Protein–RNA interactions for Protein: Q96MX0

CMTM3, CKLF-like MARVEL transmembrane domain-containing protein 3, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3Q96MX0 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
CMTM3Q96MX0 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
CMTM3Q96MX0 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.28□□□□□ -2.05
CMTM3Q96MX0 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
CMTM3Q96MX0 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
CMTM3Q96MX0 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
CMTM3Q96MX0 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC2.27□□□□□ -2.05
CMTM3Q96MX0 Y_RNA.390-201ENST00000383932 102 ntBASIC2.27□□□□□ -2.05
CMTM3Q96MX0 HMGN2P39-201ENST00000398005 273 ntBASIC2.27□□□□□ -2.05
CMTM3Q96MX0 MIR1262-201ENST00000408276 93 ntBASIC2.27□□□□□ -2.05
CMTM3Q96MX0 RN7SKP284-201ENST00000411002 343 ntBASIC2.27□□□□□ -2.05
CMTM3Q96MX0 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.27□□□□□ -2.05
CMTM3Q96MX0 HMGB1P18-201ENST00000438801 619 ntBASIC2.27□□□□□ -2.05
CMTM3Q96MX0 AC011816.1-201ENST00000441346 546 ntBASIC2.27□□□□□ -2.05
CMTM3Q96MX0 RPS3AP12-201ENST00000443616 753 ntBASIC2.27□□□□□ -2.05
CMTM3Q96MX0 HMGN2P18-201ENST00000450680 270 ntBASIC2.27□□□□□ -2.05
CMTM3Q96MX0 AC107399.1-201ENST00000451226 265 ntBASIC2.27□□□□□ -2.05
CMTM3Q96MX0 OR2AQ1P-201ENST00000451972 200 ntBASIC2.27□□□□□ -2.05
CMTM3Q96MX0 AC087477.1-201ENST00000465747 340 ntBASIC2.27□□□□□ -2.05
CMTM3Q96MX0 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC2.27□□□□□ -2.05
CMTM3Q96MX0 AC093259.1-201ENST00000509755 300 ntBASIC2.27□□□□□ -2.05
CMTM3Q96MX0 SNORA74D-201ENST00000516404 141 ntBASIC2.27□□□□□ -2.05
CMTM3Q96MX0 SNORA70.24-201ENST00000517233 118 ntBASIC2.27□□□□□ -2.05
CMTM3Q96MX0 SNORA31.25-201ENST00000517242 134 ntBASIC2.27□□□□□ -2.05
CMTM3Q96MX0 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC2.27□□□□□ -2.05
CMTM3Q96MX0 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC2.27□□□□□ -2.05
CMTM3Q96MX0 AC090517.1-201ENST00000569307 266 ntBASIC2.27□□□□□ -2.05
CMTM3Q96MX0 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC2.27□□□□□ -2.05
CMTM3Q96MX0 MIR5696-201ENST00000578474 85 ntBASIC2.27□□□□□ -2.05
CMTM3Q96MX0 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC2.27□□□□□ -2.05
CMTM3Q96MX0 SCARNA4-201ENST00000629045 128 ntBASIC2.27□□□□□ -2.05
CMTM3Q96MX0 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC2.27□□□□□ -2.05
CMTM3Q96MX0 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
CMTM3Q96MX0 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
CMTM3Q96MX0 AL596028.1-201ENST00000326971 197 ntBASIC2.26□□□□□ -2.05
CMTM3Q96MX0 RNU6-593P-201ENST00000364716 112 ntBASIC2.26□□□□□ -2.05
CMTM3Q96MX0 RNU4-9P-201ENST00000364951 139 ntBASIC2.26□□□□□ -2.05
CMTM3Q96MX0 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC2.26□□□□□ -2.05
CMTM3Q96MX0 MIR29C-201ENST00000385231 88 ntBASIC2.26□□□□□ -2.05
CMTM3Q96MX0 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.26□□□□□ -2.05
CMTM3Q96MX0 AL358453.1-201ENST00000422522 250 ntBASIC2.26□□□□□ -2.05
CMTM3Q96MX0 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC2.26□□□□□ -2.05
CMTM3Q96MX0 RPS3AP52-201ENST00000435639 297 ntBASIC2.26□□□□□ -2.05
CMTM3Q96MX0 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC2.26□□□□□ -2.05
CMTM3Q96MX0 AC116353.2-201ENST00000505332 712 ntBASIC2.26□□□□□ -2.05
CMTM3Q96MX0 RNA5SP282-201ENST00000516355 108 ntBASIC2.26□□□□□ -2.05
CMTM3Q96MX0 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC2.26□□□□□ -2.05
CMTM3Q96MX0 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC2.26□□□□□ -2.05
CMTM3Q96MX0 B3GNTL1P2-201ENST00000603673 288 ntBASIC2.26□□□□□ -2.05
CMTM3Q96MX0 uc_338.5-201ENST00000611839 155 ntBASIC2.26□□□□□ -2.05
CMTM3Q96MX0 AL359314.1-201ENST00000616913 261 ntBASIC2.26□□□□□ -2.05
CMTM3Q96MX0 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.26□□□□□ -2.05
CMTM3Q96MX0 ZNF736P3Y-201ENST00000428264 1465 ntBASIC2.26□□□□□ -2.05
CMTM3Q96MX0 AL356057.3-201ENST00000402607 340 ntBASIC2.25□□□□□ -2.05
CMTM3Q96MX0 RPL37P10-201ENST00000412884 288 ntBASIC2.25□□□□□ -2.05
CMTM3Q96MX0 PDCL2P1-201ENST00000419302 352 ntBASIC2.25□□□□□ -2.05
CMTM3Q96MX0 AC098614.3-201ENST00000438957 440 ntBASIC2.25□□□□□ -2.05
CMTM3Q96MX0 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC2.25□□□□□ -2.05
CMTM3Q96MX0 FO393415.2-201ENST00000480085 343 ntBASIC2.25□□□□□ -2.05
CMTM3Q96MX0 RPS27P21-201ENST00000486977 252 ntBASIC2.25□□□□□ -2.05
CMTM3Q96MX0 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC2.25□□□□□ -2.05
CMTM3Q96MX0 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC2.25□□□□□ -2.05
CMTM3Q96MX0 RNU6-991P-201ENST00000516168 107 ntBASIC2.25□□□□□ -2.05
CMTM3Q96MX0 RNU6-1016P-201ENST00000516689 94 ntBASIC2.25□□□□□ -2.05
CMTM3Q96MX0 RNU6-1098P-201ENST00000516772 96 ntBASIC2.25□□□□□ -2.05
CMTM3Q96MX0 MIR514B-201ENST00000516774 80 ntBASIC2.25□□□□□ -2.05
CMTM3Q96MX0 RNA5SP490-201ENST00000517141 136 ntBASIC2.25□□□□□ -2.05
CMTM3Q96MX0 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC2.25□□□□□ -2.05
CMTM3Q96MX0 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC2.25□□□□□ -2.05
CMTM3Q96MX0 AC018462.2-201ENST00000605375 395 ntBASIC2.25□□□□□ -2.05
CMTM3Q96MX0 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC2.25□□□□□ -2.05
CMTM3Q96MX0 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2.25□□□□□ -2.05
CMTM3Q96MX0 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC2.25□□□□□ -2.05
CMTM3Q96MX0 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
CMTM3Q96MX0 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
CMTM3Q96MX0 AP006437.1-201ENST00000641440 3685 ntBASIC2.24□□□□□ -2.05
CMTM3Q96MX0 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.24□□□□□ -2.05
CMTM3Q96MX0 RNU1-76P-201ENST00000362903 159 ntBASIC2.24□□□□□ -2.05
CMTM3Q96MX0 RNU6-525P-201ENST00000363685 104 ntBASIC2.24□□□□□ -2.05
CMTM3Q96MX0 RNU6-1059P-201ENST00000363752 98 ntBASIC2.24□□□□□ -2.05
CMTM3Q96MX0 Y_RNA.184-201ENST00000363884 108 ntBASIC2.24□□□□□ -2.05
CMTM3Q96MX0 SNORD81.2-201ENST00000365153 76 ntBASIC2.24□□□□□ -2.05
CMTM3Q96MX0 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC2.24□□□□□ -2.05
CMTM3Q96MX0 RNU6-842P-201ENST00000384269 107 ntBASIC2.24□□□□□ -2.05
CMTM3Q96MX0 SNORD14D-201ENST00000384390 87 ntBASIC2.24□□□□□ -2.05
CMTM3Q96MX0 SNORA11-201ENST00000408789 128 ntBASIC2.24□□□□□ -2.05
CMTM3Q96MX0 RNA5SP21-201ENST00000410917 96 ntBASIC2.24□□□□□ -2.05
CMTM3Q96MX0 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC2.24□□□□□ -2.05
CMTM3Q96MX0 AL035666.1-201ENST00000446195 348 ntBASIC2.24□□□□□ -2.05
CMTM3Q96MX0 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC2.24□□□□□ -2.05
CMTM3Q96MX0 MTND3P10-201ENST00000450967 341 ntBASIC2.24□□□□□ -2.05
CMTM3Q96MX0 RNA5SP233-201ENST00000459153 113 ntBASIC2.24□□□□□ -2.05
CMTM3Q96MX0 AC007215.1-201ENST00000464893 276 ntBASIC2.24□□□□□ -2.05
CMTM3Q96MX0 RPS23P5-201ENST00000495419 428 ntBASIC2.24□□□□□ -2.05
CMTM3Q96MX0 HMGN1P12-201ENST00000499125 195 ntBASIC2.24□□□□□ -2.05
CMTM3Q96MX0 AC103851.1-201ENST00000506833 274 ntBASIC2.24□□□□□ -2.05
CMTM3Q96MX0 AC026782.1-201ENST00000512952 449 ntBASIC2.24□□□□□ -2.05
CMTM3Q96MX0 RNU5F-4P-201ENST00000516581 114 ntBASIC2.24□□□□□ -2.05
CMTM3Q96MX0 Y_RNA.691-201ENST00000516611 103 ntBASIC2.24□□□□□ -2.05
CMTM3Q96MX0 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC2.24□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 203 ms