Protein–RNA interactions for Protein: P54753

EPHB3, Ephrin type-B receptor 3, humanhuman

Predictions only

Length 998 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3P54753 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC3.63□□□□□ -1.83
EPHB3P54753 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.63□□□□□ -1.83
EPHB3P54753 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC3.63□□□□□ -1.83
EPHB3P54753 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.63□□□□□ -1.83
EPHB3P54753 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
EPHB3P54753 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
EPHB3P54753 RNU6-50P-201ENST00000362356 103 ntBASIC3.63□□□□□ -1.83
EPHB3P54753 RNU6-527P-201ENST00000363425 104 ntBASIC3.63□□□□□ -1.83
EPHB3P54753 RNA5SP322-201ENST00000363617 119 ntBASIC3.63□□□□□ -1.83
EPHB3P54753 RNA5SP42-201ENST00000364278 115 ntBASIC3.63□□□□□ -1.83
EPHB3P54753 SNORD32A-201ENST00000364805 84 ntBASIC3.63□□□□□ -1.83
EPHB3P54753 Y_RNA.331-201ENST00000365267 102 ntBASIC3.63□□□□□ -1.83
EPHB3P54753 Y_RNA.497-201ENST00000384447 98 ntBASIC3.63□□□□□ -1.83
EPHB3P54753 RNU1-89P-201ENST00000384592 164 ntBASIC3.63□□□□□ -1.83
EPHB3P54753 Y_RNA.568-201ENST00000384742 113 ntBASIC3.63□□□□□ -1.83
EPHB3P54753 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
EPHB3P54753 RNU6-1168P-201ENST00000390831 104 ntBASIC3.63□□□□□ -1.83
EPHB3P54753 RNU6-159P-201ENST00000391080 106 ntBASIC3.63□□□□□ -1.83
EPHB3P54753 Z98941.1-201ENST00000407764 100 ntBASIC3.63□□□□□ -1.83
EPHB3P54753 RNA5SP129-201ENST00000410276 118 ntBASIC3.63□□□□□ -1.83
EPHB3P54753 ATP6V0E1P4-201ENST00000427294 242 ntBASIC3.63□□□□□ -1.83
EPHB3P54753 AC017083.1-201ENST00000428093 483 ntBASIC3.63□□□□□ -1.83
EPHB3P54753 AL162725.1-201ENST00000435405 301 ntBASIC3.63□□□□□ -1.83
EPHB3P54753 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC3.63□□□□□ -1.83
EPHB3P54753 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC3.63□□□□□ -1.83
EPHB3P54753 SNRPGP3-201ENST00000469405 227 ntBASIC3.63□□□□□ -1.83
EPHB3P54753 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC3.63□□□□□ -1.83
EPHB3P54753 AC140059.1-201ENST00000489238 361 ntBASIC3.63□□□□□ -1.83
EPHB3P54753 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC3.63□□□□□ -1.83
EPHB3P54753 AC091874.1-201ENST00000511402 339 ntBASIC3.63□□□□□ -1.83
EPHB3P54753 RN7SKP57-201ENST00000517248 293 ntBASIC3.63□□□□□ -1.83
EPHB3P54753 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC3.63□□□□□ -1.83
EPHB3P54753 AL391261.3-201ENST00000557194 520 ntBASIC3.63□□□□□ -1.83
EPHB3P54753 CYCSP39-201ENST00000565821 309 ntBASIC3.63□□□□□ -1.83
EPHB3P54753 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC3.63□□□□□ -1.83
EPHB3P54753 MIR5695-201ENST00000579717 85 ntBASIC3.63□□□□□ -1.83
EPHB3P54753 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC3.63□□□□□ -1.83
EPHB3P54753 AC136601.2-201ENST00000604356 474 ntBASIC3.63□□□□□ -1.83
EPHB3P54753 AL356157.2-201ENST00000605122 111 ntBASIC3.63□□□□□ -1.83
EPHB3P54753 SNORA43.4-201ENST00000629559 138 ntBASIC3.63□□□□□ -1.83
EPHB3P54753 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC3.63□□□□□ -1.83
EPHB3P54753 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
EPHB3P54753 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
EPHB3P54753 AC006504.1-201ENST00000562493 3666 ntBASIC3.63□□□□□ -1.83
EPHB3P54753 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.62□□□□□ -1.83
EPHB3P54753 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC3.62□□□□□ -1.83
EPHB3P54753 RNU6-653P-201ENST00000363074 106 ntBASIC3.62□□□□□ -1.83
EPHB3P54753 SNORD115-8-201ENST00000363856 82 ntBASIC3.62□□□□□ -1.83
EPHB3P54753 SNORD115-38-201ENST00000365037 82 ntBASIC3.62□□□□□ -1.83
EPHB3P54753 SNORA22C-201ENST00000384614 134 ntBASIC3.62□□□□□ -1.83
EPHB3P54753 RNU6-541P-201ENST00000384709 110 ntBASIC3.62□□□□□ -1.83
EPHB3P54753 RNU6-131P-201ENST00000391144 107 ntBASIC3.62□□□□□ -1.83
EPHB3P54753 RHEBP3-201ENST00000411920 351 ntBASIC3.62□□□□□ -1.83
EPHB3P54753 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.62□□□□□ -1.83
EPHB3P54753 SNRPEP9-201ENST00000436794 238 ntBASIC3.62□□□□□ -1.83
EPHB3P54753 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC3.62□□□□□ -1.83
EPHB3P54753 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC3.62□□□□□ -1.83
EPHB3P54753 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC3.62□□□□□ -1.83
EPHB3P54753 RNU6-703P-201ENST00000516946 107 ntBASIC3.62□□□□□ -1.83
EPHB3P54753 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.62□□□□□ -1.83
EPHB3P54753 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC3.62□□□□□ -1.83
EPHB3P54753 AP002826.1-201ENST00000608835 315 ntBASIC3.62□□□□□ -1.83
EPHB3P54753 AC006001.4-201ENST00000622243 395 ntBASIC3.62□□□□□ -1.83
EPHB3P54753 AL109809.4-201ENST00000603520 2185 ntBASIC3.62□□□□□ -1.83
EPHB3P54753 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3.62□□□□□ -1.83
EPHB3P54753 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.62□□□□□ -1.83
EPHB3P54753 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC3.61□□□□□ -1.83
EPHB3P54753 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
EPHB3P54753 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
EPHB3P54753 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
EPHB3P54753 Z83843.1-201ENST00000604070 3685 ntBASIC3.61□□□□□ -1.83
EPHB3P54753 AF127577.6-201ENST00000623352 2191 ntBASIC3.61□□□□□ -1.83
EPHB3P54753 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
EPHB3P54753 RNU6-942P-201ENST00000363002 107 ntBASIC3.61□□□□□ -1.83
EPHB3P54753 Z98749.2-208ENST00000381646 500 ntBASIC3.61□□□□□ -1.83
EPHB3P54753 Y_RNA.400-201ENST00000383963 111 ntBASIC3.61□□□□□ -1.83
EPHB3P54753 MIR518D-201ENST00000385014 87 ntBASIC3.61□□□□□ -1.83
EPHB3P54753 AL357139.1-201ENST00000407792 426 ntBASIC3.61□□□□□ -1.83
EPHB3P54753 RNU6ATAC10P-201ENST00000408635 111 ntBASIC3.61□□□□□ -1.83
EPHB3P54753 AL590383.1-201ENST00000428602 75 ntBASIC3.61□□□□□ -1.83
EPHB3P54753 WARS2P1-201ENST00000429678 537 ntBASIC3.61□□□□□ -1.83
EPHB3P54753 RPL23AP3-201ENST00000453844 468 ntBASIC3.61□□□□□ -1.83
EPHB3P54753 DCLRE1CP1-201ENST00000454630 470 ntBASIC3.61□□□□□ -1.83
EPHB3P54753 RNU6-58P-201ENST00000517143 103 ntBASIC3.61□□□□□ -1.83
EPHB3P54753 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC3.61□□□□□ -1.83
EPHB3P54753 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC3.61□□□□□ -1.83
EPHB3P54753 UBL5P4-201ENST00000562584 236 ntBASIC3.61□□□□□ -1.83
EPHB3P54753 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC3.61□□□□□ -1.83
EPHB3P54753 MIR4276-201ENST00000584832 70 ntBASIC3.61□□□□□ -1.83
EPHB3P54753 AC005176.2-201ENST00000596933 147 ntBASIC3.61□□□□□ -1.83
EPHB3P54753 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC3.61□□□□□ -1.83
EPHB3P54753 MIR486-1-201ENST00000612171 68 ntBASIC3.61□□□□□ -1.83
EPHB3P54753 UBE2Q2P6-201ENST00000612666 153 ntBASIC3.61□□□□□ -1.83
EPHB3P54753 U6.99-201ENST00000637524 83 ntBASIC3.61□□□□□ -1.83
EPHB3P54753 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
EPHB3P54753 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC3.61□□□□□ -1.83
EPHB3P54753 AC118273.1-201ENST00000525324 3006 ntBASIC3.61□□□□□ -1.83
EPHB3P54753 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC3.61□□□□□ -1.83
EPHB3P54753 OFD1P6Y-202ENST00000451061 2724 ntBASIC3.61□□□□□ -1.83
EPHB3P54753 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC3.61□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 196.5 ms