Protein–RNA interactions for Protein: O60500

NPHS1, Nephrin, humanhuman

Predictions only

Length 1,241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHS1O60500 AC005520.5-201ENST00000613926 164 ntBASIC3.44□□□□□ -1.86
NPHS1O60500 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.44□□□□□ -1.86
NPHS1O60500 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
NPHS1O60500 AL109809.4-201ENST00000603520 2185 ntBASIC3.44□□□□□ -1.86
NPHS1O60500 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.44□□□□□ -1.86
NPHS1O60500 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
NPHS1O60500 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC3.43□□□□□ -1.86
NPHS1O60500 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.43□□□□□ -1.86
NPHS1O60500 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.43□□□□□ -1.86
NPHS1O60500 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
NPHS1O60500 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.43□□□□□ -1.86
NPHS1O60500 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.43□□□□□ -1.86
NPHS1O60500 AL513302.2-201ENST00000562313 1842 ntBASIC3.43□□□□□ -1.86
NPHS1O60500 UBE2WP1-201ENST00000362030 340 ntBASIC3.43□□□□□ -1.86
NPHS1O60500 RNU6-47P-201ENST00000383866 107 ntBASIC3.43□□□□□ -1.86
NPHS1O60500 RNU6-1289P-201ENST00000384431 106 ntBASIC3.43□□□□□ -1.86
NPHS1O60500 RNU6-750P-201ENST00000390946 107 ntBASIC3.43□□□□□ -1.86
NPHS1O60500 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC3.43□□□□□ -1.86
NPHS1O60500 AC005042.3-201ENST00000453230 174 ntBASIC3.43□□□□□ -1.86
NPHS1O60500 AL441985.1-201ENST00000457727 251 ntBASIC3.43□□□□□ -1.86
NPHS1O60500 CENPBD1P1-201ENST00000464061 469 ntBASIC3.43□□□□□ -1.86
NPHS1O60500 COX6CP14-201ENST00000469580 174 ntBASIC3.43□□□□□ -1.86
NPHS1O60500 AC026402.1-201ENST00000513642 170 ntBASIC3.43□□□□□ -1.86
NPHS1O60500 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC3.43□□□□□ -1.86
NPHS1O60500 AL356575.1-201ENST00000603008 283 ntBASIC3.43□□□□□ -1.86
NPHS1O60500 ZYXP1-201ENST00000617638 118 ntBASIC3.43□□□□□ -1.86
NPHS1O60500 AC092628.2-201ENST00000622492 339 ntBASIC3.43□□□□□ -1.86
NPHS1O60500 AC091932.3-201ENST00000624223 323 ntBASIC3.43□□□□□ -1.86
NPHS1O60500 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC3.43□□□□□ -1.86
NPHS1O60500 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
NPHS1O60500 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
NPHS1O60500 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC3.43□□□□□ -1.86
NPHS1O60500 AC099654.7-201ENST00000635788 2127 ntBASIC3.43□□□□□ -1.86
NPHS1O60500 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.43□□□□□ -1.86
NPHS1O60500 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.43□□□□□ -1.86
NPHS1O60500 AL021368.2-201ENST00000606125 5352 ntBASIC3.43□□□□□ -1.86
NPHS1O60500 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
NPHS1O60500 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC3.42□□□□□ -1.86
NPHS1O60500 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
NPHS1O60500 AC010680.1-201ENST00000590024 3590 ntBASIC3.42□□□□□ -1.86
NPHS1O60500 RNU6-1010P-201ENST00000362757 107 ntBASIC3.42□□□□□ -1.86
NPHS1O60500 Y_RNA.82-201ENST00000363000 102 ntBASIC3.42□□□□□ -1.86
NPHS1O60500 Y_RNA.92-201ENST00000363043 102 ntBASIC3.42□□□□□ -1.86
NPHS1O60500 SNORD114-19-201ENST00000363072 75 ntBASIC3.42□□□□□ -1.86
NPHS1O60500 RNU6-774P-201ENST00000363238 107 ntBASIC3.42□□□□□ -1.86
NPHS1O60500 Y_RNA.235-201ENST00000364412 102 ntBASIC3.42□□□□□ -1.86
NPHS1O60500 Y_RNA.306-201ENST00000365015 102 ntBASIC3.42□□□□□ -1.86
NPHS1O60500 Y_RNA.312-201ENST00000365089 102 ntBASIC3.42□□□□□ -1.86
NPHS1O60500 Y_RNA.322-201ENST00000365151 102 ntBASIC3.42□□□□□ -1.86
NPHS1O60500 RNU6-662P-201ENST00000384253 104 ntBASIC3.42□□□□□ -1.86
NPHS1O60500 MIR147B-201ENST00000390185 80 ntBASIC3.42□□□□□ -1.86
NPHS1O60500 RNU6-493P-201ENST00000391321 108 ntBASIC3.42□□□□□ -1.86
NPHS1O60500 AC093578.1-201ENST00000415219 368 ntBASIC3.42□□□□□ -1.86
NPHS1O60500 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC3.42□□□□□ -1.86
NPHS1O60500 COX6CP10-201ENST00000416832 224 ntBASIC3.42□□□□□ -1.86
NPHS1O60500 AIMP1P2-201ENST00000425294 312 ntBASIC3.42□□□□□ -1.86
NPHS1O60500 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC3.42□□□□□ -1.86
NPHS1O60500 IFNA11P-201ENST00000446352 526 ntBASIC3.42□□□□□ -1.86
NPHS1O60500 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC3.42□□□□□ -1.86
NPHS1O60500 Y_RNA.650-201ENST00000459002 102 ntBASIC3.42□□□□□ -1.86
NPHS1O60500 Y_RNA.638-201ENST00000459374 113 ntBASIC3.42□□□□□ -1.86
NPHS1O60500 RPL23AP67-201ENST00000465341 474 ntBASIC3.42□□□□□ -1.86
NPHS1O60500 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC3.42□□□□□ -1.86
NPHS1O60500 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC3.42□□□□□ -1.86
NPHS1O60500 Y_RNA.777-201ENST00000516982 102 ntBASIC3.42□□□□□ -1.86
NPHS1O60500 RNU6-711P-201ENST00000517255 106 ntBASIC3.42□□□□□ -1.86
NPHS1O60500 AC087441.2-201ENST00000529141 262 ntBASIC3.42□□□□□ -1.86
NPHS1O60500 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC3.42□□□□□ -1.86
NPHS1O60500 Y_RNA.771-201ENST00000598668 102 ntBASIC3.42□□□□□ -1.86
NPHS1O60500 AC004467.1-201ENST00000615678 330 ntBASIC3.42□□□□□ -1.86
NPHS1O60500 MIR6875-201ENST00000617506 72 ntBASIC3.42□□□□□ -1.86
NPHS1O60500 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC3.42□□□□□ -1.86
NPHS1O60500 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.42□□□□□ -1.86
NPHS1O60500 Y_RNA.789-201ENST00000622480 102 ntBASIC3.42□□□□□ -1.86
NPHS1O60500 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.42□□□□□ -1.86
NPHS1O60500 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.42□□□□□ -1.86
NPHS1O60500 AC007496.3-201ENST00000624987 3443 ntBASIC3.41□□□□□ -1.86
NPHS1O60500 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
NPHS1O60500 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.41□□□□□ -1.86
NPHS1O60500 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC3.41□□□□□ -1.86
NPHS1O60500 RNU6-545P-201ENST00000362681 104 ntBASIC3.41□□□□□ -1.86
NPHS1O60500 RNU6-682P-201ENST00000363843 106 ntBASIC3.41□□□□□ -1.86
NPHS1O60500 SNORA46.1-201ENST00000391069 153 ntBASIC3.41□□□□□ -1.86
NPHS1O60500 RN7SKP156-201ENST00000410308 342 ntBASIC3.41□□□□□ -1.86
NPHS1O60500 RNU6-1077P-201ENST00000410506 102 ntBASIC3.41□□□□□ -1.86
NPHS1O60500 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC3.41□□□□□ -1.86
NPHS1O60500 AC004975.1-201ENST00000428733 208 ntBASIC3.41□□□□□ -1.86
NPHS1O60500 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.41□□□□□ -1.86
NPHS1O60500 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC3.41□□□□□ -1.86
NPHS1O60500 RN7SL330P-201ENST00000469709 307 ntBASIC3.41□□□□□ -1.86
NPHS1O60500 RN7SL442P-201ENST00000473804 320 ntBASIC3.41□□□□□ -1.86
NPHS1O60500 AL049830.2-201ENST00000480072 201 ntBASIC3.41□□□□□ -1.86
NPHS1O60500 RPL23AP70-201ENST00000483361 460 ntBASIC3.41□□□□□ -1.86
NPHS1O60500 AC107934.2-201ENST00000518653 310 ntBASIC3.41□□□□□ -1.86
NPHS1O60500 AC022559.1-201ENST00000520905 205 ntBASIC3.41□□□□□ -1.86
NPHS1O60500 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC3.41□□□□□ -1.86
NPHS1O60500 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC3.41□□□□□ -1.86
NPHS1O60500 AP002001.1-203ENST00000534002 267 ntBASIC3.41□□□□□ -1.86
NPHS1O60500 MIR4286-201ENST00000580651 93 ntBASIC3.41□□□□□ -1.86
NPHS1O60500 Z83818.1-201ENST00000603584 150 ntBASIC3.41□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 208.8 ms