Protein–RNA interactions for Protein: Q96T60

PNKP, Bifunctional polynucleotide phosphatase/kinase, humanhuman

Predictions only

Length 521 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PNKPQ96T60 RPS29P30-201ENST00000600975 111 ntBASIC3.18□□□□□ -1.9
PNKPQ96T60 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
PNKPQ96T60 AC091152.2-201ENST00000591628 2569 ntBASIC3.18□□□□□ -1.9
PNKPQ96T60 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC3.18□□□□□ -1.9
PNKPQ96T60 AC002546.1-201ENST00000588041 2504 ntBASIC3.18□□□□□ -1.9
PNKPQ96T60 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
PNKPQ96T60 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
PNKPQ96T60 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
PNKPQ96T60 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
PNKPQ96T60 RNU4-50P-201ENST00000364361 141 ntBASIC3.17□□□□□ -1.9
PNKPQ96T60 RNU6-806P-201ENST00000365147 105 ntBASIC3.17□□□□□ -1.9
PNKPQ96T60 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
PNKPQ96T60 AL714022.1-201ENST00000439897 151 ntBASIC3.17□□□□□ -1.9
PNKPQ96T60 AC025750.2-201ENST00000442609 450 ntBASIC3.17□□□□□ -1.9
PNKPQ96T60 AL353705.4-201ENST00000449661 238 ntBASIC3.17□□□□□ -1.9
PNKPQ96T60 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC3.17□□□□□ -1.9
PNKPQ96T60 PCNPP5-201ENST00000452246 481 ntBASIC3.17□□□□□ -1.9
PNKPQ96T60 snoU13.30-201ENST00000458951 104 ntBASIC3.17□□□□□ -1.9
PNKPQ96T60 U8.22-201ENST00000459141 133 ntBASIC3.17□□□□□ -1.9
PNKPQ96T60 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC3.17□□□□□ -1.9
PNKPQ96T60 AC109329.1-201ENST00000518744 317 ntBASIC3.17□□□□□ -1.9
PNKPQ96T60 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC3.17□□□□□ -1.9
PNKPQ96T60 AC023043.3-201ENST00000593113 385 ntBASIC3.17□□□□□ -1.9
PNKPQ96T60 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.17□□□□□ -1.9
PNKPQ96T60 AC007318.2-201ENST00000620999 243 ntBASIC3.17□□□□□ -1.9
PNKPQ96T60 MIR3199-2-201ENST00000636243 86 ntBASIC3.17□□□□□ -1.9
PNKPQ96T60 IL33-203ENST00000456383 2501 ntTSL 5 BASIC3.17□□□□□ -1.9
PNKPQ96T60 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
PNKPQ96T60 MIR22-201ENST00000362190 85 ntBASIC3.16□□□□□ -1.9
PNKPQ96T60 RNU4-9P-201ENST00000364951 139 ntBASIC3.16□□□□□ -1.9
PNKPQ96T60 SNORA63.7-201ENST00000365579 123 ntBASIC3.16□□□□□ -1.9
PNKPQ96T60 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC3.16□□□□□ -1.9
PNKPQ96T60 RNU6-1286P-201ENST00000383871 107 ntBASIC3.16□□□□□ -1.9
PNKPQ96T60 Y_RNA.396-201ENST00000383949 103 ntBASIC3.16□□□□□ -1.9
PNKPQ96T60 SNORA54-201ENST00000384281 123 ntBASIC3.16□□□□□ -1.9
PNKPQ96T60 Y_RNA.471-201ENST00000384312 102 ntBASIC3.16□□□□□ -1.9
PNKPQ96T60 Y_RNA.526-201ENST00000384572 110 ntBASIC3.16□□□□□ -1.9
PNKPQ96T60 RNU6-1222P-201ENST00000384615 107 ntBASIC3.16□□□□□ -1.9
PNKPQ96T60 MIR181A2-201ENST00000384863 110 ntBASIC3.16□□□□□ -1.9
PNKPQ96T60 SNORD88.1-201ENST00000408684 91 ntBASIC3.16□□□□□ -1.9
PNKPQ96T60 RNA5SP38-201ENST00000410750 119 ntBASIC3.16□□□□□ -1.9
PNKPQ96T60 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC3.16□□□□□ -1.9
PNKPQ96T60 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC3.16□□□□□ -1.9
PNKPQ96T60 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC3.16□□□□□ -1.9
PNKPQ96T60 TRIAP1P1-201ENST00000427062 225 ntBASIC3.16□□□□□ -1.9
PNKPQ96T60 CBX3P6-201ENST00000430257 527 ntBASIC3.16□□□□□ -1.9
PNKPQ96T60 SETP5-201ENST00000437270 562 ntBASIC3.16□□□□□ -1.9
PNKPQ96T60 AC009296.1-201ENST00000443146 155 ntBASIC3.16□□□□□ -1.9
PNKPQ96T60 SSXP4-201ENST00000451349 245 ntBASIC3.16□□□□□ -1.9
PNKPQ96T60 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC3.16□□□□□ -1.9
PNKPQ96T60 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC3.16□□□□□ -1.9
PNKPQ96T60 AC091179.1-201ENST00000461606 579 ntBASIC3.16□□□□□ -1.9
PNKPQ96T60 AP001025.1-201ENST00000486139 332 ntBASIC3.16□□□□□ -1.9
PNKPQ96T60 SNORA25.11-201ENST00000515935 105 ntBASIC3.16□□□□□ -1.9
PNKPQ96T60 RNY3P15-201ENST00000516297 97 ntBASIC3.16□□□□□ -1.9
PNKPQ96T60 ACA59.2-201ENST00000517061 156 ntBASIC3.16□□□□□ -1.9
PNKPQ96T60 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC3.16□□□□□ -1.9
PNKPQ96T60 MIR4513-201ENST00000581077 86 ntBASIC3.16□□□□□ -1.9
PNKPQ96T60 AL390123.1-201ENST00000603216 237 ntBASIC3.16□□□□□ -1.9
PNKPQ96T60 DLEU2_2.2-201ENST00000615474 90 ntBASIC3.16□□□□□ -1.9
PNKPQ96T60 AC068831.7-201ENST00000616954 363 ntBASIC3.16□□□□□ -1.9
PNKPQ96T60 SNORA43.4-201ENST00000629559 138 ntBASIC3.16□□□□□ -1.9
PNKPQ96T60 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC3.16□□□□□ -1.9
PNKPQ96T60 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC3.16□□□□□ -1.9
PNKPQ96T60 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC3.16□□□□□ -1.9
PNKPQ96T60 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC3.15□□□□□ -1.9
PNKPQ96T60 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC3.15□□□□□ -1.9
PNKPQ96T60 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC3.15□□□□□ -1.9
PNKPQ96T60 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC3.15□□□□□ -1.9
PNKPQ96T60 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC3.15□□□□□ -1.9
PNKPQ96T60 Z75746.1-201ENST00000440243 2080 ntBASIC3.15□□□□□ -1.9
PNKPQ96T60 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.15□□□□□ -1.9
PNKPQ96T60 Y_RNA.64-201ENST00000362845 102 ntBASIC3.15□□□□□ -1.91
PNKPQ96T60 RNU6-198P-201ENST00000384258 104 ntBASIC3.15□□□□□ -1.91
PNKPQ96T60 SNORA48.8-201ENST00000391324 134 ntBASIC3.15□□□□□ -1.91
PNKPQ96T60 RPL21P75-201ENST00000396599 483 ntBASIC3.15□□□□□ -1.91
PNKPQ96T60 RPL21P28-201ENST00000401418 483 ntBASIC3.15□□□□□ -1.91
PNKPQ96T60 AP000567.1-201ENST00000406413 156 ntBASIC3.15□□□□□ -1.91
PNKPQ96T60 MIR1289-1-201ENST00000408836 144 ntBASIC3.15□□□□□ -1.91
PNKPQ96T60 AL590556.1-201ENST00000423231 483 ntBASIC3.15□□□□□ -1.91
PNKPQ96T60 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC3.15□□□□□ -1.91
PNKPQ96T60 RPL23AP95-201ENST00000426806 265 ntBASIC3.15□□□□□ -1.91
PNKPQ96T60 RPL21P40-201ENST00000428586 483 ntBASIC3.15□□□□□ -1.91
PNKPQ96T60 RPL39P40-201ENST00000445481 146 ntBASIC3.15□□□□□ -1.91
PNKPQ96T60 RPL21P39-201ENST00000463605 483 ntBASIC3.15□□□□□ -1.91
PNKPQ96T60 UBE2DNL-203ENST00000474922 222 ntBASIC3.15□□□□□ -1.91
PNKPQ96T60 AC087190.1-201ENST00000484462 480 ntBASIC3.15□□□□□ -1.91
PNKPQ96T60 AC107032.1-201ENST00000485945 480 ntBASIC3.15□□□□□ -1.91
PNKPQ96T60 AC132942.1-201ENST00000486753 483 ntBASIC3.15□□□□□ -1.91
PNKPQ96T60 AC093591.1-201ENST00000491435 481 ntBASIC3.15□□□□□ -1.91
PNKPQ96T60 AF186996.7-201ENST00000492781 209 ntBASIC3.15□□□□□ -1.91
PNKPQ96T60 AC104564.1-201ENST00000493028 407 ntBASIC3.15□□□□□ -1.91
PNKPQ96T60 RPL21P16-201ENST00000495531 483 ntBASIC3.15□□□□□ -1.91
PNKPQ96T60 AKIRIN2P1-201ENST00000505898 352 ntBASIC3.15□□□□□ -1.91
PNKPQ96T60 RNU6-897P-201ENST00000517135 105 ntBASIC3.15□□□□□ -1.91
PNKPQ96T60 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC3.15□□□□□ -1.91
PNKPQ96T60 AC125232.2-201ENST00000592457 143 ntBASIC3.15□□□□□ -1.91
PNKPQ96T60 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC3.15□□□□□ -1.91
PNKPQ96T60 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC3.15□□□□□ -1.91
PNKPQ96T60 AL033523.1-201ENST00000605153 153 ntBASIC3.15□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 259 ms