ntBASIC1.55□□□□□ -2.16
CDC42EP4Q9H3Q1 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC1.55□□□□□ -2.16
CDC42EP4Q9H3Q1 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC1.55□□□□□ -2.16
CDC42EP4Q9H3Q1 AC108667.1-201ENST00000428618 249 ntBASIC1.55□□□□□ -2.16
CDC42EP4Q9H3Q1 MTCO2P3-201ENST00000442543 421 ntBASIC1.55□□□□□ -2.16
CDC42EP4Q9H3Q1 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC1.55□□□□□ -2.16
CDC42EP4Q9H3Q1 AMD1P1-201ENST00000457220 922 ntBASIC1.55□□□□□ -2.16
CDC42EP4Q9H3Q1 RNU6-1208P-201ENST00000459588 107 ntBASIC1.55□□□□□ -2.16
CDC42EP4Q9H3Q1 AC023790.1-201ENST00000482174 347 ntBASIC1.55□□□□□ -2.16
CDC42EP4Q9H3Q1 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
CDC42EP4Q9H3Q1 SNORA25.15-201ENST00000516487 89 ntBASIC1.55□□□□□ -2.16
CDC42EP4Q9H3Q1 RNU6-506P-201ENST00000516553 94 ntBASIC1.55□□□□□ -2.16
CDC42EP4Q9H3Q1 Y_RNA.704-201ENST00000516851 102 ntBASIC1.55□□□□□ -2.16
CDC42EP4Q9H3Q1 RNU6-667P-201ENST00000517186 102 ntBASIC1.55□□□□□ -2.16
CDC42EP4Q9H3Q1 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC1.55□□□□□ -2.16
CDC42EP4Q9H3Q1 AP005597.4-201ENST00000526762 229 ntBASIC1.55□□□□□ -2.16
CDC42EP4Q9H3Q1 AC245505.1-201ENST00000556398 224 ntBASIC1.55□□□□□ -2.16
CDC42EP4Q9H3Q1 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC1.55□□□□□ -2.16
CDC42EP4Q9H3Q1 MIR3126-201ENST00000577443 74 ntBASIC1.55□□□□□ -2.16
CDC42EP4Q9H3Q1 MIR4498-201ENST00000577599 66 ntBASIC1.55□□□□□ -2.16
CDC42EP4Q9H3Q1 AL670379.2-201ENST00000604983 252 ntBASIC1.55□□□□□ -2.16
CDC42EP4Q9H3Q1 AL356157.2-201ENST00000605122 111 ntBASIC1.55□□□□□ -2.16
CDC42EP4Q9H3Q1 MIR502-201ENST00000606349 86 ntBASIC1.55□□□□□ -2.16
CDC42EP4Q9H3Q1 AF250324.2-201ENST00000608299 610 ntBASIC1.55□□□□□ -2.16
CDC42EP4Q9H3Q1 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
CDC42EP4Q9H3Q1 AP000560.1-201ENST00000624150 1937 ntBASIC1.55□□□□□ -2.16
CDC42EP4Q9H3Q1 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
CDC42EP4Q9H3Q1 RNU4-15P-201ENST00000362613 141 ntBASIC1.54□□□□□ -2.16
CDC42EP4Q9H3Q1 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
CDC42EP4Q9H3Q1 RNU6-546P-201ENST00000383991 107 ntBASIC1.54□□□□□ -2.16
CDC42EP4Q9H3Q1 SNORD116-4-201ENST00000384733 96 ntBASIC1.54□□□□□ -2.16
CDC42EP4Q9H3Q1 SNORA26.3-201ENST00000391119 136 ntBASIC1.54□□□□□ -2.16
CDC42EP4Q9H3Q1 MIR1304-201ENST00000408243 91 ntBASIC1.54□□□□□ -2.16
CDC42EP4Q9H3Q1 RN7SKP61-201ENST00000410642 295 ntBASIC1.54□□□□□ -2.16
CDC42EP4Q9H3Q1 AC007098.1-201ENST00000420122 367 ntBASIC1.54□□□□□ -2.16
CDC42EP4Q9H3Q1 MTND3P21-201ENST00000433774 331 ntBASIC1.54□□□□□ -2.16
CDC42EP4Q9H3Q1 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC1.54□□□□□ -2.16
CDC42EP4Q9H3Q1 RPL23AP3-201ENST00000453844 468 ntBASIC1.54□□□□□ -2.16
CDC42EP4Q9H3Q1 AC022447.4-201ENST00000504053 364 ntBASIC1.54□□□□□ -2.16
CDC42EP4Q9H3Q1 RNU6-1281P-201ENST00000516223 105 ntBASIC1.54□□□□□ -2.16
CDC42EP4Q9H3Q1 SNORD60.2-201ENST00000516883 86 ntBASIC1.54□□□□□ -2.16
CDC42EP4Q9H3Q1 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.54□□□□□ -2.16
CDC42EP4Q9H3Q1 AC107953.1-201ENST00000522216 297 ntBASIC1.54□□□□□ -2.16
CDC42EP4Q9H3Q1 AC022616.8-201ENST00000533569 253 ntBASIC1.54□□□□□ -2.16
CDC42EP4Q9H3Q1 GNAI2P1-201ENST00000541815 315 ntBASIC1.54□□□□□ -2.16
CDC42EP4Q9H3Q1 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC1.54□□□□□ -2.16
CDC42EP4Q9H3Q1 EIF1P4-201ENST00000572664 335 ntBASIC1.54□□□□□ -2.16
CDC42EP4Q9H3Q1 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC1.54□□□□□ -2.16
CDC42EP4Q9H3Q1 MIR3683-201ENST00000580847 82 ntBASIC1.54□□□□□ -2.16
CDC42EP4Q9H3Q1 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC1.54□□□□□ -2.16
CDC42EP4Q9H3Q1 MIR5692C1-201ENST00000585309 91 ntBASIC1.54□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 232.6 ms