Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 MIR5688-201ENST00000580619 83 ntBASIC4.03□□□□□ -1.76
NFKB1P19838 TCL6_2.1-201ENST00000615162 119 ntBASIC4.03□□□□□ -1.76
NFKB1P19838 AC018692.3-201ENST00000623929 123 ntBASIC4.03□□□□□ -1.76
NFKB1P19838 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC4.03□□□□□ -1.76
NFKB1P19838 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
NFKB1P19838 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC4.03□□□□□ -1.77
NFKB1P19838 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC4.02□□□□□ -1.77
NFKB1P19838 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC4.02□□□□□ -1.77
NFKB1P19838 AC110774.1-201ENST00000623567 2018 ntBASIC4.02□□□□□ -1.77
NFKB1P19838 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC4.02□□□□□ -1.77
NFKB1P19838 RNU1-75P-201ENST00000347264 129 ntBASIC4.02□□□□□ -1.77
NFKB1P19838 Y_RNA.361-201ENST00000365515 120 ntBASIC4.02□□□□□ -1.77
NFKB1P19838 AC068538.1-201ENST00000376856 336 ntBASIC4.02□□□□□ -1.77
NFKB1P19838 RNU6-643P-201ENST00000384018 107 ntBASIC4.02□□□□□ -1.77
NFKB1P19838 Y_RNA.456-201ENST00000384232 111 ntBASIC4.02□□□□□ -1.77
NFKB1P19838 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC4.02□□□□□ -1.77
NFKB1P19838 AC004386.2-201ENST00000441858 148 ntBASIC4.02□□□□□ -1.77
NFKB1P19838 TPT1P12-201ENST00000448968 492 ntBASIC4.02□□□□□ -1.77
NFKB1P19838 AL121914.1-201ENST00000450188 156 ntBASIC4.02□□□□□ -1.77
NFKB1P19838 AC245047.8-201ENST00000456455 284 ntBASIC4.02□□□□□ -1.77
NFKB1P19838 AC107626.1-201ENST00000471084 183 ntBASIC4.02□□□□□ -1.77
NFKB1P19838 YWHAEP4-201ENST00000505390 198 ntBASIC4.02□□□□□ -1.77
NFKB1P19838 AC026726.1-201ENST00000512859 601 ntBASIC4.02□□□□□ -1.77
NFKB1P19838 RNU4-57P-201ENST00000515980 135 ntBASIC4.02□□□□□ -1.77
NFKB1P19838 RN7SKP289-201ENST00000517244 295 ntBASIC4.02□□□□□ -1.77
NFKB1P19838 RNA5SP179-201ENST00000517284 121 ntBASIC4.02□□□□□ -1.77
NFKB1P19838 EIF4A1P12-201ENST00000551910 141 ntBASIC4.02□□□□□ -1.77
NFKB1P19838 HMGN2P15-201ENST00000585707 270 ntBASIC4.02□□□□□ -1.77
NFKB1P19838 AL020997.2-201ENST00000602607 184 ntBASIC4.02□□□□□ -1.77
NFKB1P19838 AC091167.4-201ENST00000605079 184 ntBASIC4.02□□□□□ -1.77
NFKB1P19838 AL110115.1-201ENST00000614396 364 ntBASIC4.02□□□□□ -1.77
NFKB1P19838 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC4.02□□□□□ -1.77
NFKB1P19838 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
NFKB1P19838 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC4.01□□□□□ -1.77
NFKB1P19838 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
NFKB1P19838 IPO8P1-201ENST00000455509 3109 ntBASIC4.01□□□□□ -1.77
NFKB1P19838 Y_RNA.310-201ENST00000365063 113 ntBASIC4.01□□□□□ -1.77
NFKB1P19838 RNA5-8SP4-201ENST00000365096 150 ntBASIC4.01□□□□□ -1.77
NFKB1P19838 RNU6-407P-201ENST00000365280 104 ntBASIC4.01□□□□□ -1.77
NFKB1P19838 SNORA62-201ENST00000365493 153 ntBASIC4.01□□□□□ -1.77
NFKB1P19838 Y_RNA.563-201ENST00000384707 108 ntBASIC4.01□□□□□ -1.77
NFKB1P19838 MIR15B-201ENST00000385045 98 ntBASIC4.01□□□□□ -1.77
NFKB1P19838 RNA5SP317-201ENST00000410176 116 ntBASIC4.01□□□□□ -1.77
NFKB1P19838 RNA5SP311-201ENST00000411290 116 ntBASIC4.01□□□□□ -1.77
NFKB1P19838 PTGES3P4-201ENST00000426243 356 ntBASIC4.01□□□□□ -1.77
NFKB1P19838 AC027124.2-201ENST00000428249 105 ntBASIC4.01□□□□□ -1.77
NFKB1P19838 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC4.01□□□□□ -1.77
NFKB1P19838 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC4.01□□□□□ -1.77
NFKB1P19838 snoU13.14-201ENST00000459372 104 ntBASIC4.01□□□□□ -1.77
NFKB1P19838 RN7SL385P-201ENST00000468873 276 ntBASIC4.01□□□□□ -1.77
NFKB1P19838 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC4.01□□□□□ -1.77
NFKB1P19838 RNA5SP315-201ENST00000516340 116 ntBASIC4.01□□□□□ -1.77
NFKB1P19838 RNU6-659P-201ENST00000516454 104 ntBASIC4.01□□□□□ -1.77
NFKB1P19838 RNU4ATAC6P-201ENST00000516592 126 ntBASIC4.01□□□□□ -1.77
NFKB1P19838 RNA5SP312-201ENST00000517068 116 ntBASIC4.01□□□□□ -1.77
NFKB1P19838 YPEL5P3-201ENST00000547227 352 ntBASIC4.01□□□□□ -1.77
NFKB1P19838 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC4.01□□□□□ -1.77
NFKB1P19838 AL354798.1-201ENST00000622505 329 ntBASIC4.01□□□□□ -1.77
NFKB1P19838 AC112484.5-201ENST00000624189 228 ntBASIC4.01□□□□□ -1.77
NFKB1P19838 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC4.01□□□□□ -1.77
NFKB1P19838 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
NFKB1P19838 AC018555.1-201ENST00000567548 1980 ntBASIC4.01□□□□□ -1.77
NFKB1P19838 UBE3AP2-201ENST00000429033 2259 ntBASIC4.01□□□□□ -1.77
NFKB1P19838 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
NFKB1P19838 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC4□□□□□ -1.77
NFKB1P19838 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC4□□□□□ -1.77
NFKB1P19838 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC4□□□□□ -1.77
NFKB1P19838 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC4□□□□□ -1.77
NFKB1P19838 Y_RNA.40-201ENST00000362645 93 ntBASIC4□□□□□ -1.77
NFKB1P19838 RNU6-1205P-201ENST00000363625 106 ntBASIC4□□□□□ -1.77
NFKB1P19838 Y_RNA.341-201ENST00000365341 102 ntBASIC4□□□□□ -1.77
NFKB1P19838 RNU6-1056P-201ENST00000383996 107 ntBASIC4□□□□□ -1.77
NFKB1P19838 U1.1-201ENST00000384101 164 ntBASIC4□□□□□ -1.77
NFKB1P19838 RNU6-748P-201ENST00000384648 107 ntBASIC4□□□□□ -1.77
NFKB1P19838 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC4□□□□□ -1.77
NFKB1P19838 RNU7-141P-201ENST00000459304 62 ntBASIC4□□□□□ -1.77
NFKB1P19838 AC091179.1-201ENST00000461606 579 ntBASIC4□□□□□ -1.77
NFKB1P19838 AC091153.1-201ENST00000466297 402 ntBASIC4□□□□□ -1.77
NFKB1P19838 APOA2-205ENST00000468465 421 ntTSL 2 BASIC4□□□□□ -1.77
NFKB1P19838 AC092991.1-201ENST00000477176 376 ntBASIC4□□□□□ -1.77
NFKB1P19838 AC146944.2-203ENST00000502493 354 ntBASIC4□□□□□ -1.77
NFKB1P19838 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC4□□□□□ -1.77
NFKB1P19838 AC006445.2-201ENST00000510061 472 ntBASIC4□□□□□ -1.77
NFKB1P19838 AC139495.1-202ENST00000513164 354 ntBASIC4□□□□□ -1.77
NFKB1P19838 RNU1-117P-201ENST00000517041 158 ntBASIC4□□□□□ -1.77
NFKB1P19838 IGKV2OR2-8-201ENST00000558710 300 ntBASIC4□□□□□ -1.77
NFKB1P19838 MIR3646-201ENST00000578301 84 ntBASIC4□□□□□ -1.77
NFKB1P19838 RPS15AP11-201ENST00000594193 385 ntBASIC4□□□□□ -1.77
NFKB1P19838 RNU6-91P-201ENST00000607774 107 ntBASIC4□□□□□ -1.77
NFKB1P19838 AC011603.4-201ENST00000611325 277 ntBASIC4□□□□□ -1.77
NFKB1P19838 uc_338.32-201ENST00000615087 172 ntBASIC4□□□□□ -1.77
NFKB1P19838 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC4□□□□□ -1.77
NFKB1P19838 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC4□□□□□ -1.77
NFKB1P19838 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC4□□□□□ -1.77
NFKB1P19838 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC4□□□□□ -1.77
NFKB1P19838 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC4□□□□□ -1.77
NFKB1P19838 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC4□□□□□ -1.77
NFKB1P19838 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC3.99□□□□□ -1.77
NFKB1P19838 RNU6-1010P-201ENST00000362757 107 ntBASIC3.99□□□□□ -1.77
NFKB1P19838 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 191.6 ms