Protein–RNA interactions for Protein: P39086

GRIK1, Glutamate receptor ionotropic, kainate 1, humanhuman

Predictions only

Length 918 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRIK1P39086 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC4□□□□□ -1.77
GRIK1P39086 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC4□□□□□ -1.77
GRIK1P39086 ZNF702P-202ENST00000434269 1966 ntBASIC4□□□□□ -1.77
GRIK1P39086 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC4□□□□□ -1.77
GRIK1P39086 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC4□□□□□ -1.77
GRIK1P39086 Y_RNA.294-201ENST00000364916 102 ntBASIC4□□□□□ -1.77
GRIK1P39086 SNORA36A-201ENST00000384221 132 ntBASIC4□□□□□ -1.77
GRIK1P39086 MIR549A-201ENST00000385268 96 ntBASIC4□□□□□ -1.77
GRIK1P39086 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC4□□□□□ -1.77
GRIK1P39086 SNORA40.19-201ENST00000390846 128 ntBASIC4□□□□□ -1.77
GRIK1P39086 U3.19-201ENST00000390893 196 ntBASIC4□□□□□ -1.77
GRIK1P39086 EIF4EBP2P3-201ENST00000403144 334 ntBASIC4□□□□□ -1.77
GRIK1P39086 RN7SKP53-201ENST00000411337 315 ntBASIC4□□□□□ -1.77
GRIK1P39086 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC4□□□□□ -1.77
GRIK1P39086 AL135790.2-201ENST00000437701 267 ntBASIC4□□□□□ -1.77
GRIK1P39086 RPL23AP58-201ENST00000440453 469 ntBASIC4□□□□□ -1.77
GRIK1P39086 AL078601.1-201ENST00000444542 271 ntBASIC4□□□□□ -1.77
GRIK1P39086 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC4□□□□□ -1.77
GRIK1P39086 snoU13.22-201ENST00000459428 104 ntBASIC4□□□□□ -1.77
GRIK1P39086 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC4□□□□□ -1.77
GRIK1P39086 RNU6-155P-201ENST00000516347 100 ntBASIC4□□□□□ -1.77
GRIK1P39086 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC4□□□□□ -1.77
GRIK1P39086 AC023043.3-201ENST00000593113 385 ntBASIC4□□□□□ -1.77
GRIK1P39086 AC136601.2-201ENST00000604356 474 ntBASIC4□□□□□ -1.77
GRIK1P39086 AC118273.1-201ENST00000525324 3006 ntBASIC4□□□□□ -1.77
GRIK1P39086 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC4□□□□□ -1.77
GRIK1P39086 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC4□□□□□ -1.77
GRIK1P39086 ST7-221ENST00000465133 2155 ntTSL 5 BASIC4□□□□□ -1.77
GRIK1P39086 AL353743.1-202ENST00000431724 1695 ntBASIC4□□□□□ -1.77
GRIK1P39086 AC002546.1-201ENST00000588041 2504 ntBASIC3.99□□□□□ -1.77
GRIK1P39086 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.99□□□□□ -1.77
GRIK1P39086 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
GRIK1P39086 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC3.99□□□□□ -1.77
GRIK1P39086 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC3.99□□□□□ -1.77
GRIK1P39086 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC3.99□□□□□ -1.77
GRIK1P39086 MIR423-201ENST00000362201 94 ntBASIC3.99□□□□□ -1.77
GRIK1P39086 RNU6-527P-201ENST00000363425 104 ntBASIC3.99□□□□□ -1.77
GRIK1P39086 RNU6-873P-201ENST00000363833 107 ntBASIC3.99□□□□□ -1.77
GRIK1P39086 U8.7-201ENST00000364940 136 ntBASIC3.99□□□□□ -1.77
GRIK1P39086 SNORA73.2-201ENST00000364946 201 ntBASIC3.99□□□□□ -1.77
GRIK1P39086 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC3.99□□□□□ -1.77
GRIK1P39086 PVALB-202ENST00000404171 422 ntTSL 2 BASIC3.99□□□□□ -1.77
GRIK1P39086 RHEBP3-201ENST00000411920 351 ntBASIC3.99□□□□□ -1.77
GRIK1P39086 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC3.99□□□□□ -1.77
GRIK1P39086 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC3.99□□□□□ -1.77
GRIK1P39086 snoU13.6-201ENST00000458785 104 ntBASIC3.99□□□□□ -1.77
GRIK1P39086 RPL23AP62-201ENST00000463396 453 ntBASIC3.99□□□□□ -1.77
GRIK1P39086 AC084357.1-201ENST00000473404 255 ntBASIC3.99□□□□□ -1.77
GRIK1P39086 AL121594.1-201ENST00000475906 575 ntBASIC3.99□□□□□ -1.77
GRIK1P39086 UBE2CP3-201ENST00000502715 450 ntBASIC3.99□□□□□ -1.77
GRIK1P39086 RNU2-56P-201ENST00000516826 190 ntBASIC3.99□□□□□ -1.77
GRIK1P39086 AC115990.1-201ENST00000526957 301 ntBASIC3.99□□□□□ -1.77
GRIK1P39086 MIR5187-201ENST00000583479 76 ntBASIC3.99□□□□□ -1.77
GRIK1P39086 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC3.99□□□□□ -1.77
GRIK1P39086 AF117829.1-206ENST00000621883 3802 ntBASIC3.99□□□□□ -1.77
GRIK1P39086 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
GRIK1P39086 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
GRIK1P39086 SNORD32A-201ENST00000364805 84 ntBASIC3.98□□□□□ -1.77
GRIK1P39086 Y_RNA.309-201ENST00000365046 111 ntBASIC3.98□□□□□ -1.77
GRIK1P39086 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
GRIK1P39086 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
GRIK1P39086 RNU2-68P-201ENST00000410878 191 ntBASIC3.98□□□□□ -1.77
GRIK1P39086 AC006461.1-201ENST00000412637 326 ntBASIC3.98□□□□□ -1.77
GRIK1P39086 RPL26P27-201ENST00000414397 437 ntBASIC3.98□□□□□ -1.77
GRIK1P39086 CYCSP49-201ENST00000420810 319 ntBASIC3.98□□□□□ -1.77
GRIK1P39086 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC3.98□□□□□ -1.77
GRIK1P39086 SNORA71B-202ENST00000439232 272 ntBASIC3.98□□□□□ -1.77
GRIK1P39086 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC3.98□□□□□ -1.77
GRIK1P39086 RNU6-625P-201ENST00000459412 107 ntBASIC3.98□□□□□ -1.77
GRIK1P39086 RAC1P2-201ENST00000511164 579 ntBASIC3.98□□□□□ -1.77
GRIK1P39086 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC3.98□□□□□ -1.77
GRIK1P39086 RNU5E-3P-201ENST00000515913 68 ntBASIC3.98□□□□□ -1.77
GRIK1P39086 RNU1-95P-201ENST00000516357 160 ntBASIC3.98□□□□□ -1.77
GRIK1P39086 RNU1-128P-201ENST00000516704 160 ntBASIC3.98□□□□□ -1.77
GRIK1P39086 AC109810.1-201ENST00000534066 224 ntBASIC3.98□□□□□ -1.77
GRIK1P39086 LARP7P3-201ENST00000579888 337 ntBASIC3.98□□□□□ -1.77
GRIK1P39086 AC008739.3-201ENST00000603262 127 ntBASIC3.98□□□□□ -1.77
GRIK1P39086 AC027309.3-201ENST00000623419 351 ntBASIC3.98□□□□□ -1.77
GRIK1P39086 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC3.98□□□□□ -1.77
GRIK1P39086 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
GRIK1P39086 AC134026.1-201ENST00000623249 2239 ntBASIC3.98□□□□□ -1.77
GRIK1P39086 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
GRIK1P39086 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC3.97□□□□□ -1.77
GRIK1P39086 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
GRIK1P39086 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC3.97□□□□□ -1.77
GRIK1P39086 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.97□□□□□ -1.77
GRIK1P39086 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
GRIK1P39086 RNU6-235P-201ENST00000362644 107 ntBASIC3.97□□□□□ -1.77
GRIK1P39086 Y_RNA.329-201ENST00000365209 107 ntBASIC3.97□□□□□ -1.77
GRIK1P39086 RNU6-407P-201ENST00000365280 104 ntBASIC3.97□□□□□ -1.77
GRIK1P39086 MIR449B-201ENST00000384995 97 ntBASIC3.97□□□□□ -1.77
GRIK1P39086 MIR325-201ENST00000385260 98 ntBASIC3.97□□□□□ -1.77
GRIK1P39086 SNORD37.2-201ENST00000391075 66 ntBASIC3.97□□□□□ -1.77
GRIK1P39086 SNORA26.5-201ENST00000391215 123 ntBASIC3.97□□□□□ -1.77
GRIK1P39086 RPL21P17-201ENST00000397467 475 ntBASIC3.97□□□□□ -1.77
GRIK1P39086 AL591034.1-201ENST00000407447 340 ntBASIC3.97□□□□□ -1.77
GRIK1P39086 RNU6ATAC19P-201ENST00000408096 110 ntBASIC3.97□□□□□ -1.77
GRIK1P39086 AL035423.1-201ENST00000420331 213 ntBASIC3.97□□□□□ -1.77
GRIK1P39086 SNRPEP9-201ENST00000436794 238 ntBASIC3.97□□□□□ -1.77
GRIK1P39086 AL357134.1-201ENST00000445848 426 ntBASIC3.97□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 217.2 ms