Protein–RNA interactions for Protein: O60500

NPHS1, Nephrin, humanhuman

Predictions only

Length 1,241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHS1O60500 SNORA70.19-201ENST00000516717 90 ntBASIC3.47□□□□□ -1.85
NPHS1O60500 MIR2116-201ENST00000517221 80 ntBASIC3.47□□□□□ -1.85
NPHS1O60500 RPL21P9-201ENST00000556149 474 ntBASIC3.47□□□□□ -1.85
NPHS1O60500 AC233702.2-202ENST00000562547 291 ntBASIC3.47□□□□□ -1.85
NPHS1O60500 MIR3186-201ENST00000577404 85 ntBASIC3.47□□□□□ -1.85
NPHS1O60500 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC3.47□□□□□ -1.85
NPHS1O60500 TEX41-243ENST00000614173 190 ntTSL 5 BASIC3.47□□□□□ -1.85
NPHS1O60500 AC006111.3-201ENST00000622137 383 ntBASIC3.47□□□□□ -1.85
NPHS1O60500 AP003355.3-201ENST00000623465 114 ntBASIC3.47□□□□□ -1.85
NPHS1O60500 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC3.47□□□□□ -1.85
NPHS1O60500 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
NPHS1O60500 AC010889.1-201ENST00000566193 2666 ntBASIC3.47□□□□□ -1.85
NPHS1O60500 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.47□□□□□ -1.85
NPHS1O60500 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.46□□□□□ -1.86
NPHS1O60500 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC3.46□□□□□ -1.86
NPHS1O60500 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
NPHS1O60500 BX322639.1-202ENST00000423987 2213 ntBASIC3.46□□□□□ -1.86
NPHS1O60500 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.46□□□□□ -1.86
NPHS1O60500 RNU1-75P-201ENST00000347264 129 ntBASIC3.46□□□□□ -1.86
NPHS1O60500 RNA5SP197-201ENST00000363357 119 ntBASIC3.46□□□□□ -1.86
NPHS1O60500 Y_RNA.292-201ENST00000364904 97 ntBASIC3.46□□□□□ -1.86
NPHS1O60500 Y_RNA.383-201ENST00000383855 97 ntBASIC3.46□□□□□ -1.86
NPHS1O60500 CYCSP48-201ENST00000417124 323 ntBASIC3.46□□□□□ -1.86
NPHS1O60500 AC007395.1-201ENST00000451333 677 ntBASIC3.46□□□□□ -1.86
NPHS1O60500 RNU7-23P-201ENST00000459465 62 ntBASIC3.46□□□□□ -1.86
NPHS1O60500 AC091179.3-201ENST00000474761 144 ntBASIC3.46□□□□□ -1.86
NPHS1O60500 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC3.46□□□□□ -1.86
NPHS1O60500 AP002392.1-201ENST00000537692 208 ntBASIC3.46□□□□□ -1.86
NPHS1O60500 AC018448.1-201ENST00000552843 316 ntBASIC3.46□□□□□ -1.86
NPHS1O60500 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC3.46□□□□□ -1.86
NPHS1O60500 RPS15AP11-201ENST00000594193 385 ntBASIC3.46□□□□□ -1.86
NPHS1O60500 AC022441.3-201ENST00000605737 136 ntBASIC3.46□□□□□ -1.86
NPHS1O60500 AC069200.1-201ENST00000609511 323 ntBASIC3.46□□□□□ -1.86
NPHS1O60500 AL138880.2-201ENST00000616214 239 ntBASIC3.46□□□□□ -1.86
NPHS1O60500 AL590240.4-201ENST00000616908 390 ntBASIC3.46□□□□□ -1.86
NPHS1O60500 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC3.46□□□□□ -1.86
NPHS1O60500 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
NPHS1O60500 RNA5SP196-201ENST00000625967 102 ntBASIC3.46□□□□□ -1.86
NPHS1O60500 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.46□□□□□ -1.86
NPHS1O60500 MIR7153-201ENST00000637758 57 ntBASIC3.46□□□□□ -1.86
NPHS1O60500 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
NPHS1O60500 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC3.46□□□□□ -1.86
NPHS1O60500 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
NPHS1O60500 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.45□□□□□ -1.86
NPHS1O60500 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC3.45□□□□□ -1.86
NPHS1O60500 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
NPHS1O60500 Y_RNA.136-201ENST00000363444 102 ntBASIC3.45□□□□□ -1.86
NPHS1O60500 RNU6-727P-201ENST00000363592 107 ntBASIC3.45□□□□□ -1.86
NPHS1O60500 RNU4-56P-201ENST00000364700 142 ntBASIC3.45□□□□□ -1.86
NPHS1O60500 RNU6-793P-201ENST00000384233 104 ntBASIC3.45□□□□□ -1.86
NPHS1O60500 RNU6-378P-201ENST00000384324 107 ntBASIC3.45□□□□□ -1.86
NPHS1O60500 RNA5SP252-201ENST00000391131 119 ntBASIC3.45□□□□□ -1.86
NPHS1O60500 CBX3P9-201ENST00000402326 552 ntBASIC3.45□□□□□ -1.86
NPHS1O60500 Y_RNA.590-201ENST00000410140 107 ntBASIC3.45□□□□□ -1.86
NPHS1O60500 RNU2-61P-201ENST00000411069 191 ntBASIC3.45□□□□□ -1.86
NPHS1O60500 RPL23AP36-201ENST00000413895 458 ntBASIC3.45□□□□□ -1.86
NPHS1O60500 NDUFB4P10-201ENST00000452541 359 ntBASIC3.45□□□□□ -1.86
NPHS1O60500 RNU7-120P-201ENST00000459334 63 ntBASIC3.45□□□□□ -1.86
NPHS1O60500 AP002884.2-201ENST00000471647 395 ntBASIC3.45□□□□□ -1.86
NPHS1O60500 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.45□□□□□ -1.86
NPHS1O60500 MIR2276-201ENST00000516886 89 ntBASIC3.45□□□□□ -1.86
NPHS1O60500 AC007224.1-201ENST00000564410 144 ntBASIC3.45□□□□□ -1.86
NPHS1O60500 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC3.45□□□□□ -1.86
NPHS1O60500 AC011921.3-201ENST00000605540 361 ntBASIC3.45□□□□□ -1.86
NPHS1O60500 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC3.45□□□□□ -1.86
NPHS1O60500 HOTTIP_4.1-201ENST00000618195 165 ntBASIC3.45□□□□□ -1.86
NPHS1O60500 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC3.45□□□□□ -1.86
NPHS1O60500 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
NPHS1O60500 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.45□□□□□ -1.86
NPHS1O60500 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
NPHS1O60500 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC3.44□□□□□ -1.86
NPHS1O60500 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
NPHS1O60500 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.44□□□□□ -1.86
NPHS1O60500 AC093908.1-201ENST00000623125 8092 ntBASIC3.44□□□□□ -1.86
NPHS1O60500 Y_RNA.101-201ENST00000363154 102 ntBASIC3.44□□□□□ -1.86
NPHS1O60500 RNU5F-3P-201ENST00000363767 117 ntBASIC3.44□□□□□ -1.86
NPHS1O60500 SNORA72.2-201ENST00000365028 127 ntBASIC3.44□□□□□ -1.86
NPHS1O60500 RNA5SP283-201ENST00000365604 119 ntBASIC3.44□□□□□ -1.86
NPHS1O60500 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC3.44□□□□□ -1.86
NPHS1O60500 RNU6-245P-201ENST00000384020 107 ntBASIC3.44□□□□□ -1.86
NPHS1O60500 Y_RNA.498-201ENST00000384460 102 ntBASIC3.44□□□□□ -1.86
NPHS1O60500 AL512633.1-201ENST00000399931 655 ntBASIC3.44□□□□□ -1.86
NPHS1O60500 ELOCP21-201ENST00000412558 336 ntBASIC3.44□□□□□ -1.86
NPHS1O60500 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC3.44□□□□□ -1.86
NPHS1O60500 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC3.44□□□□□ -1.86
NPHS1O60500 RAB28P5-201ENST00000427490 651 ntBASIC3.44□□□□□ -1.86
NPHS1O60500 AC009237.7-201ENST00000447357 229 ntBASIC3.44□□□□□ -1.86
NPHS1O60500 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.44□□□□□ -1.86
NPHS1O60500 RPL7P49-201ENST00000471402 708 ntBASIC3.44□□□□□ -1.86
NPHS1O60500 AC103975.1-201ENST00000482506 483 ntBASIC3.44□□□□□ -1.86
NPHS1O60500 AC074133.1-201ENST00000515696 183 ntBASIC3.44□□□□□ -1.86
NPHS1O60500 Y_RNA.679-201ENST00000516416 91 ntBASIC3.44□□□□□ -1.86
NPHS1O60500 SNORA27.4-201ENST00000516650 95 ntBASIC3.44□□□□□ -1.86
NPHS1O60500 CYCSP23-201ENST00000519781 313 ntBASIC3.44□□□□□ -1.86
NPHS1O60500 MIR3923-201ENST00000579521 83 ntBASIC3.44□□□□□ -1.86
NPHS1O60500 MIR4282-201ENST00000583613 67 ntBASIC3.44□□□□□ -1.86
NPHS1O60500 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC3.44□□□□□ -1.86
NPHS1O60500 AL162713.1-201ENST00000604480 262 ntBASIC3.44□□□□□ -1.86
NPHS1O60500 AL034555.1-201ENST00000604816 211 ntBASIC3.44□□□□□ -1.86
NPHS1O60500 RNU6-91P-201ENST00000607774 107 ntBASIC3.44□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 187.3 ms